RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 CASC1Q6TDU7 716 aa32.65■■■□□ 2.82
HDAC3-201ENST00000305264 LCORLQ8N3X6 602 aa32.65■■■□□ 2.82
HDAC3-201ENST00000305264 ECM29Q5VYK3 1845 aa32.65■■■□□ 2.82
HDAC3-201ENST00000305264 DLGAP5Q15398 846 aa32.65■■■□□ 2.82
HDAC3-201ENST00000305264 RBM26Q5T8P6 1007 aaKnown RBP32.65■■■□□ 2.82
HDAC3-201ENST00000305264 AIDAQ96BJ3 306 aa32.65■■■□□ 2.82
HDAC3-201ENST00000305264 PRMT6Q96LA8 375 aaPredicted RBP32.65■■■□□ 2.82
HDAC3-201ENST00000305264 ARMT1Q9H993 441 aa32.65■■■□□ 2.82
HDAC3-201ENST00000305264 CDK5RAP2Q96SN8 1893 aa32.64■■■□□ 2.82
HDAC3-201ENST00000305264 MTMR14Q8NCE2 650 aa32.64■■■□□ 2.82
HDAC3-201ENST00000305264 TRPM4Q8TD43 1214 aa32.64■■■□□ 2.82
HDAC3-201ENST00000305264 ZBED3Q96IU2 234 aaPredicted RBP32.64■■■□□ 2.82
HDAC3-201ENST00000305264 ESYT1Q9BSJ8 1104 aa32.64■■■□□ 2.82
HDAC3-201ENST00000305264 GPAA1O43292 621 aa32.63■■■□□ 2.81
HDAC3-201ENST00000305264 C8orf34Q49A92 452 aa32.63■■■□□ 2.81
HDAC3-201ENST00000305264 NOL10Q9BSC4 688 aaKnown RBP32.63■■■□□ 2.81
HDAC3-201ENST00000305264 KIF4BQ2VIQ3 1234 aa32.63■■■□□ 2.81
HDAC3-201ENST00000305264 RUFY2Q8WXA3 655 aa32.63■■■□□ 2.81
HDAC3-201ENST00000305264 RAD50Q92878 1312 aa32.63■■■□□ 2.81
HDAC3-201ENST00000305264 SGSM2O43147 1006 aa32.62■■■□□ 2.81
HDAC3-201ENST00000305264 BAG3O95817 575 aa32.62■■■□□ 2.81
HDAC3-201ENST00000305264 PPP4CP60510 307 aa32.62■■■□□ 2.81
HDAC3-201ENST00000305264 SH3RF3Q8TEJ3 882 aaPredicted RBP32.62■■■□□ 2.81
HDAC3-201ENST00000305264 HACL1Q9UJ83 578 aa32.62■■■□□ 2.81
HDAC3-201ENST00000305264 POTECB2RU33 542 aa32.61■■■□□ 2.81
HDAC3-201ENST00000305264 WNT10BO00744 389 aa32.61■■■□□ 2.81
HDAC3-201ENST00000305264 RHBDL3P58872 404 aa32.61■■■□□ 2.81
HDAC3-201ENST00000305264 NBPF9Q3BBW0 867 aa32.61■■■□□ 2.81
HDAC3-201ENST00000305264 CCDC171Q6TFL3 1326 aa32.61■■■□□ 2.81
HDAC3-201ENST00000305264 CDC42EP5Q6NZY7 148 aa32.6■■■□□ 2.81
HDAC3-201ENST00000305264 STRBPQ96SI9 672 aaKnown RBP32.6■■■□□ 2.81
HDAC3-201ENST00000305264 ADARB2Q9NS39 739 aaKnown RBP32.6■■■□□ 2.81
HDAC3-201ENST00000305264 TDRD3Q9H7E2 651 aaKnown RBP32.59■■■□□ 2.81
HDAC3-201ENST00000305264 FOCADQ5VW36 1801 aa32.59■■■□□ 2.81
HDAC3-201ENST00000305264 ZNF526Q8TF50 670 aaPredicted RBP32.59■■■□□ 2.81
HDAC3-201ENST00000305264 USP40Q9NVE5 1235 aa32.58■■■□□ 2.81
HDAC3-201ENST00000305264 HIRAP54198 1017 aaPredicted RBP32.58■■■□□ 2.81
HDAC3-201ENST00000305264 ASTN2O75129 1339 aaPredicted RBP32.57■■■□□ 2.8
HDAC3-201ENST00000305264 IQCA1LA6NCM1 817 aa32.57■■■□□ 2.8
HDAC3-201ENST00000305264 PRKAB2O43741 272 aa32.57■■■□□ 2.8
HDAC3-201ENST00000305264 EPHX2P34913 555 aa32.57■■■□□ 2.8
HDAC3-201ENST00000305264 VPS53Q5VIR6 699 aa32.57■■■□□ 2.8
HDAC3-201ENST00000305264 CLRN2A0PK11 232 aa32.56■■■□□ 2.8
HDAC3-201ENST00000305264 PLCG2P16885 1265 aa32.56■■■□□ 2.8
HDAC3-201ENST00000305264 CACNB3P54284 484 aa32.56■■■□□ 2.8
HDAC3-201ENST00000305264 TEX11Q8IYF3 940 aa32.56■■■□□ 2.8
HDAC3-201ENST00000305264 CERS3Q8IU89 383 aa32.56■■■□□ 2.8
HDAC3-201ENST00000305264 TAF1DQ9H5J8 278 aaPredicted RBP32.56■■■□□ 2.8
HDAC3-201ENST00000305264 FOXP2O15409 715 aa32.55■■■□□ 2.8
HDAC3-201ENST00000305264 SPDYE2Q495Y8 402 aa32.55■■■□□ 2.8
HDAC3-201ENST00000305264 SDR42E1Q8WUS8 393 aa32.55■■■□□ 2.8
HDAC3-201ENST00000305264 CRNKL1Q9BZJ0 848 aaKnown RBP32.54■■■□□ 2.8
HDAC3-201ENST00000305264 ZNF70Q9UC06 446 aaPredicted RBP32.54■■■□□ 2.8
HDAC3-201ENST00000305264 SLC4A4Q9Y6R1 1079 aa32.54■■■□□ 2.8
HDAC3-201ENST00000305264 NAV1Q8NEY1 1877 aa32.54■■■□□ 2.8
HDAC3-201ENST00000305264 WDHD1O75717 1129 aaPredicted RBP32.54■■■□□ 2.8
HDAC3-201ENST00000305264 MFAP1P55081 439 aaKnown RBP32.54■■■□□ 2.8
HDAC3-201ENST00000305264 RRAGCQ9HB90 399 aa32.54■■■□□ 2.8
HDAC3-201ENST00000305264 NFIAQ12857 509 aa32.53■■■□□ 2.8
HDAC3-201ENST00000305264 NMRK2Q9NPI5 230 aa32.53■■■□□ 2.8
HDAC3-201ENST00000305264 MYO1BO43795 1136 aa32.52■■■□□ 2.8
HDAC3-201ENST00000305264 TGFBRAP1Q8WUH2 860 aa32.52■■■□□ 2.8
HDAC3-201ENST00000305264 BAZ2AQ9UIF9 1905 aaKnown RBP32.52■■■□□ 2.8
HDAC3-201ENST00000305264 DDX60LQ5H9U9 1706 aaKnown RBP32.51■■■□□ 2.8
HDAC3-201ENST00000305264 HSPD1P10809 573 aaKnown RBP32.51■■■□□ 2.8
HDAC3-201ENST00000305264 GNAT2P19087 354 aa32.51■■■□□ 2.8
HDAC3-201ENST00000305264 USP50Q70EL3 339 aaPredicted RBP32.51■■■□□ 2.8
HDAC3-201ENST00000305264 VEZTQ9HBM0 779 aa32.51■■■□□ 2.8
HDAC3-201ENST00000305264 EPB41L4AQ9HCS5 686 aaPredicted RBP32.51■■■□□ 2.8
HDAC3-201ENST00000305264 ANO2Q9NQ90 1003 aa32.51■■■□□ 2.8
HDAC3-201ENST00000305264 DDX4Q9NQI0 724 aaKnown RBP32.51■■■□□ 2.8
HDAC3-201ENST00000305264 GSG1L2A8MUP6 293 aa32.5■■■□□ 2.79
HDAC3-201ENST00000305264 PTH1RQ03431 593 aa32.5■■■□□ 2.79
HDAC3-201ENST00000305264 SEC24BO95487 1268 aa32.5■■■□□ 2.79
HDAC3-201ENST00000305264 PICALMQ13492 652 aa32.5■■■□□ 2.79
HDAC3-201ENST00000305264 MAPKAPK5Q8IW41 473 aa32.5■■■□□ 2.79
HDAC3-201ENST00000305264 FLT1P17948 1338 aa32.5■■■□□ 2.79
HDAC3-201ENST00000305264 VEGFAP15692 232 aaPredicted RBP32.49■■■□□ 2.79
HDAC3-201ENST00000305264 USP5P45974 858 aa32.49■■■□□ 2.79
HDAC3-201ENST00000305264 LSG1Q9H089 658 aaKnown RBP32.49■■■□□ 2.79
HDAC3-201ENST00000305264 GGA3Q9NZ52 723 aa32.49■■■□□ 2.79
HDAC3-201ENST00000305264 TMOD2Q9NZR1 351 aa32.49■■■□□ 2.79
HDAC3-201ENST00000305264 IDI2Q9BXS1 227 aa32.49■■■□□ 2.79
HDAC3-201ENST00000305264 FAM198AQ9UFP1 575 aa32.49■■■□□ 2.79
HDAC3-201ENST00000305264 SCAF8Q9UPN6 1271 aaKnown RBP32.49■■■□□ 2.79
HDAC3-201ENST00000305264 APPP05067 770 aa32.48■■■□□ 2.79
HDAC3-201ENST00000305264 EAPPQ56P03 285 aaPredicted RBP32.48■■■□□ 2.79
HDAC3-201ENST00000305264 ANGEL2Q5VTE6 544 aaKnown RBP32.48■■■□□ 2.79
HDAC3-201ENST00000305264 DCP1AQ9NPI6 582 aaPredicted RBP32.48■■■□□ 2.79
HDAC3-201ENST00000305264 TCP10L2B9ZVM9 353 aa32.47■■■□□ 2.79
HDAC3-201ENST00000305264 PATL2C9JE40 543 aaKnown RBP32.47■■■□□ 2.79
HDAC3-201ENST00000305264 MKRN1Q9UHC7 482 aaKnown RBP32.47■■■□□ 2.79
HDAC3-201ENST00000305264 MYH1P12882 1939 aa32.47■■■□□ 2.79
HDAC3-201ENST00000305264 POLR2AP24928 1970 aaKnown RBP32.47■■■□□ 2.79
HDAC3-201ENST00000305264 KIAA1211Q6ZU35 1233 aa32.47■■■□□ 2.79
HDAC3-201ENST00000305264 DSCC1Q9BVC3 393 aa32.47■■■□□ 2.79
HDAC3-201ENST00000305264 ATP8A2Q9NTI2 1148 aa32.46■■■□□ 2.79
HDAC3-201ENST00000305264 TCP10Q12799 353 aa32.45■■■□□ 2.79
HDAC3-201ENST00000305264 PNMA8AQ86V59 439 aaPredicted RBP32.45■■■□□ 2.79
HDAC3-201ENST00000305264 IFNL3Q8IZI9 196 aa32.45■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms