RNA–Protein interactions for RNA: ENST00000313663.11

C2CD3-201, Transcript of C2 calcium dependent domain containing 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C2CD3, Length 6,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-201ENST00000313663 TMC6Q7Z403 805 aa10.12□□□□□ -0.79
C2CD3-201ENST00000313663 CCDC77Q9BR77 488 aa10.12□□□□□ -0.79
C2CD3-201ENST00000313663 JADE2Q9NQC1 790 aa10.12□□□□□ -0.79
C2CD3-201ENST00000313663 NDC80O14777 642 aa10.12□□□□□ -0.79
C2CD3-201ENST00000313663 CALM1P0DP23 149 aa10.12□□□□□ -0.79
C2CD3-201ENST00000313663 CALM2P0DP24 149 aa10.12□□□□□ -0.79
C2CD3-201ENST00000313663 CALM3P0DP25 149 aa10.12□□□□□ -0.79
C2CD3-201ENST00000313663 KCNG4Q8TDN1 519 aa10.12□□□□□ -0.79
C2CD3-201ENST00000313663 CEP63Q96MT8 703 aa10.12□□□□□ -0.79
C2CD3-201ENST00000313663 USP25Q9UHP3 1055 aa10.12□□□□□ -0.79
C2CD3-201ENST00000313663 MCM9Q9NXL9 1143 aa10.12□□□□□ -0.79
C2CD3-201ENST00000313663 CEP83Q9Y592 693 aa10.12□□□□□ -0.79
C2CD3-201ENST00000313663 GNA11P29992 359 aa10.11□□□□□ -0.79
C2CD3-201ENST00000313663 PPFIA3O75145 1194 aa10.11□□□□□ -0.79
C2CD3-201ENST00000313663 GNAT2P19087 354 aa10.11□□□□□ -0.79
C2CD3-201ENST00000313663 CKAP4Q07065 602 aaKnown RBP10.11□□□□□ -0.79
C2CD3-201ENST00000313663 C6orf163Q5TEZ5 329 aa10.11□□□□□ -0.79
C2CD3-201ENST00000313663 SMC5Q8IY18 1101 aa10.11□□□□□ -0.79
C2CD3-201ENST00000313663 KIAA1524Q8TCG1 905 aa10.11□□□□□ -0.79
C2CD3-201ENST00000313663 ZFP91Q96JP5 570 aaPredicted RBP10.11□□□□□ -0.79
C2CD3-201ENST00000313663 LARP6Q9BRS8 491 aaKnown RBP10.11□□□□□ -0.79
C2CD3-201ENST00000313663 GTPBP4Q9BZE4 634 aaKnown RBP10.11□□□□□ -0.79
C2CD3-201ENST00000313663 LTN1O94822 1766 aa10.11□□□□□ -0.79
C2CD3-201ENST00000313663 MRPS9P82933 396 aaKnown RBP10.11□□□□□ -0.79
C2CD3-201ENST00000313663 RRAGBQ5VZM2 374 aa10.11□□□□□ -0.79
C2CD3-201ENST00000313663 ANKRD2Q9GZV1 360 aa10.11□□□□□ -0.79
C2CD3-201ENST00000313663 TRMT1Q9NXH9 659 aaKnown RBP10.11□□□□□ -0.79
C2CD3-201ENST00000313663 PLCB3Q01970 1234 aa10.11□□□□□ -0.79
C2CD3-201ENST00000313663 MICALCLQ6ZW33 695 aa10.11□□□□□ -0.79
C2CD3-201ENST00000313663 FBF1Q8TES7 1133 aa10.11□□□□□ -0.79
C2CD3-201ENST00000313663 APBB1IPQ7Z5R6 666 aaPredicted RBP10.1□□□□□ -0.79
C2CD3-201ENST00000313663 GDPD2Q9HCC8 539 aa10.1□□□□□ -0.79
C2CD3-201ENST00000313663 STK32BQ9NY57 414 aa10.1□□□□□ -0.79
C2CD3-201ENST00000313663 CHPF2Q9P2E5 772 aa10.1□□□□□ -0.79
C2CD3-201ENST00000313663 IVNS1ABPQ9Y6Y0 642 aa10.1□□□□□ -0.79
C2CD3-201ENST00000313663 CEMIPQ8WUJ3 1361 aa10.1□□□□□ -0.79
C2CD3-201ENST00000313663 CCDC155Q8N6L0 562 aa10.1□□□□□ -0.79
C2CD3-201ENST00000313663 CEP112Q8N8E3 955 aa10.1□□□□□ -0.79
C2CD3-201ENST00000313663 CTAGE1Q96RT6 745 aa10.1□□□□□ -0.79
C2CD3-201ENST00000313663 LGR6Q9HBX8 967 aa10.1□□□□□ -0.79
C2CD3-201ENST00000313663 PLCD3Q8N3E9 789 aa10.1□□□□□ -0.79
C2CD3-201ENST00000313663 OTUD6BQ8N6M0 293 aa10.1□□□□□ -0.79
C2CD3-201ENST00000313663 MRVI1Q9Y6F6 885 aa10.1□□□□□ -0.79
C2CD3-201ENST00000313663 LDHBP07195 334 aaKnown RBP10.1□□□□□ -0.79
C2CD3-201ENST00000313663 GNG11P61952 73 aa10.1□□□□□ -0.79
C2CD3-201ENST00000313663 C8orf34Q49A92 452 aa10.1□□□□□ -0.79
C2CD3-201ENST00000313663 MCMDC2Q4G0Z9 681 aa10.1□□□□□ -0.79
C2CD3-201ENST00000313663 TICAM2Q86XR7 235 aa10.1□□□□□ -0.79
C2CD3-201ENST00000313663 MAATS1Q7Z4T9 603 aa10.1□□□□□ -0.79
C2CD3-201ENST00000313663 UBE2HP62256 183 aa10.09□□□□□ -0.79
C2CD3-201ENST00000313663 AFMP43652 599 aa10.09□□□□□ -0.79
C2CD3-201ENST00000313663 TTC12Q9H892 705 aaPredicted RBP10.09□□□□□ -0.79
C2CD3-201ENST00000313663 SSFA2P28290 1259 aa10.09□□□□□ -0.79
C2CD3-201ENST00000313663 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.09□□□□□ -0.79
C2CD3-201ENST00000313663 TRPM3Q9HCF6 1732 aaPredicted RBP10.09□□□□□ -0.79
C2CD3-201ENST00000313663 MAGEB6P1A0A0J9YX57 407 aa10.09□□□□□ -0.79
C2CD3-201ENST00000313663 FAM13AO94988 1023 aa10.09□□□□□ -0.79
C2CD3-201ENST00000313663 TBC1D9Q6ZT07 1266 aa10.09□□□□□ -0.79
C2CD3-201ENST00000313663 TNPO1Q92973 898 aaKnown RBP10.09□□□□□ -0.79
C2CD3-201ENST00000313663 RRP36Q96EU6 259 aaKnown RBP10.09□□□□□ -0.79
C2CD3-201ENST00000313663 PHRF1Q9P1Y6 1649 aaKnown RBP10.09□□□□□ -0.79
C2CD3-201ENST00000313663 IRS4O14654 1257 aaPredicted RBP10.09□□□□□ -0.79
C2CD3-201ENST00000313663 SLU7O95391 586 aaKnown RBP10.09□□□□□ -0.79
C2CD3-201ENST00000313663 SRRTQ9BXP5 876 aaKnown RBP10.09□□□□□ -0.79
C2CD3-201ENST00000313663 GPHNQ9NQX3 736 aaPredicted RBP10.09□□□□□ -0.79
C2CD3-201ENST00000313663 ISM2Q6H9L7 571 aa10.08□□□□□ -0.8
C2CD3-201ENST00000313663 C16orf45Q96MC5 204 aaPredicted RBP10.08□□□□□ -0.8
C2CD3-201ENST00000313663 STRCP1A6NGW2 1772 aa10.08□□□□□ -0.8
C2CD3-201ENST00000313663 TTC22Q5TAA0 569 aa10.08□□□□□ -0.8
C2CD3-201ENST00000313663 MRPS27Q92552 414 aaKnown RBP10.08□□□□□ -0.8
C2CD3-201ENST00000313663 TCEANC2Q96MN5 208 aa10.08□□□□□ -0.8
C2CD3-201ENST00000313663 MEIS3Q99687 375 aa10.08□□□□□ -0.8
C2CD3-201ENST00000313663 SELENOOQ9BVL4 669 aa10.08□□□□□ -0.8
C2CD3-201ENST00000313663 FAM107BQ9H098 131 aa10.08□□□□□ -0.8
C2CD3-201ENST00000313663 RBM8AQ9Y5S9 174 aaKnown RBP10.08□□□□□ -0.8
C2CD3-201ENST00000313663 RNMTO43148 476 aaKnown RBP10.08□□□□□ -0.8
C2CD3-201ENST00000313663 RFX1P22670 979 aa10.08□□□□□ -0.8
C2CD3-201ENST00000313663 G2E3Q7L622 706 aa10.08□□□□□ -0.8
C2CD3-201ENST00000313663 FAM212AQ96EL1 285 aa10.08□□□□□ -0.8
C2CD3-201ENST00000313663 DCAF5Q96JK2 942 aa10.08□□□□□ -0.8
C2CD3-201ENST00000313663 TMX1Q9H3N1 280 aa10.08□□□□□ -0.8
C2CD3-201ENST00000313663 NCAPD2Q15021 1401 aa10.08□□□□□ -0.8
C2CD3-201ENST00000313663 A0A1W2PRG0 241 aa10.08□□□□□ -0.8
C2CD3-201ENST00000313663 HOXB7P09629 217 aa10.08□□□□□ -0.8
C2CD3-201ENST00000313663 TRAPPC3LQ5T215 181 aa10.08□□□□□ -0.8
C2CD3-201ENST00000313663 CDCA7Q9BWT1 371 aaPredicted RBP10.08□□□□□ -0.8
C2CD3-201ENST00000313663 TXNDC16Q9P2K2 825 aa10.08□□□□□ -0.8
C2CD3-201ENST00000313663 CNBD1Q8NA66 436 aa10.08□□□□□ -0.8
C2CD3-201ENST00000313663 HELBQ8NG08 1087 aaPredicted RBP10.08□□□□□ -0.8
C2CD3-201ENST00000313663 RNF187Q5TA31 235 aaPredicted RBP10.07□□□□□ -0.8
C2CD3-201ENST00000313663 LMBR1Q8WVP7 490 aa10.07□□□□□ -0.8
C2CD3-201ENST00000313663 LRRC2Q9BYS8 371 aa10.07□□□□□ -0.8
C2CD3-201ENST00000313663 MED1Q15648 1581 aaPredicted RBP10.07□□□□□ -0.8
C2CD3-201ENST00000313663 ECM2O94769 699 aaPredicted RBP10.07□□□□□ -0.8
C2CD3-201ENST00000313663 EEF2P13639 858 aaKnown RBP10.07□□□□□ -0.8
C2CD3-201ENST00000313663 UBASH3AP57075 661 aa10.07□□□□□ -0.8
C2CD3-201ENST00000313663 SLC8A3P57103 927 aa10.07□□□□□ -0.8
C2CD3-201ENST00000313663 SP4Q02446 784 aa10.07□□□□□ -0.8
C2CD3-201ENST00000313663 TSHZ3Q63HK5 1081 aa10.07□□□□□ -0.8
C2CD3-201ENST00000313663 HOOK2Q96ED9 719 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms