RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 MAP2K1Q02750 393 aaPredicted RBP8.31□□□□□ -1.08
PTCD2-201ENST00000308077 RNF20Q5VTR2 975 aa8.31□□□□□ -1.08
PTCD2-201ENST00000308077 KLHL34Q8N239 644 aa8.31□□□□□ -1.08
PTCD2-201ENST00000308077 WDR66Q8TBY9 1149 aa8.31□□□□□ -1.08
PTCD2-201ENST00000308077 ZSWIM6Q9HCJ5 1215 aa8.31□□□□□ -1.08
PTCD2-201ENST00000308077 EPB41L4AQ9HCS5 686 aaPredicted RBP8.31□□□□□ -1.08
PTCD2-201ENST00000308077 SCN9AQ15858 1988 aa8.3□□□□□ -1.08
PTCD2-201ENST00000308077 MYH2Q9UKX2 1941 aa8.3□□□□□ -1.08
PTCD2-201ENST00000308077 PRKAB2O43741 272 aa8.3□□□□□ -1.08
PTCD2-201ENST00000308077 DYNLL1P63167 89 aaKnown RBP8.3□□□□□ -1.08
PTCD2-201ENST00000308077 NAA16Q6N069 864 aaPredicted RBP8.3□□□□□ -1.08
PTCD2-201ENST00000308077 RIOK1Q9BRS2 568 aaKnown RBP8.3□□□□□ -1.08
PTCD2-201ENST00000308077 RTFDC1Q9BY42 306 aaPredicted RBP8.3□□□□□ -1.08
PTCD2-201ENST00000308077 COA1Q9GZY4 146 aa8.3□□□□□ -1.08
PTCD2-201ENST00000308077 FAM205AQ6ZU69 1335 aa8.3□□□□□ -1.08
PTCD2-201ENST00000308077 GSG1L2A8MUP6 293 aa8.29□□□□□ -1.08
PTCD2-201ENST00000308077 C21orf2O43822 256 aa8.29□□□□□ -1.08
PTCD2-201ENST00000308077 DOK7Q18PE1 504 aa8.29□□□□□ -1.08
PTCD2-201ENST00000308077 NOL8Q76FK4 1167 aaKnown RBP8.29□□□□□ -1.08
PTCD2-201ENST00000308077 RUFY3Q7L099 469 aa8.29□□□□□ -1.08
PTCD2-201ENST00000308077 TTLL6Q8N841 843 aa8.29□□□□□ -1.08
PTCD2-201ENST00000308077 ANP32EQ9BTT0 268 aa8.29□□□□□ -1.08
PTCD2-201ENST00000308077 ZC3H12CQ9C0D7 883 aaKnown RBP8.29□□□□□ -1.08
PTCD2-201ENST00000308077 NBPF3Q9H094 633 aa8.29□□□□□ -1.08
PTCD2-201ENST00000308077 TMX4Q9H1E5 349 aaPredicted RBP8.29□□□□□ -1.08
PTCD2-201ENST00000308077 SLKQ9H2G2 1235 aaPredicted RBP8.29□□□□□ -1.08
PTCD2-201ENST00000308077 MKRN1Q9UHC7 482 aaKnown RBP8.29□□□□□ -1.08
PTCD2-201ENST00000308077 BAZ2AQ9UIF9 1905 aaKnown RBP8.29□□□□□ -1.08
PTCD2-201ENST00000308077 MAGEB6P1A0A0J9YX57 407 aa8.29□□□□□ -1.08
PTCD2-201ENST00000308077 PATL2C9JE40 543 aaKnown RBP8.29□□□□□ -1.08
PTCD2-201ENST00000308077 LDHBP07195 334 aaKnown RBP8.29□□□□□ -1.08
PTCD2-201ENST00000308077 ATXN8OSP0DMR3 200 aa8.29□□□□□ -1.08
PTCD2-201ENST00000308077 AK2P54819 239 aa8.29□□□□□ -1.08
PTCD2-201ENST00000308077 HAND2P61296 217 aa8.29□□□□□ -1.08
PTCD2-201ENST00000308077 SPTY2D1Q68D10 685 aaPredicted RBP8.29□□□□□ -1.08
PTCD2-201ENST00000308077 IFNL3Q8IZI9 196 aa8.29□□□□□ -1.08
PTCD2-201ENST00000308077 ZGPATQ8N5A5 531 aaKnown RBP8.29□□□□□ -1.08
PTCD2-201ENST00000308077 EYA3Q99504 573 aa8.29□□□□□ -1.08
PTCD2-201ENST00000308077 CYP46A1Q9Y6A2 500 aa8.29□□□□□ -1.08
PTCD2-201ENST00000308077 TIAM2Q8IVF5 1701 aa8.29□□□□□ -1.08
PTCD2-201ENST00000308077 CDK5RAP2Q96SN8 1893 aa8.29□□□□□ -1.08
PTCD2-201ENST00000308077 ADAMTSL1Q8N6G6 1762 aa8.29□□□□□ -1.08
PTCD2-201ENST00000308077 ZMYM6O95789 1325 aa8.29□□□□□ -1.08
PTCD2-201ENST00000308077 E7EWF7 191 aa8.28□□□□□ -1.08
PTCD2-201ENST00000308077 RPS6KB1P23443 525 aa8.28□□□□□ -1.08
PTCD2-201ENST00000308077 PSMA5P28066 241 aa8.28□□□□□ -1.08
PTCD2-201ENST00000308077 TGFB2P61812 414 aa8.28□□□□□ -1.08
PTCD2-201ENST00000308077 GTF2IP78347 998 aa8.28□□□□□ -1.08
PTCD2-201ENST00000308077 KRT32Q14532 448 aa8.28□□□□□ -1.08
PTCD2-201ENST00000308077 ALX1Q15699 326 aa8.28□□□□□ -1.08
PTCD2-201ENST00000308077 MFSD14BQ5SR56 506 aa8.28□□□□□ -1.08
PTCD2-201ENST00000308077 DZIP1Q86YF9 867 aaKnown RBP8.28□□□□□ -1.08
PTCD2-201ENST00000308077 TCEANC2Q96MN5 208 aa8.28□□□□□ -1.08
PTCD2-201ENST00000308077 NEK1Q96PY6 1258 aa8.28□□□□□ -1.08
PTCD2-201ENST00000308077 DBNDD1Q9H9R9 158 aa8.28□□□□□ -1.08
PTCD2-201ENST00000308077 PDRG1Q9NUG6 133 aa8.28□□□□□ -1.08
PTCD2-201ENST00000308077 CTNNA3Q9UI47 895 aa8.28□□□□□ -1.08
PTCD2-201ENST00000308077 SLC4A4Q9Y6R1 1079 aa8.28□□□□□ -1.08
PTCD2-201ENST00000308077 COL4A5P29400 1685 aa8.28□□□□□ -1.08
PTCD2-201ENST00000308077 APPP05067 770 aa8.28□□□□□ -1.08
PTCD2-201ENST00000308077 GNAT2P19087 354 aa8.28□□□□□ -1.08
PTCD2-201ENST00000308077 DDIT3P35638 169 aa8.28□□□□□ -1.08
PTCD2-201ENST00000308077 MCM2P49736 904 aa8.28□□□□□ -1.08
PTCD2-201ENST00000308077 DIXDC1Q155Q3 683 aa8.28□□□□□ -1.08
PTCD2-201ENST00000308077 AOC3Q16853 763 aa8.28□□□□□ -1.08
PTCD2-201ENST00000308077 IMMTQ16891 758 aaKnown RBP8.28□□□□□ -1.08
PTCD2-201ENST00000308077 CC2D2BQ6DHV5 1058 aa8.28□□□□□ -1.08
PTCD2-201ENST00000308077 BLOC1S2Q6QNY1 142 aa8.28□□□□□ -1.08
PTCD2-201ENST00000308077 CERS5Q8N5B7 392 aa8.28□□□□□ -1.08
PTCD2-201ENST00000308077 SDR42E1Q8WUS8 393 aa8.28□□□□□ -1.08
PTCD2-201ENST00000308077 TMX3Q96JJ7 454 aa8.28□□□□□ -1.08
PTCD2-201ENST00000308077 LARP6Q9BRS8 491 aaKnown RBP8.28□□□□□ -1.08
PTCD2-201ENST00000308077 KCNQ5Q9NR82 932 aa8.28□□□□□ -1.08
PTCD2-201ENST00000308077 AATFQ9NY61 560 aaKnown RBP eCLIP8.28□□□□□ -1.08
PTCD2-201ENST00000308077 DACH1Q9UI36 760 aa8.28□□□□□ -1.08
PTCD2-201ENST00000308077 PSME4Q14997 1843 aa8.28□□□□□ -1.08
PTCD2-201ENST00000308077 LAMB1P07942 1786 aa8.27□□□□□ -1.08
PTCD2-201ENST00000308077 LARGE1O95461 756 aa8.27□□□□□ -1.09
PTCD2-201ENST00000308077 KIAA2012Q0VF49 1180 aa8.27□□□□□ -1.09
PTCD2-201ENST00000308077 TOB2Q14106 344 aaPredicted RBP8.27□□□□□ -1.09
PTCD2-201ENST00000308077 FER1L6Q2WGJ9 1857 aa8.27□□□□□ -1.09
PTCD2-201ENST00000308077 CCDC93Q567U6 631 aa8.27□□□□□ -1.09
PTCD2-201ENST00000308077 TBC1D10CQ8IV04 446 aa8.27□□□□□ -1.09
PTCD2-201ENST00000308077 IL27Q8NEV9 243 aa8.27□□□□□ -1.09
PTCD2-201ENST00000308077 NKX2-3Q8TAU0 364 aa8.27□□□□□ -1.09
PTCD2-201ENST00000308077 TBC1D22AQ8WUA7 517 aa8.27□□□□□ -1.09
PTCD2-201ENST00000308077 MXD3Q9BW11 206 aa8.27□□□□□ -1.09
PTCD2-201ENST00000308077 TACC3Q9Y6A5 838 aa8.27□□□□□ -1.09
PTCD2-201ENST00000308077 THSD7BQ9C0I4 1608 aa8.27□□□□□ -1.09
PTCD2-201ENST00000308077 ZNF213O14771 459 aa8.27□□□□□ -1.09
PTCD2-201ENST00000308077 ECE2O60344 883 aa8.27□□□□□ -1.09
PTCD2-201ENST00000308077 IGSF3O75054 1194 aa8.27□□□□□ -1.09
PTCD2-201ENST00000308077 TMED8Q6PL24 325 aaPredicted RBP8.27□□□□□ -1.09
PTCD2-201ENST00000308077 FBXW7Q969H0 707 aa8.27□□□□□ -1.09
PTCD2-201ENST00000308077 NAPBQ9H115 298 aa8.27□□□□□ -1.09
PTCD2-201ENST00000308077 ALDH8A1Q9H2A2 487 aaPredicted RBP8.27□□□□□ -1.09
PTCD2-201ENST00000308077 PIM2Q9P1W9 311 aa8.27□□□□□ -1.09
PTCD2-201ENST00000308077 MROH7-TTC4A0A0A0MT08 1334 aa8.26□□□□□ -1.09
PTCD2-201ENST00000308077 NAV1Q8NEY1 1877 aa8.26□□□□□ -1.09
PTCD2-201ENST00000308077 DDX60LQ5H9U9 1706 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms