RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 GOLGA1Q92805 767 aa11.1□□□□□ -0.63
PTPRA-202ENST00000318266 MPHOSPH8Q99549 860 aa11.1□□□□□ -0.63
PTPRA-202ENST00000318266 SOS2Q07890 1332 aaPredicted RBP11.1□□□□□ -0.63
PTPRA-202ENST00000318266 LRRC37A3O60309 1634 aa11.1□□□□□ -0.63
PTPRA-202ENST00000318266 NEURL1BA8MQ27 555 aa11.1□□□□□ -0.63
PTPRA-202ENST00000318266 TUBB4AP04350 444 aa11.1□□□□□ -0.63
PTPRA-202ENST00000318266 RHOXF2BP0C7M4 288 aa11.1□□□□□ -0.63
PTPRA-202ENST00000318266 PTPN12Q05209 780 aaKnown RBP11.1□□□□□ -0.63
PTPRA-202ENST00000318266 PDE4BQ07343 736 aa11.1□□□□□ -0.63
PTPRA-202ENST00000318266 AXDND1Q5T1B0 1012 aaPredicted RBP11.1□□□□□ -0.63
PTPRA-202ENST00000318266 OLFM4Q6UX06 510 aa11.1□□□□□ -0.63
PTPRA-202ENST00000318266 LEKR1Q6ZMV7 388 aa11.1□□□□□ -0.63
PTPRA-202ENST00000318266 COPS6Q7L5N1 327 aa11.1□□□□□ -0.63
PTPRA-202ENST00000318266 TMEM139Q8IV31 216 aa11.1□□□□□ -0.63
PTPRA-202ENST00000318266 KBTBD3Q8NAB2 608 aa11.1□□□□□ -0.63
PTPRA-202ENST00000318266 RHOXF2Q9BQY4 288 aa11.1□□□□□ -0.63
PTPRA-202ENST00000318266 GCKRQ14397 625 aa11.09□□□□□ -0.63
PTPRA-202ENST00000318266 SRLQ86TD4 932 aa11.09□□□□□ -0.63
PTPRA-202ENST00000318266 FBXO18Q8NFZ0 1043 aa11.09□□□□□ -0.63
PTPRA-202ENST00000318266 CHMP4CQ96CF2 233 aa11.09□□□□□ -0.63
PTPRA-202ENST00000318266 MRPL44Q9H9J2 332 aaKnown RBP11.09□□□□□ -0.63
PTPRA-202ENST00000318266 POLR3EQ9NVU0 708 aa11.09□□□□□ -0.63
PTPRA-202ENST00000318266 IKBKBO14920 756 aa11.09□□□□□ -0.63
PTPRA-202ENST00000318266 YEATS4O95619 227 aa11.09□□□□□ -0.63
PTPRA-202ENST00000318266 C1orf167Q5SNV9 1468 aa11.09□□□□□ -0.63
PTPRA-202ENST00000318266 GOLGA5Q8TBA6 731 aa11.09□□□□□ -0.63
PTPRA-202ENST00000318266 CCDC102AQ96A19 550 aa11.09□□□□□ -0.63
PTPRA-202ENST00000318266 HAUS7Q99871 368 aa11.09□□□□□ -0.63
PTPRA-202ENST00000318266 TOMM22Q9NS69 142 aa11.09□□□□□ -0.63
PTPRA-202ENST00000318266 RNF216Q9NWF9 866 aaPredicted RBP11.09□□□□□ -0.63
PTPRA-202ENST00000318266 FMN2Q9NZ56 1722 aa11.09□□□□□ -0.63
PTPRA-202ENST00000318266 RNMTO43148 476 aaKnown RBP11.09□□□□□ -0.63
PTPRA-202ENST00000318266 CHMP4BP1P59074 171 aa11.09□□□□□ -0.63
PTPRA-202ENST00000318266 RSRC2Q7L4I2 434 aaKnown RBP11.09□□□□□ -0.63
PTPRA-202ENST00000318266 QTRT2Q9H974 415 aaKnown RBP11.09□□□□□ -0.63
PTPRA-202ENST00000318266 PAG1Q9NWQ8 432 aa11.09□□□□□ -0.63
PTPRA-202ENST00000318266 FAN1Q9Y2M0 1017 aa11.09□□□□□ -0.63
PTPRA-202ENST00000318266 PCDHA5Q9Y5H7 936 aa11.09□□□□□ -0.63
PTPRA-202ENST00000318266 PTPRUQ92729 1446 aa11.08□□□□□ -0.64
PTPRA-202ENST00000318266 SOWAHDA6NJG2 315 aa11.08□□□□□ -0.64
PTPRA-202ENST00000318266 DHX16O60231 1041 aaKnown RBP11.08□□□□□ -0.64
PTPRA-202ENST00000318266 CMA1P23946 247 aa11.08□□□□□ -0.64
PTPRA-202ENST00000318266 ACTN2P35609 894 aa11.08□□□□□ -0.64
PTPRA-202ENST00000318266 TXLNAP40222 546 aa11.08□□□□□ -0.64
PTPRA-202ENST00000318266 IRX3P78415 501 aaPredicted RBP11.08□□□□□ -0.64
PTPRA-202ENST00000318266 FOXP4Q8IVH2 680 aaPredicted RBP11.08□□□□□ -0.64
PTPRA-202ENST00000318266 RABGGTAQ92696 567 aa11.08□□□□□ -0.64
PTPRA-202ENST00000318266 ATP8B1O43520 1251 aa11.08□□□□□ -0.64
PTPRA-202ENST00000318266 FKBP4Q02790 459 aaKnown RBP eCLIP11.08□□□□□ -0.64
PTPRA-202ENST00000318266 WASHC4Q2M389 1173 aa11.08□□□□□ -0.64
PTPRA-202ENST00000318266 LONRF3Q496Y0 759 aa11.08□□□□□ -0.64
PTPRA-202ENST00000318266 AKAP4Q5JQC9 854 aa11.08□□□□□ -0.64
PTPRA-202ENST00000318266 SHC4Q6S5L8 630 aa11.08□□□□□ -0.64
PTPRA-202ENST00000318266 CNNM3Q8NE01 707 aa11.08□□□□□ -0.64
PTPRA-202ENST00000318266 EXOC4Q96A65 974 aa11.08□□□□□ -0.64
PTPRA-202ENST00000318266 KIFC2Q96AC6 838 aa11.08□□□□□ -0.64
PTPRA-202ENST00000318266 ZNF274Q96GC6 653 aaPredicted RBP11.08□□□□□ -0.64
PTPRA-202ENST00000318266 MAST3O60307 1309 aa11.07□□□□□ -0.64
PTPRA-202ENST00000318266 PRC1O43663 620 aa11.07□□□□□ -0.64
PTPRA-202ENST00000318266 KIF23Q02241 960 aaPredicted RBP11.07□□□□□ -0.64
PTPRA-202ENST00000318266 JAKMIP3Q5VZ66 844 aa11.07□□□□□ -0.64
PTPRA-202ENST00000318266 LMOD2Q6P5Q4 547 aa11.07□□□□□ -0.64
PTPRA-202ENST00000318266 TC2NQ8N9U0 490 aa11.07□□□□□ -0.64
PTPRA-202ENST00000318266 PNKPQ96T60 521 aa11.07□□□□□ -0.64
PTPRA-202ENST00000318266 DDX21Q9NR30 783 aaKnown RBP eCLIP11.07□□□□□ -0.64
PTPRA-202ENST00000318266 NFE2L3Q9Y4A8 694 aa11.07□□□□□ -0.64
PTPRA-202ENST00000318266 PLEKHO1Q53GL0 409 aaPredicted RBP11.07□□□□□ -0.64
PTPRA-202ENST00000318266 METTL16Q86W50 562 aaKnown RBP11.07□□□□□ -0.64
PTPRA-202ENST00000318266 GRAMD1CQ8IYS0 662 aa11.07□□□□□ -0.64
PTPRA-202ENST00000318266 PHKBQ93100 1093 aa11.07□□□□□ -0.64
PTPRA-202ENST00000318266 UBE2Q2LH0YL09 131 aa11.07□□□□□ -0.64
PTPRA-202ENST00000318266 M0R2C6 588 aa11.07□□□□□ -0.64
PTPRA-202ENST00000318266 BMP6P22004 513 aa11.07□□□□□ -0.64
PTPRA-202ENST00000318266 DHX8Q14562 1220 aaKnown RBP11.07□□□□□ -0.64
PTPRA-202ENST00000318266 DENND2AQ9ULE3 1009 aa11.07□□□□□ -0.64
PTPRA-202ENST00000318266 A0A087WZG4 1122 aa11.06□□□□□ -0.64
PTPRA-202ENST00000318266 CCDC151A5D8V7 595 aa11.06□□□□□ -0.64
PTPRA-202ENST00000318266 ATP2B1P20020 1258 aa11.06□□□□□ -0.64
PTPRA-202ENST00000318266 FMR1Q06787 632 aaKnown RBP eCLIP11.06□□□□□ -0.642e-6■■■■□ 22.7
PTPRA-202ENST00000318266 PDIA6Q15084 440 aa11.06□□□□□ -0.64
PTPRA-202ENST00000318266 KIF4BQ2VIQ3 1234 aa11.06□□□□□ -0.64
PTPRA-202ENST00000318266 LMBR1LQ6UX01 489 aa11.06□□□□□ -0.64
PTPRA-202ENST00000318266 ABCB6Q9NP58 842 aa11.06□□□□□ -0.64
PTPRA-202ENST00000318266 COPRSQ9NQ92 184 aa11.06□□□□□ -0.64
PTPRA-202ENST00000318266 DISP2A7MBM2 1401 aa11.06□□□□□ -0.64
PTPRA-202ENST00000318266 N4BP2Q86UW6 1770 aaPredicted RBP11.06□□□□□ -0.64
PTPRA-202ENST00000318266 ZNF569Q5MCW4 686 aa11.06□□□□□ -0.64
PTPRA-202ENST00000318266 SPECC1LQ69YQ0 1117 aa11.06□□□□□ -0.64
PTPRA-202ENST00000318266 VPS37DQ86XT2 251 aa11.06□□□□□ -0.64
PTPRA-202ENST00000318266 AGXT2Q9BYV1 514 aa11.06□□□□□ -0.64
PTPRA-202ENST00000318266 SAMSN1Q9NSI8 373 aaKnown RBP11.06□□□□□ -0.64
PTPRA-202ENST00000318266 ATG3Q9NT62 314 aa11.06□□□□□ -0.64
PTPRA-202ENST00000318266 NCAPD2Q15021 1401 aa11.05□□□□□ -0.64
PTPRA-202ENST00000318266 RFX5P48382 616 aaPredicted RBP11.05□□□□□ -0.64
PTPRA-202ENST00000318266 GTF2A1P52655 376 aaPredicted RBP11.05□□□□□ -0.64
PTPRA-202ENST00000318266 SLC39A14Q15043 492 aa11.05□□□□□ -0.64
PTPRA-202ENST00000318266 KLHL10Q6JEL2 608 aa11.05□□□□□ -0.64
PTPRA-202ENST00000318266 BRAPQ7Z569 592 aa11.05□□□□□ -0.64
PTPRA-202ENST00000318266 DSCC1Q9BVC3 393 aa11.05□□□□□ -0.64
PTPRA-202ENST00000318266 ANKZF1Q9H8Y5 726 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms