RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 COA1Q9GZY4 146 aa19.72■□□□□ 0.75
CLCF1-201ENST00000312438 TRAK2O60296 914 aa19.72■□□□□ 0.75
CLCF1-201ENST00000312438 LDHCP07864 332 aa19.72■□□□□ 0.75
CLCF1-201ENST00000312438 PDIA3P30101 505 aaKnown RBP19.72■□□□□ 0.75
CLCF1-201ENST00000312438 CTDSPL2Q05D32 466 aa19.72■□□□□ 0.75
CLCF1-201ENST00000312438 FOXD4L5Q5VV16 416 aaPredicted RBP19.72■□□□□ 0.75
CLCF1-201ENST00000312438 DPP8Q6V1X1 898 aaPredicted RBP19.72■□□□□ 0.75
CLCF1-201ENST00000312438 FOXD4L4Q8WXT5 416 aaPredicted RBP19.72■□□□□ 0.75
CLCF1-201ENST00000312438 CRNKL1Q9BZJ0 848 aaKnown RBP19.72■□□□□ 0.75
CLCF1-201ENST00000312438 RNF41Q9H4P4 317 aaPredicted RBP19.72■□□□□ 0.75
CLCF1-201ENST00000312438 AATFQ9NY61 560 aaKnown RBP eCLIP19.72■□□□□ 0.75
CLCF1-201ENST00000312438 ANAPC4Q9UJX5 808 aa19.72■□□□□ 0.75
CLCF1-201ENST00000312438 ZSCAN22P10073 491 aaPredicted RBP19.71■□□□□ 0.75
CLCF1-201ENST00000312438 PPARAQ07869 468 aa19.71■□□□□ 0.75
CLCF1-201ENST00000312438 SKOR2Q2VWA4 1001 aaPredicted RBP19.71■□□□□ 0.75
CLCF1-201ENST00000312438 LARP1BQ659C4 914 aaKnown RBP19.71■□□□□ 0.75
CLCF1-201ENST00000312438 TBC1D22AQ8WUA7 517 aa19.71■□□□□ 0.75
CLCF1-201ENST00000312438 TMEM87BQ96K49 555 aa19.71■□□□□ 0.75
CLCF1-201ENST00000312438 B4E1Z4 1266 aa19.7■□□□□ 0.74
CLCF1-201ENST00000312438 MCTP1Q6DN14 999 aa19.7■□□□□ 0.74
CLCF1-201ENST00000312438 CNKSR1Q969H4 720 aa19.7■□□□□ 0.74
CLCF1-201ENST00000312438 ATP8A2Q9NTI2 1148 aa19.7■□□□□ 0.74
CLCF1-201ENST00000312438 CACNA1SQ13698 1873 aa19.7■□□□□ 0.74
CLCF1-201ENST00000312438 CYB5R4Q7L1T6 521 aa19.69■□□□□ 0.74
CLCF1-201ENST00000312438 CCDC125Q86Z20 511 aa19.69■□□□□ 0.74
CLCF1-201ENST00000312438 ANGEL1Q9UNK9 670 aaKnown RBP19.69■□□□□ 0.74
CLCF1-201ENST00000312438 NEDD4P46934 1319 aa19.69■□□□□ 0.74
CLCF1-201ENST00000312438 BAG3O95817 575 aa19.69■□□□□ 0.74
CLCF1-201ENST00000312438 SLC16A10Q8TF71 515 aa19.69■□□□□ 0.74
CLCF1-201ENST00000312438 EYA3Q99504 573 aa19.69■□□□□ 0.74
CLCF1-201ENST00000312438 INCENPQ9NQS7 918 aa19.69■□□□□ 0.74
CLCF1-201ENST00000312438 GPHNQ9NQX3 736 aaPredicted RBP19.69■□□□□ 0.74
CLCF1-201ENST00000312438 ZSWIM5Q9P217 1185 aa19.69■□□□□ 0.74
CLCF1-201ENST00000312438 NAP1L2Q9ULW6 460 aaPredicted RBP19.69■□□□□ 0.74
CLCF1-201ENST00000312438 ATP6V1DQ9Y5K8 247 aa19.69■□□□□ 0.74
CLCF1-201ENST00000312438 ANKRD31Q8N7Z5 1873 aa19.69■□□□□ 0.74
CLCF1-201ENST00000312438 FAM205AQ6ZU69 1335 aa19.68■□□□□ 0.74
CLCF1-201ENST00000312438 MINDY4BA8MYZ0 360 aa19.68■□□□□ 0.74
CLCF1-201ENST00000312438 RIMBP2O15034 1052 aa19.68■□□□□ 0.74
CLCF1-201ENST00000312438 SMARCC2Q8TAQ2 1214 aa19.68■□□□□ 0.74
CLCF1-201ENST00000312438 MTA3Q9BTC8 594 aa19.68■□□□□ 0.74
CLCF1-201ENST00000312438 MTMR6Q9Y217 621 aa19.68■□□□□ 0.74
CLCF1-201ENST00000312438 PPP4CP60510 307 aa19.67■□□□□ 0.74
CLCF1-201ENST00000312438 CCT2P78371 535 aaKnown RBP19.67■□□□□ 0.74
CLCF1-201ENST00000312438 OLFM4Q6UX06 510 aa19.67■□□□□ 0.74
CLCF1-201ENST00000312438 CERS3Q8IU89 383 aa19.67■□□□□ 0.74
CLCF1-201ENST00000312438 IGDCC4Q8TDY8 1250 aa19.67■□□□□ 0.74
CLCF1-201ENST00000312438 NOL10Q9BSC4 688 aaKnown RBP19.67■□□□□ 0.74
CLCF1-201ENST00000312438 BRPF3Q9ULD4 1205 aa19.67■□□□□ 0.74
CLCF1-201ENST00000312438 TACC3Q9Y6A5 838 aa19.67■□□□□ 0.74
CLCF1-201ENST00000312438 KLF18A0A0U1RQI7 1052 aa19.67■□□□□ 0.74
CLCF1-201ENST00000312438 SH2B2O14492 632 aaPredicted RBP19.67■□□□□ 0.74
CLCF1-201ENST00000312438 DHX16O60231 1041 aaKnown RBP19.67■□□□□ 0.74
CLCF1-201ENST00000312438 KDM4AO75164 1064 aa19.67■□□□□ 0.74
CLCF1-201ENST00000312438 F13A1P00488 732 aa19.67■□□□□ 0.74
CLCF1-201ENST00000312438 PCP11498 1178 aaKnown RBP19.67■□□□□ 0.74
CLCF1-201ENST00000312438 HMGN5P82970 282 aaKnown RBP19.67■□□□□ 0.74
CLCF1-201ENST00000312438 GRIK5Q16478 980 aa19.67■□□□□ 0.74
CLCF1-201ENST00000312438 MFSD14BQ5SR56 506 aa19.67■□□□□ 0.74
CLCF1-201ENST00000312438 CTR9Q6PD62 1173 aa19.67■□□□□ 0.74
CLCF1-201ENST00000312438 SLF2Q8IX21 1173 aa19.67■□□□□ 0.74
CLCF1-201ENST00000312438 DCP1AQ9NPI6 582 aaPredicted RBP19.67■□□□□ 0.74
CLCF1-201ENST00000312438 DTNBO60941 627 aa19.66■□□□□ 0.74
CLCF1-201ENST00000312438 CHRNA5P30532 468 aa19.66■□□□□ 0.74
CLCF1-201ENST00000312438 GSE1Q14687 1217 aa19.66■□□□□ 0.74
CLCF1-201ENST00000312438 NSUN7Q8NE18 718 aaKnown RBP19.66■□□□□ 0.74
CLCF1-201ENST00000312438 NKX2-3Q8TAU0 364 aa19.66■□□□□ 0.74
CLCF1-201ENST00000312438 TOMM22Q9NS69 142 aa19.66■□□□□ 0.74
CLCF1-201ENST00000312438 LRRC37AA6NMS7 1700 aa19.65■□□□□ 0.74
CLCF1-201ENST00000312438 USP17L12C9JPN9 530 aa19.65■□□□□ 0.74
CLCF1-201ENST00000312438 USP17L21D6R901 530 aa19.65■□□□□ 0.74
CLCF1-201ENST00000312438 JAK2O60674 1132 aa19.65■□□□□ 0.74
CLCF1-201ENST00000312438 LIFRP42702 1097 aa19.65■□□□□ 0.74
CLCF1-201ENST00000312438 GTF2IP78347 998 aa19.65■□□□□ 0.74
CLCF1-201ENST00000312438 SBK1Q52WX2 424 aa19.65■□□□□ 0.74
CLCF1-201ENST00000312438 FAM184AQ8NB25 1140 aa19.65■□□□□ 0.74
CLCF1-201ENST00000312438 FAM163AQ96GL9 167 aaPredicted RBP19.65■□□□□ 0.74
CLCF1-201ENST00000312438 PDGFDQ9GZP0 370 aaPredicted RBP19.65■□□□□ 0.74
CLCF1-201ENST00000312438 SUGT1Q9Y2Z0 365 aa19.65■□□□□ 0.74
CLCF1-201ENST00000312438 KIF3AQ9Y496 699 aa19.65■□□□□ 0.74
CLCF1-201ENST00000312438 G3V3G9 751 aa19.65■□□□□ 0.74
CLCF1-201ENST00000312438 CTDNEP1O95476 244 aa19.65■□□□□ 0.74
CLCF1-201ENST00000312438 SART3Q15020 963 aaKnown RBP19.65■□□□□ 0.74
CLCF1-201ENST00000312438 DIXDC1Q155Q3 683 aa19.65■□□□□ 0.74
CLCF1-201ENST00000312438 TMEM67Q5HYA8 995 aa19.65■□□□□ 0.74
CLCF1-201ENST00000312438 RRP12Q5JTH9 1297 aaKnown RBP19.65■□□□□ 0.74
CLCF1-201ENST00000312438 DCAF8Q5TAQ9 597 aa19.65■□□□□ 0.74
CLCF1-201ENST00000312438 SGMS1Q86VZ5 419 aa19.65■□□□□ 0.74
CLCF1-201ENST00000312438 ESR2Q92731 530 aa19.65■□□□□ 0.74
CLCF1-201ENST00000312438 LMBRD1Q9NUN5 540 aa19.65■□□□□ 0.74
CLCF1-201ENST00000312438 MROH7-TTC4A0A0A0MT08 1334 aa19.64■□□□□ 0.74
CLCF1-201ENST00000312438 VPS37CA5D8V6 355 aaPredicted RBP19.64■□□□□ 0.73
CLCF1-201ENST00000312438 IFIT3O14879 490 aaKnown RBP19.64■□□□□ 0.73
CLCF1-201ENST00000312438 FGRP09769 529 aa19.64■□□□□ 0.73
CLCF1-201ENST00000312438 TMTC2Q8N394 836 aa19.64■□□□□ 0.73
CLCF1-201ENST00000312438 NCOA5Q9HCD5 579 aaKnown RBP19.64■□□□□ 0.73
CLCF1-201ENST00000312438 ARPP21Q9UBL0 812 aaPredicted RBP19.64■□□□□ 0.73
CLCF1-201ENST00000312438 HPS5Q9UPZ3 1129 aa19.64■□□□□ 0.73
CLCF1-201ENST00000312438 GPR75-ASB3A0A0A6YYF3 556 aa19.63■□□□□ 0.73
CLCF1-201ENST00000312438 GOLGA8BA8MQT2 603 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms