RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 ADGRA1Q86SQ6 560 aa29.59■■■□□ 2.33
HOXC9-201ENST00000303450 PGAP2Q9UHJ9 254 aa29.59■■■□□ 2.33
HOXC9-201ENST00000303450 CLRN2A0PK11 232 aa29.58■■■□□ 2.33
HOXC9-201ENST00000303450 BAG3O95817 575 aa29.58■■■□□ 2.33
HOXC9-201ENST00000303450 GSPT1P15170 499 aaKnown RBP29.58■■■□□ 2.33
HOXC9-201ENST00000303450 DCPSQ96C86 337 aaKnown RBP29.58■■■□□ 2.33
HOXC9-201ENST00000303450 ECM29Q5VYK3 1845 aa29.58■■■□□ 2.33
HOXC9-201ENST00000303450 TOMM70O94826 608 aa29.57■■■□□ 2.32
HOXC9-201ENST00000303450 ZFYP08048 801 aaPredicted RBP29.57■■■□□ 2.32
HOXC9-201ENST00000303450 UBE3CQ15386 1083 aa29.57■■■□□ 2.32
HOXC9-201ENST00000303450 SPDYE2Q495Y8 402 aa29.57■■■□□ 2.32
HOXC9-201ENST00000303450 VEZTQ9HBM0 779 aa29.57■■■□□ 2.32
HOXC9-201ENST00000303450 USP40Q9NVE5 1235 aa29.57■■■□□ 2.32
HOXC9-201ENST00000303450 AATFQ9NY61 560 aaKnown RBP eCLIP29.57■■■□□ 2.32
HOXC9-201ENST00000303450 ZNF70Q9UC06 446 aaPredicted RBP29.57■■■□□ 2.32
HOXC9-201ENST00000303450 TCRBV5S4A2TA0A5A2 114 aa29.56■■■□□ 2.32
HOXC9-201ENST00000303450 RNF113AO15541 343 aaKnown RBP29.56■■■□□ 2.32
HOXC9-201ENST00000303450 CHADLQ6NUI6 762 aa29.56■■■□□ 2.32
HOXC9-201ENST00000303450 CDC42EP5Q6NZY7 148 aa29.56■■■□□ 2.32
HOXC9-201ENST00000303450 TMOD2Q9NZR1 351 aa29.56■■■□□ 2.32
HOXC9-201ENST00000303450 AK9Q5TCS8 1911 aa29.56■■■□□ 2.32
HOXC9-201ENST00000303450 POLR2AP24928 1970 aaKnown RBP29.56■■■□□ 2.32
HOXC9-201ENST00000303450 MAP1SQ66K74 1059 aaPredicted RBP29.55■■■□□ 2.32
HOXC9-201ENST00000303450 MIGA1Q8NAN2 632 aa29.55■■■□□ 2.32
HOXC9-201ENST00000303450 PITPNM2Q9BZ72 1349 aa29.55■■■□□ 2.32
HOXC9-201ENST00000303450 CHGBP05060 677 aa29.55■■■□□ 2.32
HOXC9-201ENST00000303450 SLFNL1Q499Z3 407 aa29.55■■■□□ 2.32
HOXC9-201ENST00000303450 SDSP20132 328 aa29.54■■■□□ 2.32
HOXC9-201ENST00000303450 APOBEC3FQ8IUX4 373 aaKnown RBP29.54■■■□□ 2.32
HOXC9-201ENST00000303450 RBM46Q8TBY0 533 aaKnown RBP29.54■■■□□ 2.32
HOXC9-201ENST00000303450 PLCG2P16885 1265 aa29.53■■■□□ 2.32
HOXC9-201ENST00000303450 PPP4CP60510 307 aa29.53■■■□□ 2.32
HOXC9-201ENST00000303450 TICAM2Q86XR7 235 aa29.53■■■□□ 2.32
HOXC9-201ENST00000303450 SULF1Q8IWU6 871 aa29.53■■■□□ 2.32
HOXC9-201ENST00000303450 SMC1BQ8NDV3 1235 aa29.53■■■□□ 2.32
HOXC9-201ENST00000303450 MAGEB6P1A0A0J9YX57 407 aa29.52■■■□□ 2.32
HOXC9-201ENST00000303450 CACNB3P54284 484 aa29.52■■■□□ 2.32
HOXC9-201ENST00000303450 KRT26Q7Z3Y9 468 aa29.52■■■□□ 2.32
HOXC9-201ENST00000303450 CERS3Q8IU89 383 aa29.52■■■□□ 2.32
HOXC9-201ENST00000303450 SCAF8Q9UPN6 1271 aaKnown RBP29.52■■■□□ 2.32
HOXC9-201ENST00000303450 RHBDL3P58872 404 aa29.51■■■□□ 2.32
HOXC9-201ENST00000303450 DYNLL1P63167 89 aaKnown RBP29.51■■■□□ 2.32
HOXC9-201ENST00000303450 CDC37L1Q7L3B6 337 aa29.51■■■□□ 2.32
HOXC9-201ENST00000303450 APPBP2Q92624 585 aa29.51■■■□□ 2.32
HOXC9-201ENST00000303450 RFX7Q2KHR2 1363 aa29.51■■■□□ 2.31
HOXC9-201ENST00000303450 TCP10L2B9ZVM9 353 aa29.5■■■□□ 2.31
HOXC9-201ENST00000303450 TNFAIP1Q13829 316 aa29.5■■■□□ 2.31
HOXC9-201ENST00000303450 SH3RF3Q8TEJ3 882 aaPredicted RBP29.5■■■□□ 2.31
HOXC9-201ENST00000303450 USP48Q86UV5 1035 aa29.5■■■□□ 2.31
HOXC9-201ENST00000303450 TEX11Q8IYF3 940 aa29.5■■■□□ 2.31
HOXC9-201ENST00000303450 TNNI2P48788 182 aa29.49■■■□□ 2.31
HOXC9-201ENST00000303450 BMP2KLQ5H9B9 411 aa29.49■■■□□ 2.31
HOXC9-201ENST00000303450 FKBP1CQ5VVH2 108 aa29.49■■■□□ 2.31
HOXC9-201ENST00000303450 AIDAQ96BJ3 306 aa29.49■■■□□ 2.31
HOXC9-201ENST00000303450 RIOK1Q9BRS2 568 aaKnown RBP29.49■■■□□ 2.31
HOXC9-201ENST00000303450 GLIS2Q9BZE0 524 aaPredicted RBP29.49■■■□□ 2.31
HOXC9-201ENST00000303450 PUS7LQ9H0K6 701 aaKnown RBP29.49■■■□□ 2.31
HOXC9-201ENST00000303450 OSBP2Q969R2 916 aa29.48■■■□□ 2.31
HOXC9-201ENST00000303450 ADM5C9JUS6 153 aa29.47■■■□□ 2.31
HOXC9-201ENST00000303450 HIP1O00291 1037 aa29.47■■■□□ 2.31
HOXC9-201ENST00000303450 MBD4O95243 580 aa29.47■■■□□ 2.31
HOXC9-201ENST00000303450 ZMYM1Q5SVZ6 1142 aa29.47■■■□□ 2.31
HOXC9-201ENST00000303450 IDI2Q9BXS1 227 aa29.47■■■□□ 2.31
HOXC9-201ENST00000303450 DEFB129Q9H1M3 183 aa29.47■■■□□ 2.31
HOXC9-201ENST00000303450 WDHD1O75717 1129 aaPredicted RBP29.46■■■□□ 2.31
HOXC9-201ENST00000303450 NFIAQ12857 509 aa29.46■■■□□ 2.31
HOXC9-201ENST00000303450 LCORLQ8N3X6 602 aa29.46■■■□□ 2.31
HOXC9-201ENST00000303450 ARMT1Q9H993 441 aa29.46■■■□□ 2.31
HOXC9-201ENST00000303450 DIAPH3Q9NSV4 1193 aa29.46■■■□□ 2.31
HOXC9-201ENST00000303450 FSTL1Q12841 308 aa29.45■■■□□ 2.31
HOXC9-201ENST00000303450 PICALMQ13492 652 aa29.45■■■□□ 2.31
HOXC9-201ENST00000303450 RASA3Q14644 834 aa29.45■■■□□ 2.31
HOXC9-201ENST00000303450 TCP10Q12799 353 aa29.45■■■□□ 2.3
HOXC9-201ENST00000303450 FAM83AQ86UY5 434 aa29.45■■■□□ 2.3
HOXC9-201ENST00000303450 CRNKL1Q9BZJ0 848 aaKnown RBP29.45■■■□□ 2.3
HOXC9-201ENST00000303450 PPP2R3BQ9Y5P8 575 aa29.45■■■□□ 2.3
HOXC9-201ENST00000303450 ITGBL1O95965 494 aaPredicted RBP29.44■■■□□ 2.3
HOXC9-201ENST00000303450 TGFBRAP1Q8WUH2 860 aa29.44■■■□□ 2.3
HOXC9-201ENST00000303450 SEC62Q99442 399 aaKnown RBP29.44■■■□□ 2.3
HOXC9-201ENST00000303450 HELLSQ9NRZ9 838 aa29.44■■■□□ 2.3
HOXC9-201ENST00000303450 FAM198AQ9UFP1 575 aa29.44■■■□□ 2.3
HOXC9-201ENST00000303450 M0R2C6 588 aa29.43■■■□□ 2.3
HOXC9-201ENST00000303450 USP5P45974 858 aa29.43■■■□□ 2.3
HOXC9-201ENST00000303450 NMIQ13287 307 aaPredicted RBP29.43■■■□□ 2.3
HOXC9-201ENST00000303450 FAM227BQ96M60 508 aa29.43■■■□□ 2.3
HOXC9-201ENST00000303450 TRAF5O00463 557 aa29.42■■■□□ 2.3
HOXC9-201ENST00000303450 ENTPD3O75355 529 aa29.42■■■□□ 2.3
HOXC9-201ENST00000303450 CNTNAP1P78357 1384 aa29.42■■■□□ 2.3
HOXC9-201ENST00000303450 DLK2Q6UY11 383 aa29.42■■■□□ 2.3
HOXC9-201ENST00000303450 FAM151AQ8WW52 585 aa29.42■■■□□ 2.3
HOXC9-201ENST00000303450 TMEM39BQ9GZU3 492 aa29.42■■■□□ 2.3
HOXC9-201ENST00000303450 DDX4Q9NQI0 724 aaKnown RBP29.42■■■□□ 2.3
HOXC9-201ENST00000303450 A0A0D9SFI3 127 aa29.41■■■□□ 2.3
HOXC9-201ENST00000303450 GPAA1O43292 621 aa29.41■■■□□ 2.3
HOXC9-201ENST00000303450 NPM3O75607 178 aaKnown RBP29.41■■■□□ 2.3
HOXC9-201ENST00000303450 PRAMEF18Q5VWM3 479 aa29.41■■■□□ 2.3
HOXC9-201ENST00000303450 MAPKAPK5Q8IW41 473 aa29.41■■■□□ 2.3
HOXC9-201ENST00000303450 CDK5RAP2Q96SN8 1893 aa29.41■■■□□ 2.3
HOXC9-201ENST00000303450 MCMDC2Q4G0Z9 681 aa29.4■■■□□ 2.3
HOXC9-201ENST00000303450 CWC27Q6UX04 472 aaKnown RBP29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms