RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 TRDNQ13061 729 aa14.17□□□□□ -0.14
TPM3-202ENST00000302206 NAA16Q6N069 864 aaPredicted RBP14.17□□□□□ -0.14
TPM3-202ENST00000302206 GIMAP6Q6P9H5 292 aa14.17□□□□□ -0.14
TPM3-202ENST00000302206 RALYLQ86SE5 291 aaKnown RBP14.17□□□□□ -0.14
TPM3-202ENST00000302206 SP8Q8IXZ3 490 aa14.17□□□□□ -0.14
TPM3-202ENST00000302206 LCORLQ8N3X6 602 aa14.17□□□□□ -0.14
TPM3-202ENST00000302206 NECAB1Q8N987 351 aa14.17□□□□□ -0.14
TPM3-202ENST00000302206 BRF1Q92994 677 aa14.17□□□□□ -0.14
TPM3-202ENST00000302206 TCEANC2Q96MN5 208 aa14.17□□□□□ -0.14
TPM3-202ENST00000302206 NBPF3Q9H094 633 aa14.17□□□□□ -0.14
TPM3-202ENST00000302206 NAPBQ9H115 298 aa14.17□□□□□ -0.14
TPM3-202ENST00000302206 ARMT1Q9H993 441 aa14.17□□□□□ -0.14
TPM3-202ENST00000302206 ABCF2Q9UG63 623 aa14.17□□□□□ -0.14
TPM3-202ENST00000302206 GGA1Q9UJY5 639 aa14.17□□□□□ -0.14
TPM3-202ENST00000302206 IQSEC3Q9UPP2 1182 aaPredicted RBP14.17□□□□□ -0.14
TPM3-202ENST00000302206 PARP3Q9Y6F1 533 aa14.17□□□□□ -0.14
TPM3-202ENST00000302206 LTBP1Q14766 1721 aa14.17□□□□□ -0.14
TPM3-202ENST00000302206 ZSCAN22P10073 491 aaPredicted RBP14.16□□□□□ -0.14
TPM3-202ENST00000302206 SYT1P21579 422 aa14.16□□□□□ -0.14
TPM3-202ENST00000302206 HAND2P61296 217 aa14.16□□□□□ -0.14
TPM3-202ENST00000302206 GSE1Q14687 1217 aa14.16□□□□□ -0.14
TPM3-202ENST00000302206 NSUN4Q96CB9 384 aaKnown RBP14.16□□□□□ -0.14
TPM3-202ENST00000302206 RIOK1Q9BRS2 568 aaKnown RBP14.16□□□□□ -0.14
TPM3-202ENST00000302206 MTA3Q9BTC8 594 aa14.16□□□□□ -0.14
TPM3-202ENST00000302206 CNNM2Q9H8M5 875 aa14.16□□□□□ -0.14
TPM3-202ENST00000302206 EPB41L4AQ9HCS5 686 aaPredicted RBP14.16□□□□□ -0.14
TPM3-202ENST00000302206 SLC4A4Q9Y6R1 1079 aa14.16□□□□□ -0.14
TPM3-202ENST00000302206 CCDC88AQ3V6T2 1871 aa14.15□□□□□ -0.14
TPM3-202ENST00000302206 PPEF1O14829 653 aaPredicted RBP14.15□□□□□ -0.14
TPM3-202ENST00000302206 PRC1O43663 620 aa14.15□□□□□ -0.14
TPM3-202ENST00000302206 SRGNP10124 158 aa14.15□□□□□ -0.14
TPM3-202ENST00000302206 ALDH1B1P30837 517 aa14.15□□□□□ -0.14
TPM3-202ENST00000302206 TXNRD3Q86VQ6 643 aa14.15□□□□□ -0.14
TPM3-202ENST00000302206 TBC1D10CQ8IV04 446 aa14.15□□□□□ -0.14
TPM3-202ENST00000302206 JMYQ8N9B5 988 aa14.15□□□□□ -0.14
TPM3-202ENST00000302206 RBM46Q8TBY0 533 aaKnown RBP14.15□□□□□ -0.14
TPM3-202ENST00000302206 ANAPC4Q9UJX5 808 aa14.15□□□□□ -0.14
TPM3-202ENST00000302206 ATP6V0A2Q9Y487 856 aa14.15□□□□□ -0.14
TPM3-202ENST00000302206 ATP6V1DQ9Y5K8 247 aa14.15□□□□□ -0.14
TPM3-202ENST00000302206 UFL1O94874 794 aa14.14□□□□□ -0.15
TPM3-202ENST00000302206 MMP10P09238 476 aa14.14□□□□□ -0.15
TPM3-202ENST00000302206 IL1R1P14778 569 aa14.14□□□□□ -0.15
TPM3-202ENST00000302206 ANTXR2P58335 489 aa14.14□□□□□ -0.15
TPM3-202ENST00000302206 MECOMQ03112 1051 aa14.14□□□□□ -0.15
TPM3-202ENST00000302206 ADGRA1Q86SQ6 560 aa14.14□□□□□ -0.15
TPM3-202ENST00000302206 SMARCC2Q8TAQ2 1214 aa14.14□□□□□ -0.15
TPM3-202ENST00000302206 STAG1Q8WVM7 1258 aa14.14□□□□□ -0.15
TPM3-202ENST00000302206 TMEM87BQ96K49 555 aa14.14□□□□□ -0.15
TPM3-202ENST00000302206 KRT23Q9C075 422 aa14.14□□□□□ -0.15
TPM3-202ENST00000302206 KIF3AQ9Y496 699 aa14.14□□□□□ -0.15
TPM3-202ENST00000302206 F13A1P00488 732 aa14.13□□□□□ -0.15
TPM3-202ENST00000302206 PCP11498 1178 aaKnown RBP14.13□□□□□ -0.15
TPM3-202ENST00000302206 PDIA3P30101 505 aaKnown RBP14.13□□□□□ -0.15
TPM3-202ENST00000302206 TDO2P48775 406 aa14.13□□□□□ -0.15
TPM3-202ENST00000302206 GSTO1P78417 241 aa14.13□□□□□ -0.15
TPM3-202ENST00000302206 HMGN5P82970 282 aaKnown RBP14.13□□□□□ -0.15
TPM3-202ENST00000302206 APOBRQ0VD83 1088 aa14.13□□□□□ -0.15
TPM3-202ENST00000302206 AKNAD1Q5T1N1 836 aa14.13□□□□□ -0.15
TPM3-202ENST00000302206 MCTP1Q6DN14 999 aa14.13□□□□□ -0.15
TPM3-202ENST00000302206 CERS3Q8IU89 383 aa14.13□□□□□ -0.15
TPM3-202ENST00000302206 MIGA1Q8NAN2 632 aa14.13□□□□□ -0.15
TPM3-202ENST00000302206 TBC1D16Q8TBP0 767 aa14.13□□□□□ -0.15
TPM3-202ENST00000302206 ZNF384Q8TF68 577 aa14.13□□□□□ -0.15
TPM3-202ENST00000302206 MASTLQ96GX5 879 aa14.13□□□□□ -0.15
TPM3-202ENST00000302206 RNF41Q9H4P4 317 aaPredicted RBP14.13□□□□□ -0.15
TPM3-202ENST00000302206 NMRK2Q9NPI5 230 aa14.13□□□□□ -0.15
TPM3-202ENST00000302206 LMBRD1Q9NUN5 540 aa14.13□□□□□ -0.15
TPM3-202ENST00000302206 NSFL1CQ9UNZ2 370 aaKnown RBP14.13□□□□□ -0.15
TPM3-202ENST00000302206 MTMR6Q9Y217 621 aa14.13□□□□□ -0.15
TPM3-202ENST00000302206 PRKAB2O43741 272 aa14.12□□□□□ -0.15
TPM3-202ENST00000302206 NT5C2P49902 561 aa14.12□□□□□ -0.15
TPM3-202ENST00000302206 SCRN1Q12765 414 aa14.12□□□□□ -0.15
TPM3-202ENST00000302206 FSTL1Q12841 308 aa14.12□□□□□ -0.15
TPM3-202ENST00000302206 CHAF1AQ13111 956 aaPredicted RBP14.12□□□□□ -0.15
TPM3-202ENST00000302206 KLHL40Q2TBA0 621 aa14.12□□□□□ -0.15
TPM3-202ENST00000302206 LARP1BQ659C4 914 aaKnown RBP14.12□□□□□ -0.15
TPM3-202ENST00000302206 RGS22Q8NE09 1264 aa14.12□□□□□ -0.15
TPM3-202ENST00000302206 LRRC2Q9BYS8 371 aa14.12□□□□□ -0.15
TPM3-202ENST00000302206 CD209Q9NNX6 404 aa14.12□□□□□ -0.15
TPM3-202ENST00000302206 KIF13BQ9NQT8 1826 aa14.11□□□□□ -0.15
TPM3-202ENST00000302206 SH2B2O14492 632 aaPredicted RBP14.11□□□□□ -0.15
TPM3-202ENST00000302206 DHX16O60231 1041 aaKnown RBP14.11□□□□□ -0.15
TPM3-202ENST00000302206 LDHBP07195 334 aaKnown RBP14.11□□□□□ -0.15
TPM3-202ENST00000302206 LDHCP07864 332 aa14.11□□□□□ -0.15
TPM3-202ENST00000302206 COL11A2P13942 1736 aaPredicted RBP14.11□□□□□ -0.15
TPM3-202ENST00000302206 HTRA3P83110 453 aa14.11□□□□□ -0.15
TPM3-202ENST00000302206 STK3Q13188 491 aa14.11□□□□□ -0.15
TPM3-202ENST00000302206 STYK1Q6J9G0 422 aa14.11□□□□□ -0.15
TPM3-202ENST00000302206 MFSD6Q6ZSS7 791 aa14.11□□□□□ -0.15
TPM3-202ENST00000302206 TMEM87AQ8NBN3 555 aa14.11□□□□□ -0.15
TPM3-202ENST00000302206 NSUN7Q8NE18 718 aaKnown RBP14.11□□□□□ -0.15
TPM3-202ENST00000302206 CRNKL1Q9BZJ0 848 aaKnown RBP14.11□□□□□ -0.15
TPM3-202ENST00000302206 ATP8A2Q9NTI2 1148 aa14.11□□□□□ -0.15
TPM3-202ENST00000302206 ANGEL1Q9UNK9 670 aaKnown RBP14.11□□□□□ -0.15
TPM3-202ENST00000302206 BCS1LQ9Y276 419 aa14.11□□□□□ -0.15
TPM3-202ENST00000302206 FAM205AQ6ZU69 1335 aa14.11□□□□□ -0.15
TPM3-202ENST00000302206 PRDX5P30044 214 aa14.1□□□□□ -0.15
TPM3-202ENST00000302206 DEKP35659 375 aaKnown RBP14.1□□□□□ -0.15
TPM3-202ENST00000302206 LIFRP42702 1097 aa14.1□□□□□ -0.15
TPM3-202ENST00000302206 PPP4CP60510 307 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms