RNA–Protein interactions for RNA: ENST00000299238.6

HPS6-201, Transcript of HPS6, biogenesis of lysosomal organelles complex 2 subunit 3, humanhuman

APPRIS P1 BASIC

Gene HPS6, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6-201ENST00000299238 MMP14P50281 582 aa23.34■■□□□ 1.33
HPS6-201ENST00000299238 GTF2A1P52655 376 aaPredicted RBP23.34■■□□□ 1.33
HPS6-201ENST00000299238 FAM193AP78312 1265 aa23.34■■□□□ 1.33
HPS6-201ENST00000299238 IMMTQ16891 758 aaKnown RBP23.34■■□□□ 1.33
HPS6-201ENST00000299238 ATL3Q6DD88 541 aa23.34■■□□□ 1.33
HPS6-201ENST00000299238 KRBA2Q6ZNG9 492 aa23.34■■□□□ 1.33
HPS6-201ENST00000299238 CREBRFQ8IUR6 639 aa23.33■■□□□ 1.33
HPS6-201ENST00000299238 DHX37Q8IY37 1157 aaKnown RBP23.33■■□□□ 1.33
HPS6-201ENST00000299238 CCDC144BQ3MJ40 725 aa23.33■■□□□ 1.33
HPS6-201ENST00000299238 CCAR1Q8IX12 1150 aaKnown RBP23.33■■□□□ 1.33
HPS6-201ENST00000299238 CCDC144CPQ8IYA2 1237 aa23.33■■□□□ 1.33
HPS6-201ENST00000299238 PHLPP1O60346 1717 aa23.32■■□□□ 1.32
HPS6-201ENST00000299238 GPAA1O43292 621 aa23.32■■□□□ 1.32
HPS6-201ENST00000299238 PDE8BO95263 885 aa23.32■■□□□ 1.32
HPS6-201ENST00000299238 PLA2G4AP47712 749 aa23.32■■□□□ 1.32
HPS6-201ENST00000299238 ST5P78524 1137 aa23.32■■□□□ 1.32
HPS6-201ENST00000299238 MB21D2Q8IYB1 491 aaPredicted RBP23.32■■□□□ 1.32
HPS6-201ENST00000299238 FBXW7Q969H0 707 aa23.32■■□□□ 1.32
HPS6-201ENST00000299238 ZNF512BQ96KM6 892 aaPredicted RBP23.32■■□□□ 1.32
HPS6-201ENST00000299238 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.32■■□□□ 1.32
HPS6-201ENST00000299238 TAOK2Q9UL54 1235 aa23.32■■□□□ 1.32
HPS6-201ENST00000299238 MYO1CO00159 1063 aa23.32■■□□□ 1.32
HPS6-201ENST00000299238 SNW1Q13573 536 aaKnown RBP23.32■■□□□ 1.32
HPS6-201ENST00000299238 ARID5BQ14865 1188 aa23.32■■□□□ 1.32
HPS6-201ENST00000299238 ATRNO75882 1429 aa23.32■■□□□ 1.32
HPS6-201ENST00000299238 A0A0G2JS52 829 aa23.31■■□□□ 1.32
HPS6-201ENST00000299238 BMS1Q14692 1282 aaKnown RBP23.31■■□□□ 1.32
HPS6-201ENST00000299238 C11orf57Q6ZUT1 292 aaPredicted RBP23.31■■□□□ 1.32
HPS6-201ENST00000299238 PLA2G4DQ86XP0 818 aa23.31■■□□□ 1.32
HPS6-201ENST00000299238 LRRN4CLQ8ND94 238 aa23.31■■□□□ 1.32
HPS6-201ENST00000299238 ERO1AQ96HE7 468 aa23.31■■□□□ 1.32
HPS6-201ENST00000299238 ZNF396Q96N95 335 aaPredicted RBP23.31■■□□□ 1.32
HPS6-201ENST00000299238 EIF5P55010 431 aaKnown RBP23.31■■□□□ 1.32
HPS6-201ENST00000299238 CDCA7Q9BWT1 371 aaPredicted RBP23.31■■□□□ 1.32
HPS6-201ENST00000299238 SPATA31A1Q5TZJ5 1347 aa23.31■■□□□ 1.32
HPS6-201ENST00000299238 RREB1Q92766 1687 aa23.31■■□□□ 1.32
HPS6-201ENST00000299238 ADD2P35612 726 aa23.3■■□□□ 1.32
HPS6-201ENST00000299238 ERCC6LQ2NKX8 1250 aa23.3■■□□□ 1.32
HPS6-201ENST00000299238 ENGASEQ8NFI3 743 aa23.3■■□□□ 1.32
HPS6-201ENST00000299238 GJB4Q9NTQ9 266 aa23.3■■□□□ 1.32
HPS6-201ENST00000299238 PRC1O43663 620 aa23.3■■□□□ 1.32
HPS6-201ENST00000299238 ADAMTS2O95450 1211 aa23.3■■□□□ 1.32
HPS6-201ENST00000299238 CAVIN2O95810 425 aa23.3■■□□□ 1.32
HPS6-201ENST00000299238 ZNF75DP51815 510 aa23.3■■□□□ 1.32
HPS6-201ENST00000299238 ANTXR2P58335 489 aa23.3■■□□□ 1.32
HPS6-201ENST00000299238 DDB1Q16531 1140 aa23.3■■□□□ 1.32
HPS6-201ENST00000299238 HPS5Q9UPZ3 1129 aa23.3■■□□□ 1.32
HPS6-201ENST00000299238 INTS5Q6P9B9 1019 aaKnown RBP23.29■■□□□ 1.32
HPS6-201ENST00000299238 PIH1D3Q9NQM4 214 aaKnown RBP23.29■■□□□ 1.32
HPS6-201ENST00000299238 TOMM22Q9NS69 142 aa23.29■■□□□ 1.32
HPS6-201ENST00000299238 CCDC87Q9NVE4 849 aa23.29■■□□□ 1.32
HPS6-201ENST00000299238 TRMT1Q9NXH9 659 aaKnown RBP23.29■■□□□ 1.32
HPS6-201ENST00000299238 PHKA1P46020 1223 aa23.29■■□□□ 1.32
HPS6-201ENST00000299238 ME1P48163 572 aa23.29■■□□□ 1.32
HPS6-201ENST00000299238 TTF1Q15361 905 aaPredicted RBP23.29■■□□□ 1.32
HPS6-201ENST00000299238 CCDC102BQ68D86 513 aa23.29■■□□□ 1.32
HPS6-201ENST00000299238 PNMA6AP0CW24 399 aaPredicted RBP23.29■■□□□ 1.32
HPS6-201ENST00000299238 CLCN6P51797 869 aa23.29■■□□□ 1.32
HPS6-201ENST00000299238 IQCB1Q15051 598 aa23.29■■□□□ 1.32
HPS6-201ENST00000299238 ACSBG1Q96GR2 724 aa23.29■■□□□ 1.32
HPS6-201ENST00000299238 CTAGE5O15320 804 aa23.28■■□□□ 1.32
HPS6-201ENST00000299238 ARID4AP29374 1257 aaPredicted RBP23.28■■□□□ 1.32
HPS6-201ENST00000299238 PUM3Q15397 648 aaKnown RBP23.28■■□□□ 1.32
HPS6-201ENST00000299238 SLC9C2Q5TAH2 1124 aa23.28■■□□□ 1.32
HPS6-201ENST00000299238 SMARCE1Q969G3 411 aa23.28■■□□□ 1.32
HPS6-201ENST00000299238 MROH5Q6ZUA9 1318 aa23.28■■□□□ 1.32
HPS6-201ENST00000299238 MYH14Q7Z406 1995 aaKnown RBP23.28■■□□□ 1.32
HPS6-201ENST00000299238 CRKLP46109 303 aaKnown RBP23.28■■□□□ 1.32
HPS6-201ENST00000299238 FAM160A1Q05DH4 1040 aa23.28■■□□□ 1.32
HPS6-201ENST00000299238 SUSD4Q5VX71 490 aa23.28■■□□□ 1.32
HPS6-201ENST00000299238 AK7Q96M32 723 aa23.28■■□□□ 1.32
HPS6-201ENST00000299238 KLF18A0A0U1RQI7 1052 aa23.27■■□□□ 1.32
HPS6-201ENST00000299238 H2AFXP16104 143 aaPredicted RBP23.27■■□□□ 1.32
HPS6-201ENST00000299238 PTPN14Q15678 1187 aa23.27■■□□□ 1.32
HPS6-201ENST00000299238 CCDC73Q6ZRK6 1079 aa23.27■■□□□ 1.32
HPS6-201ENST00000299238 EP400NLQ6ZTU2 488 aa23.27■■□□□ 1.32
HPS6-201ENST00000299238 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.27■■□□□ 1.32
HPS6-201ENST00000299238 HELBQ8NG08 1087 aaPredicted RBP23.27■■□□□ 1.32
HPS6-201ENST00000299238 DENND2AQ9ULE3 1009 aa23.27■■□□□ 1.32
HPS6-201ENST00000299238 CICQ96RK0 1608 aaPredicted RBP23.27■■□□□ 1.32
HPS6-201ENST00000299238 IDH1O75874 414 aaKnown RBP23.27■■□□□ 1.32
HPS6-201ENST00000299238 POLR3DP05423 398 aaPredicted RBP23.27■■□□□ 1.32
HPS6-201ENST00000299238 BRD2P25440 801 aaKnown RBP23.27■■□□□ 1.32
HPS6-201ENST00000299238 ATP6V1AP38606 617 aa23.27■■□□□ 1.32
HPS6-201ENST00000299238 ICE2Q659A1 982 aa23.27■■□□□ 1.32
HPS6-201ENST00000299238 NCOA7Q8NI08 942 aa23.27■■□□□ 1.32
HPS6-201ENST00000299238 NBPF3Q9H094 633 aa23.27■■□□□ 1.32
HPS6-201ENST00000299238 ZCCHC17Q9NP64 241 aaKnown RBP23.27■■□□□ 1.32
HPS6-201ENST00000299238 THRAP3Q9Y2W1 955 aaKnown RBP23.27■■□□□ 1.32
HPS6-201ENST00000299238 ZNF213O14771 459 aa23.26■■□□□ 1.31
HPS6-201ENST00000299238 SLU7O95391 586 aaKnown RBP23.26■■□□□ 1.31
HPS6-201ENST00000299238 CASQ1P31415 396 aa23.26■■□□□ 1.31
HPS6-201ENST00000299238 MUM1L1Q5H9M0 696 aa23.26■■□□□ 1.31
HPS6-201ENST00000299238 FSIP1Q8NA03 581 aa23.26■■□□□ 1.31
HPS6-201ENST00000299238 LPIN2Q92539 896 aa23.26■■□□□ 1.31
HPS6-201ENST00000299238 RTEL1Q9NZ71 1219 aa23.26■■□□□ 1.31
HPS6-201ENST00000299238 LAMB2P55268 1798 aa23.26■■□□□ 1.31
HPS6-201ENST00000299238 DOCK2Q92608 1830 aa23.26■■□□□ 1.31
HPS6-201ENST00000299238 WDR19Q8NEZ3 1342 aa23.26■■□□□ 1.31
HPS6-201ENST00000299238 GOLGA8BA8MQT2 603 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms