RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 LY9Q9HBG7 655 aa17.69■□□□□ 0.42
SPIRE1-201ENST00000309836 RIOK3O14730 519 aaKnown RBP17.68■□□□□ 0.42
SPIRE1-201ENST00000309836 RASGRF1Q13972 1273 aa17.68■□□□□ 0.42
SPIRE1-201ENST00000309836 AIDAQ96BJ3 306 aa17.68■□□□□ 0.42
SPIRE1-201ENST00000309836 FAM217BQ9NTX9 383 aaPredicted RBP17.68■□□□□ 0.42
SPIRE1-201ENST00000309836 KIAA1468Q9P260 1216 aa17.68■□□□□ 0.42
SPIRE1-201ENST00000309836 FAM177BA6PVY3 158 aa17.67■□□□□ 0.42
SPIRE1-201ENST00000309836 EXOC5O00471 708 aa17.67■□□□□ 0.42
SPIRE1-201ENST00000309836 WDHD1O75717 1129 aaPredicted RBP17.67■□□□□ 0.42
SPIRE1-201ENST00000309836 MBD4O95243 580 aa17.67■□□□□ 0.42
SPIRE1-201ENST00000309836 SLC5A1P13866 664 aa17.67■□□□□ 0.42
SPIRE1-201ENST00000309836 EIF5P55010 431 aaKnown RBP17.67■□□□□ 0.42
SPIRE1-201ENST00000309836 NTRK3Q16288 839 aa17.67■□□□□ 0.42
SPIRE1-201ENST00000309836 KRT40Q6A162 431 aa17.67■□□□□ 0.42
SPIRE1-201ENST00000309836 SYNE3Q6ZMZ3 975 aa17.67■□□□□ 0.42
SPIRE1-201ENST00000309836 PHKBQ93100 1093 aa17.67■□□□□ 0.42
SPIRE1-201ENST00000309836 TMEM87BQ96K49 555 aa17.67■□□□□ 0.42
SPIRE1-201ENST00000309836 AK7Q96M32 723 aa17.67■□□□□ 0.42
SPIRE1-201ENST00000309836 PHLPP1O60346 1717 aa17.67■□□□□ 0.42
SPIRE1-201ENST00000309836 CHD4Q14839 1912 aa17.67■□□□□ 0.42
SPIRE1-201ENST00000309836 RANBP6O60518 1105 aaKnown RBP17.67■□□□□ 0.42
SPIRE1-201ENST00000309836 CDKL5O76039 1030 aa17.67■□□□□ 0.42
SPIRE1-201ENST00000309836 PFKFB1P16118 471 aa17.67■□□□□ 0.42
SPIRE1-201ENST00000309836 SLC39A14Q15043 492 aa17.67■□□□□ 0.42
SPIRE1-201ENST00000309836 DPCR1Q3MIW9 517 aa17.67■□□□□ 0.42
SPIRE1-201ENST00000309836 INTS5Q6P9B9 1019 aaKnown RBP17.67■□□□□ 0.42
SPIRE1-201ENST00000309836 MAGEB6Q8N7X4 407 aa17.67■□□□□ 0.42
SPIRE1-201ENST00000309836 SEC31BQ9NQW1 1179 aa17.67■□□□□ 0.42
SPIRE1-201ENST00000309836 RREB1Q92766 1687 aa17.66■□□□□ 0.42
SPIRE1-201ENST00000309836 PATL2C9JE40 543 aaKnown RBP17.66■□□□□ 0.42
SPIRE1-201ENST00000309836 ZNF202O95125 648 aa17.66■□□□□ 0.42
SPIRE1-201ENST00000309836 CMA1P23946 247 aa17.66■□□□□ 0.42
SPIRE1-201ENST00000309836 CTDSPL2Q05D32 466 aa17.66■□□□□ 0.42
SPIRE1-201ENST00000309836 TMEM67Q5HYA8 995 aa17.66■□□□□ 0.42
SPIRE1-201ENST00000309836 MTERF4Q7Z6M4 381 aaKnown RBP17.66■□□□□ 0.42
SPIRE1-201ENST00000309836 SGMS1Q86VZ5 419 aa17.66■□□□□ 0.42
SPIRE1-201ENST00000309836 MICU3Q86XE3 530 aa17.66■□□□□ 0.42
SPIRE1-201ENST00000309836 VPS37DQ86XT2 251 aa17.66■□□□□ 0.42
SPIRE1-201ENST00000309836 IFNL3Q8IZI9 196 aa17.66■□□□□ 0.42
SPIRE1-201ENST00000309836 MYL10Q9BUA6 226 aa17.66■□□□□ 0.42
SPIRE1-201ENST00000309836 ARMT1Q9H993 441 aa17.66■□□□□ 0.42
SPIRE1-201ENST00000309836 KAT6BQ8WYB5 2073 aa17.65■□□□□ 0.42
SPIRE1-201ENST00000309836 GOLGA8AA7E2F4 631 aa17.65■□□□□ 0.42
SPIRE1-201ENST00000309836 ZBTB43O43298 467 aa17.65■□□□□ 0.42
SPIRE1-201ENST00000309836 MARCKSP29966 332 aaPredicted RBP17.65■□□□□ 0.42
SPIRE1-201ENST00000309836 GLIPR1L2Q4G1C9 344 aa17.65■□□□□ 0.42
SPIRE1-201ENST00000309836 LRRC8AQ8IWT6 810 aa17.65■□□□□ 0.42
SPIRE1-201ENST00000309836 BPIFA3Q9BQP9 254 aa17.65■□□□□ 0.42
SPIRE1-201ENST00000309836 NAT10Q9H0A0 1025 aaKnown RBP17.65■□□□□ 0.42
SPIRE1-201ENST00000309836 BCORQ6W2J9 1755 aa17.65■□□□□ 0.42
SPIRE1-201ENST00000309836 CHAF1AQ13111 956 aaPredicted RBP17.65■□□□□ 0.42
SPIRE1-201ENST00000309836 PTPAQ15257 358 aa17.65■□□□□ 0.42
SPIRE1-201ENST00000309836 NFXL1Q6ZNB6 911 aa17.65■□□□□ 0.42
SPIRE1-201ENST00000309836 BCL2L12Q9HB09 334 aa17.65■□□□□ 0.42
SPIRE1-201ENST00000309836 GSG1L2A8MUP6 293 aa17.64■□□□□ 0.41
SPIRE1-201ENST00000309836 UBE2Q2LH0YL09 131 aa17.64■□□□□ 0.41
SPIRE1-201ENST00000309836 SLC3A2P08195 630 aaKnown RBP17.64■□□□□ 0.41
SPIRE1-201ENST00000309836 NLRP12P59046 1061 aa17.64■□□□□ 0.41
SPIRE1-201ENST00000309836 MAP3K12Q12852 859 aa17.64■□□□□ 0.41
SPIRE1-201ENST00000309836 NBPF11Q86T75 865 aa17.64■□□□□ 0.41
SPIRE1-201ENST00000309836 C16orf45Q96MC5 204 aaPredicted RBP17.64■□□□□ 0.41
SPIRE1-201ENST00000309836 MAP3K14Q99558 947 aa17.64■□□□□ 0.41
SPIRE1-201ENST00000309836 UTP14AQ9BVJ6 771 aaKnown RBP17.64■□□□□ 0.41
SPIRE1-201ENST00000309836 NAPBQ9H115 298 aa17.64■□□□□ 0.41
SPIRE1-201ENST00000309836 CCDC87Q9NVE4 849 aa17.64■□□□□ 0.41
SPIRE1-201ENST00000309836 COL22A1Q8NFW1 1626 aaPredicted RBP17.64■□□□□ 0.41
SPIRE1-201ENST00000309836 COL4A1P02462 1669 aa17.64■□□□□ 0.41
SPIRE1-201ENST00000309836 LAMB2P55268 1798 aa17.63■□□□□ 0.41
SPIRE1-201ENST00000309836 PRKAB2O43741 272 aa17.63■□□□□ 0.41
SPIRE1-201ENST00000309836 CAMTA2O94983 1202 aa17.63■□□□□ 0.41
SPIRE1-201ENST00000309836 RBM6P78332 1123 aaKnown RBP17.63■□□□□ 0.41
SPIRE1-201ENST00000309836 CPLX2Q6PUV4 134 aaKnown RBP17.63■□□□□ 0.41
SPIRE1-201ENST00000309836 ZSWIM5Q9P217 1185 aa17.63■□□□□ 0.41
SPIRE1-201ENST00000309836 HPSEQ9Y251 543 aa17.63■□□□□ 0.41
SPIRE1-201ENST00000309836 NID2Q14112 1375 aa17.63■□□□□ 0.41
SPIRE1-201ENST00000309836 BIN1O00499 593 aa17.63■□□□□ 0.41
SPIRE1-201ENST00000309836 NEMFO60524 1076 aa17.63■□□□□ 0.41
SPIRE1-201ENST00000309836 IARSP41252 1262 aaKnown RBP17.63■□□□□ 0.41
SPIRE1-201ENST00000309836 LIFRP42702 1097 aa17.63■□□□□ 0.41
SPIRE1-201ENST00000309836 CRKLP46109 303 aaKnown RBP17.63■□□□□ 0.41
SPIRE1-201ENST00000309836 CCZ1BP86790 482 aa17.63■□□□□ 0.41
SPIRE1-201ENST00000309836 CCZ1P86791 482 aaPredicted RBP17.63■□□□□ 0.41
SPIRE1-201ENST00000309836 LCORLQ8N3X6 602 aa17.63■□□□□ 0.41
SPIRE1-201ENST00000309836 MPHOSPH8Q99549 860 aa17.63■□□□□ 0.41
SPIRE1-201ENST00000309836 STK36Q9NRP7 1315 aa17.62■□□□□ 0.41
SPIRE1-201ENST00000309836 CCDC69A6NI79 296 aa17.62■□□□□ 0.41
SPIRE1-201ENST00000309836 IFIT3O14879 490 aaKnown RBP17.62■□□□□ 0.41
SPIRE1-201ENST00000309836 U2AF2P26368 475 aaKnown RBP eCLIP17.62■□□□□ 0.418e-9■■■■■ 32.9
SPIRE1-201ENST00000309836 BCAMP50895 628 aa17.62■□□□□ 0.41
SPIRE1-201ENST00000309836 AKNAD1Q5T1N1 836 aa17.62■□□□□ 0.41
SPIRE1-201ENST00000309836 SHC4Q6S5L8 630 aa17.62■□□□□ 0.41
SPIRE1-201ENST00000309836 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.62■□□□□ 0.41
SPIRE1-201ENST00000309836 TAOK2Q9UL54 1235 aa17.62■□□□□ 0.41
SPIRE1-201ENST00000309836 FAM237AA0A1B0GTK4 181 aa17.61■□□□□ 0.41
SPIRE1-201ENST00000309836 CTIFO43310 598 aaKnown RBP17.61■□□□□ 0.41
SPIRE1-201ENST00000309836 PPP6R2O75170 966 aa17.61■□□□□ 0.41
SPIRE1-201ENST00000309836 NTSR2O95665 410 aa17.61■□□□□ 0.41
SPIRE1-201ENST00000309836 TNNT1P13805 278 aa17.61■□□□□ 0.41
SPIRE1-201ENST00000309836 NCAPHQ15003 741 aa17.61■□□□□ 0.41
SPIRE1-201ENST00000309836 FILIP1Q7Z7B0 1213 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms