RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 CCDC175P0C221 793 aa9.45□□□□□ -0.9
PCDHB1-201ENST00000306549 PRC1O43663 620 aa9.45□□□□□ -0.9
PCDHB1-201ENST00000306549 SNX16P57768 344 aa9.45□□□□□ -0.9
PCDHB1-201ENST00000306549 BMS1Q14692 1282 aaKnown RBP9.45□□□□□ -0.9
PCDHB1-201ENST00000306549 TDRD12Q587J7 1177 aaKnown RBP9.45□□□□□ -0.9
PCDHB1-201ENST00000306549 TMCO3Q6UWJ1 677 aa9.45□□□□□ -0.9
PCDHB1-201ENST00000306549 TBC1D5Q92609 795 aa9.45□□□□□ -0.9
PCDHB1-201ENST00000306549 PODXL2Q9NZ53 605 aa9.45□□□□□ -0.9
PCDHB1-201ENST00000306549 NOC2LQ9Y3T9 749 aaKnown RBP9.45□□□□□ -0.9
PCDHB1-201ENST00000306549 USP31Q70CQ4 1352 aa9.45□□□□□ -0.9
PCDHB1-201ENST00000306549 VPS72Q15906 364 aa9.45□□□□□ -0.9
PCDHB1-201ENST00000306549 IMPG2Q9BZV3 1241 aa9.45□□□□□ -0.9
PCDHB1-201ENST00000306549 GJA3Q9Y6H8 435 aa9.45□□□□□ -0.9
PCDHB1-201ENST00000306549 C2CD5Q86YS7 1000 aa9.45□□□□□ -0.9
PCDHB1-201ENST00000306549 MAGEB6Q8N7X4 407 aa9.45□□□□□ -0.9
PCDHB1-201ENST00000306549 BACH2Q9BYV9 841 aa9.45□□□□□ -0.9
PCDHB1-201ENST00000306549 TBCAO75347 108 aaKnown RBP9.44□□□□□ -0.9
PCDHB1-201ENST00000306549 KCNG4Q8TDN1 519 aa9.44□□□□□ -0.9
PCDHB1-201ENST00000306549 CPSF1Q10570 1443 aaKnown RBP9.44□□□□□ -0.9
PCDHB1-201ENST00000306549 CCDC171Q6TFL3 1326 aa9.44□□□□□ -0.9
PCDHB1-201ENST00000306549 YEATS4O95619 227 aa9.44□□□□□ -0.9
PCDHB1-201ENST00000306549 PDE1AP54750 535 aa9.44□□□□□ -0.9
PCDHB1-201ENST00000306549 SPECC1Q5M775 1068 aa9.44□□□□□ -0.9
PCDHB1-201ENST00000306549 SMARCC2Q8TAQ2 1214 aa9.44□□□□□ -0.9
PCDHB1-201ENST00000306549 APPBP2Q92624 585 aa9.44□□□□□ -0.9
PCDHB1-201ENST00000306549 PHACTR3Q96KR7 559 aa9.44□□□□□ -0.9
PCDHB1-201ENST00000306549 MMP14P50281 582 aa9.44□□□□□ -0.9
PCDHB1-201ENST00000306549 EIF4A1P60842 406 aaKnown RBP9.44□□□□□ -0.9
PCDHB1-201ENST00000306549 CEP135Q66GS9 1140 aa9.44□□□□□ -0.9
PCDHB1-201ENST00000306549 MSANTD4Q8NCY6 345 aa9.44□□□□□ -0.9
PCDHB1-201ENST00000306549 MEIS3Q99687 375 aa9.44□□□□□ -0.9
PCDHB1-201ENST00000306549 UBR1Q8IWV7 1749 aa9.44□□□□□ -0.9
PCDHB1-201ENST00000306549 CBX1P83916 185 aa9.44□□□□□ -0.9
PCDHB1-201ENST00000306549 OTUD6BQ8N6M0 293 aa9.44□□□□□ -0.9
PCDHB1-201ENST00000306549 ZNF496Q96IT1 587 aaPredicted RBP9.44□□□□□ -0.9
PCDHB1-201ENST00000306549 GJD4Q96KN9 370 aaPredicted RBP9.44□□□□□ -0.9
PCDHB1-201ENST00000306549 BIN2Q9UBW5 565 aaPredicted RBP9.44□□□□□ -0.9
PCDHB1-201ENST00000306549 ODF2LQ9ULJ1 636 aa9.44□□□□□ -0.9
PCDHB1-201ENST00000306549 DALRD3Q5D0E6 543 aaKnown RBP9.44□□□□□ -0.9
PCDHB1-201ENST00000306549 SPECC1LQ69YQ0 1117 aa9.44□□□□□ -0.9
PCDHB1-201ENST00000306549 NRXN1Q9ULB1 1477 aa9.44□□□□□ -0.9
PCDHB1-201ENST00000306549 UBXN4Q92575 508 aa9.44□□□□□ -0.9
PCDHB1-201ENST00000306549 CCDC40Q4G0X9 1142 aa9.43□□□□□ -0.9
PCDHB1-201ENST00000306549 TCERG1LQ5VWI1 586 aa9.43□□□□□ -0.9
PCDHB1-201ENST00000306549 CDAN1Q8IWY9 1227 aa9.43□□□□□ -0.9
PCDHB1-201ENST00000306549 DNAJC10Q8IXB1 793 aa9.43□□□□□ -0.9
PCDHB1-201ENST00000306549 AFF2P51816 1311 aa9.43□□□□□ -0.9
PCDHB1-201ENST00000306549 HACE1Q8IYU2 909 aa9.43□□□□□ -0.9
PCDHB1-201ENST00000306549 ARPP21Q9UBL0 812 aaPredicted RBP9.43□□□□□ -0.9
PCDHB1-201ENST00000306549 HEG1Q9ULI3 1381 aa9.43□□□□□ -0.9
PCDHB1-201ENST00000306549 SH3BP5O60239 455 aa9.43□□□□□ -0.9
PCDHB1-201ENST00000306549 FAM89AQ96GI7 184 aa9.43□□□□□ -0.9
PCDHB1-201ENST00000306549 USP16Q9Y5T5 823 aa9.43□□□□□ -0.9
PCDHB1-201ENST00000306549 PHACTR2O75167 634 aa9.43□□□□□ -0.9
PCDHB1-201ENST00000306549 CIAO1O76071 339 aa9.43□□□□□ -0.9
PCDHB1-201ENST00000306549 SFPQP23246 707 aaKnown RBP eCLIP9.43□□□□□ -0.9
PCDHB1-201ENST00000306549 MAP3K11Q16584 847 aa9.43□□□□□ -0.9
PCDHB1-201ENST00000306549 GPHNQ9NQX3 736 aaPredicted RBP9.43□□□□□ -0.9
PCDHB1-201ENST00000306549 ANO10Q9NW15 660 aa9.43□□□□□ -0.9
PCDHB1-201ENST00000306549 SWAP70Q9UH65 585 aa9.43□□□□□ -0.9
PCDHB1-201ENST00000306549 C1orf167Q5SNV9 1468 aa9.43□□□□□ -0.9
PCDHB1-201ENST00000306549 BIRC2Q13490 618 aa9.43□□□□□ -0.9
PCDHB1-201ENST00000306549 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.43□□□□□ -0.9
PCDHB1-201ENST00000306549 PARP1P09874 1014 aaKnown RBP9.43□□□□□ -0.9
PCDHB1-201ENST00000306549 CCDC93Q567U6 631 aa9.43□□□□□ -0.9
PCDHB1-201ENST00000306549 IQCGQ9H095 443 aaKnown RBP9.43□□□□□ -0.9
PCDHB1-201ENST00000306549 TRIM37O94972 964 aa9.42□□□□□ -0.9
PCDHB1-201ENST00000306549 IFT172Q9UG01 1749 aa9.42□□□□□ -0.9
PCDHB1-201ENST00000306549 CHURC1Q8WUH1 139 aa9.42□□□□□ -0.9
PCDHB1-201ENST00000306549 TECPR2O15040 1411 aa9.42□□□□□ -0.9
PCDHB1-201ENST00000306549 PALLDQ8WX93 1383 aa9.42□□□□□ -0.9
PCDHB1-201ENST00000306549 A0A1B0GUL7 405 aa9.42□□□□□ -0.9
PCDHB1-201ENST00000306549 PRPHP41219 470 aa9.42□□□□□ -0.9
PCDHB1-201ENST00000306549 CRKLP46109 303 aaKnown RBP9.42□□□□□ -0.9
PCDHB1-201ENST00000306549 MTIF2P46199 727 aaKnown RBP9.42□□□□□ -0.9
PCDHB1-201ENST00000306549 FAM107BQ9H098 131 aa9.42□□□□□ -0.9
PCDHB1-201ENST00000306549 CARMIL3Q8ND23 1372 aa9.42□□□□□ -0.9
PCDHB1-201ENST00000306549 NEURL1BA8MQ27 555 aa9.42□□□□□ -0.9
PCDHB1-201ENST00000306549 GAS8O95995 478 aa9.42□□□□□ -0.9
PCDHB1-201ENST00000306549 PLS1Q14651 629 aa9.42□□□□□ -0.9
PCDHB1-201ENST00000306549 PDCL2Q8N4E4 241 aa9.42□□□□□ -0.9
PCDHB1-201ENST00000306549 NUP88Q99567 741 aaPredicted RBP9.42□□□□□ -0.9
PCDHB1-201ENST00000306549 CCNA1P78396 465 aa9.42□□□□□ -0.9
PCDHB1-201ENST00000306549 CEP85Q6P2H3 762 aa9.42□□□□□ -0.9
PCDHB1-201ENST00000306549 CASQ1P31415 396 aa9.42□□□□□ -0.9
PCDHB1-201ENST00000306549 MICU3Q86XE3 530 aa9.42□□□□□ -0.9
PCDHB1-201ENST00000306549 SLC16A10Q8TF71 515 aa9.42□□□□□ -0.9
PCDHB1-201ENST00000306549 CCDC17Q96LX7 622 aa9.42□□□□□ -0.9
PCDHB1-201ENST00000306549 LLPHQ9BRT6 129 aaKnown RBP9.42□□□□□ -0.9
PCDHB1-201ENST00000306549 KLHL10Q6JEL2 608 aa9.41□□□□□ -0.9
PCDHB1-201ENST00000306549 DDX19AQ9NUU7 478 aaKnown RBP9.41□□□□□ -0.9
PCDHB1-201ENST00000306549 CLIP2Q9UDT6 1046 aa9.41□□□□□ -0.9
PCDHB1-201ENST00000306549 ANKRD26Q9UPS8 1709 aa9.41□□□□□ -0.9
PCDHB1-201ENST00000306549 ZBED4O75132 1171 aa9.41□□□□□ -0.9
PCDHB1-201ENST00000306549 TTC16Q8NEE8 873 aa9.41□□□□□ -0.9
PCDHB1-201ENST00000306549 TIGD1Q96MW7 591 aa9.41□□□□□ -0.9
PCDHB1-201ENST00000306549 TMCO5BA8MYB1 307 aa9.41□□□□□ -0.9
PCDHB1-201ENST00000306549 LPXNO60711 386 aa9.41□□□□□ -0.9
PCDHB1-201ENST00000306549 NAPAP54920 295 aa9.41□□□□□ -0.9
PCDHB1-201ENST00000306549 BRAPQ7Z569 592 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms