RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 C19orf44Q9H6X5 657 aa14.92□□□□□ -0.02
TVP23A-201ENST00000299866 JRKLQ9Y4A0 524 aa14.92□□□□□ -0.02
TVP23A-201ENST00000299866 NFE2L3Q9Y4A8 694 aa14.92□□□□□ -0.02
TVP23A-201ENST00000299866 UTYO14607 1347 aa14.92□□□□□ -0.02
TVP23A-201ENST00000299866 NEURL1BA8MQ27 555 aa14.92□□□□□ -0.02
TVP23A-201ENST00000299866 PIP4K2AP48426 406 aaPredicted RBP14.92□□□□□ -0.02
TVP23A-201ENST00000299866 TBX2Q13207 712 aaPredicted RBP14.92□□□□□ -0.02
TVP23A-201ENST00000299866 GCKRQ14397 625 aa14.92□□□□□ -0.02
TVP23A-201ENST00000299866 ZNF569Q5MCW4 686 aa14.92□□□□□ -0.02
TVP23A-201ENST00000299866 CCDC175P0C221 793 aa14.91□□□□□ -0.02
TVP23A-201ENST00000299866 MAGEA9P43362 315 aa14.91□□□□□ -0.02
TVP23A-201ENST00000299866 PAG1Q9NWQ8 432 aa14.91□□□□□ -0.02
TVP23A-201ENST00000299866 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.91□□□□□ -0.02
TVP23A-201ENST00000299866 RNMTO43148 476 aaKnown RBP14.91□□□□□ -0.02
TVP23A-201ENST00000299866 BMP6P22004 513 aa14.91□□□□□ -0.02
TVP23A-201ENST00000299866 TIMM10P62072 90 aa14.91□□□□□ -0.02
TVP23A-201ENST00000299866 C1orf141Q5JVX7 400 aa14.91□□□□□ -0.02
TVP23A-201ENST00000299866 CCDC102BQ68D86 513 aa14.91□□□□□ -0.02
TVP23A-201ENST00000299866 UBE3BQ7Z3V4 1068 aa14.91□□□□□ -0.02
TVP23A-201ENST00000299866 COPRSQ9NQ92 184 aa14.91□□□□□ -0.02
TVP23A-201ENST00000299866 AKAP2Q9Y2D5 859 aa14.91□□□□□ -0.02
TVP23A-201ENST00000299866 PRC1O43663 620 aa14.91□□□□□ -0.02
TVP23A-201ENST00000299866 AKAP4Q5JQC9 854 aa14.91□□□□□ -0.02
TVP23A-201ENST00000299866 L1RE1Q9UN81 338 aa14.91□□□□□ -0.02
TVP23A-201ENST00000299866 NWD1Q149M9 1564 aa14.91□□□□□ -0.02
TVP23A-201ENST00000299866 SH3TC1Q8TE82 1336 aa14.9□□□□□ -0.02
TVP23A-201ENST00000299866 KIF5CO60282 957 aa14.9□□□□□ -0.02
TVP23A-201ENST00000299866 VSNL1P62760 191 aa14.9□□□□□ -0.02
TVP23A-201ENST00000299866 FMR1Q06787 632 aaKnown RBP eCLIP14.9□□□□□ -0.02
TVP23A-201ENST00000299866 XAGE3Q8WTP9 111 aa14.9□□□□□ -0.02
TVP23A-201ENST00000299866 DDX21Q9NR30 783 aaKnown RBP eCLIP14.9□□□□□ -0.02
TVP23A-201ENST00000299866 HELLSQ9NRZ9 838 aa14.9□□□□□ -0.02
TVP23A-201ENST00000299866 CDC23Q9UJX2 597 aa14.9□□□□□ -0.02
TVP23A-201ENST00000299866 MYH15Q9Y2K3 1946 aa14.9□□□□□ -0.02
TVP23A-201ENST00000299866 RXRAP19793 462 aa14.9□□□□□ -0.02
TVP23A-201ENST00000299866 CEP112Q8N8E3 955 aa14.9□□□□□ -0.02
TVP23A-201ENST00000299866 SAMSN1Q9NSI8 373 aaKnown RBP14.9□□□□□ -0.02
TVP23A-201ENST00000299866 RICTORQ6R327 1708 aa14.9□□□□□ -0.02
TVP23A-201ENST00000299866 PTPRUQ92729 1446 aa14.9□□□□□ -0.02
TVP23A-201ENST00000299866 CASP8Q14790 479 aa14.9□□□□□ -0.02
TVP23A-201ENST00000299866 PLEKHO1Q53GL0 409 aaPredicted RBP14.9□□□□□ -0.02
TVP23A-201ENST00000299866 LRRC31Q6UY01 552 aa14.9□□□□□ -0.02
TVP23A-201ENST00000299866 COPS6Q7L5N1 327 aa14.9□□□□□ -0.02
TVP23A-201ENST00000299866 RNF216Q9NWF9 866 aaPredicted RBP14.9□□□□□ -0.02
TVP23A-201ENST00000299866 MAST3O60307 1309 aa14.89□□□□□ -0.03
TVP23A-201ENST00000299866 SART3Q15020 963 aaKnown RBP14.89□□□□□ -0.03
TVP23A-201ENST00000299866 RGS22Q8NE09 1264 aa14.89□□□□□ -0.03
TVP23A-201ENST00000299866 AMOTL2Q9Y2J4 779 aa14.89□□□□□ -0.03
TVP23A-201ENST00000299866 SETD1BQ9UPS6 1966 aaKnown RBP14.89□□□□□ -0.03
TVP23A-201ENST00000299866 LOC102724159A0A0B4J2E5 919 aa14.89□□□□□ -0.03
TVP23A-201ENST00000299866 ATP5J2-PTCD1G3V325 749 aa14.89□□□□□ -0.03
TVP23A-201ENST00000299866 PTCD1O75127 700 aaKnown RBP14.89□□□□□ -0.03
TVP23A-201ENST00000299866 RFX5P48382 616 aaPredicted RBP14.89□□□□□ -0.03
TVP23A-201ENST00000299866 SLC39A6Q13433 755 aa14.89□□□□□ -0.03
TVP23A-201ENST00000299866 PWP2Q15269 919 aaKnown RBP14.89□□□□□ -0.03
TVP23A-201ENST00000299866 ZMYM1Q5SVZ6 1142 aa14.89□□□□□ -0.03
TVP23A-201ENST00000299866 RAD9BQ6WBX8 426 aa14.89□□□□□ -0.03
TVP23A-201ENST00000299866 VPS37DQ86XT2 251 aa14.89□□□□□ -0.03
TVP23A-201ENST00000299866 JMYQ8N9B5 988 aa14.89□□□□□ -0.03
TVP23A-201ENST00000299866 HNRNPLLQ8WVV9 542 aaKnown RBP14.89□□□□□ -0.03
TVP23A-201ENST00000299866 ALG1Q9BT22 464 aa14.89□□□□□ -0.03
TVP23A-201ENST00000299866 RAI14Q9P0K7 980 aa14.89□□□□□ -0.03
TVP23A-201ENST00000299866 KCNH3Q9ULD8 1083 aa14.89□□□□□ -0.03
TVP23A-201ENST00000299866 HPS5Q9UPZ3 1129 aa14.89□□□□□ -0.03
TVP23A-201ENST00000299866 HPSEQ9Y251 543 aa14.89□□□□□ -0.03
TVP23A-201ENST00000299866 M0R2C6 588 aa14.88□□□□□ -0.03
TVP23A-201ENST00000299866 HSP90AB3PQ58FF7 597 aa14.88□□□□□ -0.03
TVP23A-201ENST00000299866 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.88□□□□□ -0.03
TVP23A-201ENST00000299866 FAM204AQ9H8W3 233 aa14.88□□□□□ -0.03
TVP23A-201ENST00000299866 AKR1B15C9JRZ8 316 aaPredicted RBP14.88□□□□□ -0.03
TVP23A-201ENST00000299866 WASHC4Q2M389 1173 aa14.88□□□□□ -0.03
TVP23A-201ENST00000299866 POTEB2H3BUK9 544 aa14.88□□□□□ -0.03
TVP23A-201ENST00000299866 LTKP29376 864 aa14.88□□□□□ -0.03
TVP23A-201ENST00000299866 GRAMD1CQ8IYS0 662 aa14.88□□□□□ -0.03
TVP23A-201ENST00000299866 CDC5LQ99459 802 aaKnown RBP14.88□□□□□ -0.03
TVP23A-201ENST00000299866 ADGRG1Q9Y653 693 aa14.88□□□□□ -0.03
TVP23A-201ENST00000299866 TEX33O43247 280 aa14.87□□□□□ -0.03
TVP23A-201ENST00000299866 PDIA6Q15084 440 aa14.87□□□□□ -0.03
TVP23A-201ENST00000299866 E2F4Q16254 413 aa14.87□□□□□ -0.03
TVP23A-201ENST00000299866 SLC35F6Q8N357 371 aa14.87□□□□□ -0.03
TVP23A-201ENST00000299866 GPATCH11Q8N954 259 aa14.87□□□□□ -0.03
TVP23A-201ENST00000299866 MAN1B1Q9UKM7 699 aa14.87□□□□□ -0.03
TVP23A-201ENST00000299866 RAB21Q9UL25 225 aa14.87□□□□□ -0.03
TVP23A-201ENST00000299866 PPFIBP1Q86W92 1011 aa14.87□□□□□ -0.03
TVP23A-201ENST00000299866 TEX13AQ9BXU3 409 aaPredicted RBP14.87□□□□□ -0.03
TVP23A-201ENST00000299866 CTAGE9A4FU28 777 aa14.87□□□□□ -0.03
TVP23A-201ENST00000299866 LRRIQ3A6PVS8 624 aaPredicted RBP14.87□□□□□ -0.03
TVP23A-201ENST00000299866 PRR29P0C7W0 189 aa14.87□□□□□ -0.03
TVP23A-201ENST00000299866 USP5P45974 858 aa14.87□□□□□ -0.03
TVP23A-201ENST00000299866 KRT40Q6A162 431 aa14.87□□□□□ -0.03
TVP23A-201ENST00000299866 RALYLQ86SE5 291 aaKnown RBP14.87□□□□□ -0.03
TVP23A-201ENST00000299866 MSANTD4Q8NCY6 345 aa14.87□□□□□ -0.03
TVP23A-201ENST00000299866 PPM1EQ8WY54 764 aa14.87□□□□□ -0.03
TVP23A-201ENST00000299866 PHKBQ93100 1093 aa14.87□□□□□ -0.03
TVP23A-201ENST00000299866 MKRN1Q9UHC7 482 aaKnown RBP14.87□□□□□ -0.03
TVP23A-201ENST00000299866 CTAGE15A4D2H0 777 aa14.86□□□□□ -0.03
TVP23A-201ENST00000299866 RNF113AO15541 343 aaKnown RBP14.86□□□□□ -0.03
TVP23A-201ENST00000299866 CTAGE8P0CG41 777 aa14.86□□□□□ -0.03
TVP23A-201ENST00000299866 FKBP4Q02790 459 aaKnown RBP eCLIP14.86□□□□□ -0.03
TVP23A-201ENST00000299866 RESP18Q5W5W9 173 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms