RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 ARHGAP29Q52LW3 1261 aa18.03■□□□□ 0.48
UBAP1-201ENST00000297661 KLF18A0A0U1RQI7 1052 aa18.02■□□□□ 0.48
UBAP1-201ENST00000297661 POLR3GO15318 223 aaPredicted RBP18.02■□□□□ 0.48
UBAP1-201ENST00000297661 KINO60870 393 aaKnown RBP18.02■□□□□ 0.48
UBAP1-201ENST00000297661 RXRAP19793 462 aa18.02■□□□□ 0.48
UBAP1-201ENST00000297661 TEX35Q5T0J7 233 aa18.02■□□□□ 0.48
UBAP1-201ENST00000297661 DNAJC10Q8IXB1 793 aa18.02■□□□□ 0.48
UBAP1-201ENST00000297661 KCND1Q9NSA2 647 aa18.02■□□□□ 0.48
UBAP1-201ENST00000297661 CLIC4Q9Y696 253 aa18.02■□□□□ 0.48
UBAP1-201ENST00000297661 GOLGA8BA8MQT2 603 aa18.02■□□□□ 0.48
UBAP1-201ENST00000297661 PRC1O43663 620 aa18.02■□□□□ 0.48
UBAP1-201ENST00000297661 PCDHA7Q9UN72 937 aa18.02■□□□□ 0.48
UBAP1-201ENST00000297661 TJP1Q07157 1748 aa18.02■□□□□ 0.47
UBAP1-201ENST00000297661 BECN2A8MW95 431 aa18.01■□□□□ 0.47
UBAP1-201ENST00000297661 ERVV-2B6SEH9 535 aa18.01■□□□□ 0.47
UBAP1-201ENST00000297661 EN1Q05925 392 aaPredicted RBP18.01■□□□□ 0.47
UBAP1-201ENST00000297661 TCIRG1Q13488 830 aa18.01■□□□□ 0.47
UBAP1-201ENST00000297661 SYT10Q6XYQ8 523 aa18.01■□□□□ 0.47
UBAP1-201ENST00000297661 CERS3Q8IU89 383 aa18.01■□□□□ 0.47
UBAP1-201ENST00000297661 ITGB4P16144 1822 aa18.01■□□□□ 0.47
UBAP1-201ENST00000297661 CIAO1O76071 339 aa18■□□□□ 0.47
UBAP1-201ENST00000297661 IMMTQ16891 758 aaKnown RBP18■□□□□ 0.47
UBAP1-201ENST00000297661 ZNF274Q96GC6 653 aaPredicted RBP18■□□□□ 0.47
UBAP1-201ENST00000297661 ZNF396Q96N95 335 aaPredicted RBP18■□□□□ 0.47
UBAP1-201ENST00000297661 ISCA1Q9BUE6 129 aa18■□□□□ 0.47
UBAP1-201ENST00000297661 ANTXR2P58335 489 aa18■□□□□ 0.47
UBAP1-201ENST00000297661 HLFQ16534 295 aa18■□□□□ 0.47
UBAP1-201ENST00000297661 CCDC93Q567U6 631 aa18■□□□□ 0.47
UBAP1-201ENST00000297661 AIFM3Q96NN9 605 aa18■□□□□ 0.47
UBAP1-201ENST00000297661 KCPQ6ZWJ8 1503 aa18■□□□□ 0.47
UBAP1-201ENST00000297661 ZRANB2O95218 330 aaKnown RBP eCLIP18■□□□□ 0.47
UBAP1-201ENST00000297661 NDUFA8P51970 172 aa18■□□□□ 0.47
UBAP1-201ENST00000297661 TPM4P67936 248 aa18■□□□□ 0.47
UBAP1-201ENST00000297661 FAM160A1Q05DH4 1040 aa18■□□□□ 0.47
UBAP1-201ENST00000297661 STX1AQ16623 288 aa18■□□□□ 0.47
UBAP1-201ENST00000297661 E4F1Q66K89 784 aaPredicted RBP18■□□□□ 0.47
UBAP1-201ENST00000297661 TXLNBQ8N3L3 684 aa18■□□□□ 0.47
UBAP1-201ENST00000297661 ENGASEQ8NFI3 743 aa18■□□□□ 0.47
UBAP1-201ENST00000297661 ATG3Q9NT62 314 aa18■□□□□ 0.47
UBAP1-201ENST00000297661 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18■□□□□ 0.47
UBAP1-201ENST00000297661 LAMB4A4D0S4 1761 aa17.99■□□□□ 0.47
UBAP1-201ENST00000297661 SBF2Q86WG5 1849 aa17.99■□□□□ 0.47
UBAP1-201ENST00000297661 BIN1O00499 593 aa17.99■□□□□ 0.47
UBAP1-201ENST00000297661 GPAA1O43292 621 aa17.99■□□□□ 0.47
UBAP1-201ENST00000297661 TNNT3P45378 269 aaPredicted RBP17.99■□□□□ 0.47
UBAP1-201ENST00000297661 IRX3P78415 501 aaPredicted RBP17.99■□□□□ 0.47
UBAP1-201ENST00000297661 IFIT5Q13325 482 aaKnown RBP17.99■□□□□ 0.47
UBAP1-201ENST00000297661 SF3A1Q15459 793 aaKnown RBP17.99■□□□□ 0.47
UBAP1-201ENST00000297661 METTL24Q5JXM2 366 aa17.99■□□□□ 0.47
UBAP1-201ENST00000297661 TMCO3Q6UWJ1 677 aa17.99■□□□□ 0.47
UBAP1-201ENST00000297661 AOPEPQ8N6M6 819 aa17.99■□□□□ 0.47
UBAP1-201ENST00000297661 C8orf76Q96K31 380 aa17.99■□□□□ 0.47
UBAP1-201ENST00000297661 SDF4Q9BRK5 362 aa17.99■□□□□ 0.47
UBAP1-201ENST00000297661 ORC3Q9UBD5 711 aaPredicted RBP17.99■□□□□ 0.47
UBAP1-201ENST00000297661 HPS5Q9UPZ3 1129 aa17.99■□□□□ 0.47
UBAP1-201ENST00000297661 GOLGB1Q14789 3259 aaKnown RBP17.99■□□□□ 0.47
UBAP1-201ENST00000297661 MUM1L1Q5H9M0 696 aa17.99■□□□□ 0.47
UBAP1-201ENST00000297661 SMIM5Q71RC9 77 aa17.99■□□□□ 0.47
UBAP1-201ENST00000297661 DHX40Q8IX18 779 aaKnown RBP17.99■□□□□ 0.47
UBAP1-201ENST00000297661 PPP1R13BQ96KQ4 1090 aa17.99■□□□□ 0.47
UBAP1-201ENST00000297661 GREM2Q9H772 168 aa17.99■□□□□ 0.47
UBAP1-201ENST00000297661 KIF28PB7ZC32 967 aa17.98■□□□□ 0.47
UBAP1-201ENST00000297661 MCAMP43121 646 aa17.98■□□□□ 0.47
UBAP1-201ENST00000297661 STK38Q15208 465 aa17.98■□□□□ 0.47
UBAP1-201ENST00000297661 ISM2Q6H9L7 571 aa17.98■□□□□ 0.47
UBAP1-201ENST00000297661 KRBA2Q6ZNG9 492 aa17.98■□□□□ 0.47
UBAP1-201ENST00000297661 INCENPQ9NQS7 918 aa17.98■□□□□ 0.47
UBAP1-201ENST00000297661 ARGLU1Q9NWB6 273 aaPredicted RBP17.98■□□□□ 0.47
UBAP1-201ENST00000297661 NUP188Q5SRE5 1749 aa17.98■□□□□ 0.47
UBAP1-201ENST00000297661 APPP05067 770 aa17.98■□□□□ 0.47
UBAP1-201ENST00000297661 GSDMDP57764 484 aa17.98■□□□□ 0.47
UBAP1-201ENST00000297661 ST5P78524 1137 aa17.98■□□□□ 0.47
UBAP1-201ENST00000297661 BCL9O00512 1426 aa17.97■□□□□ 0.47
UBAP1-201ENST00000297661 CPLX1O14810 134 aa17.97■□□□□ 0.47
UBAP1-201ENST00000297661 LDHAL6AQ6ZMR3 332 aa17.97■□□□□ 0.47
UBAP1-201ENST00000297661 RALYLQ86SE5 291 aaKnown RBP17.97■□□□□ 0.47
UBAP1-201ENST00000297661 MB21D2Q8IYB1 491 aaPredicted RBP17.97■□□□□ 0.47
UBAP1-201ENST00000297661 SENP2Q9HC62 589 aa17.97■□□□□ 0.47
UBAP1-201ENST00000297661 RSPH14Q9UHP6 348 aa17.97■□□□□ 0.47
UBAP1-201ENST00000297661 IDH1O75874 414 aaKnown RBP17.97■□□□□ 0.47
UBAP1-201ENST00000297661 HELBQ8NG08 1087 aaPredicted RBP17.97■□□□□ 0.47
UBAP1-201ENST00000297661 MRPS27Q92552 414 aaKnown RBP17.97■□□□□ 0.47
UBAP1-201ENST00000297661 SMARCE1Q969G3 411 aa17.97■□□□□ 0.47
UBAP1-201ENST00000297661 RASSF4Q9H2L5 321 aa17.97■□□□□ 0.47
UBAP1-201ENST00000297661 ZNF213O14771 459 aa17.96■□□□□ 0.47
UBAP1-201ENST00000297661 KIF6Q6ZMV9 814 aa17.96■□□□□ 0.47
UBAP1-201ENST00000297661 FMR1NBQ8N0W7 255 aaPredicted RBP17.96■□□□□ 0.47
UBAP1-201ENST00000297661 UBXN4Q92575 508 aa17.96■□□□□ 0.47
UBAP1-201ENST00000297661 APPBP2Q92624 585 aa17.96■□□□□ 0.47
UBAP1-201ENST00000297661 AKAP2Q9Y2D5 859 aa17.96■□□□□ 0.47
UBAP1-201ENST00000297661 SNAP23O00161 211 aa17.96■□□□□ 0.47
UBAP1-201ENST00000297661 ITGA6P23229 1130 aa17.96■□□□□ 0.47
UBAP1-201ENST00000297661 MARCKSP29966 332 aaPredicted RBP17.96■□□□□ 0.47
UBAP1-201ENST00000297661 EZH2Q15910 746 aaKnown RBP17.96■□□□□ 0.47
UBAP1-201ENST00000297661 SLC9C2Q5TAH2 1124 aa17.96■□□□□ 0.47
UBAP1-201ENST00000297661 NBPF3Q9H094 633 aa17.96■□□□□ 0.47
UBAP1-201ENST00000297661 UBE2Q2LH0YL09 131 aa17.95■□□□□ 0.46
UBAP1-201ENST00000297661 DPCR1Q3MIW9 517 aa17.95■□□□□ 0.46
UBAP1-201ENST00000297661 LINC00301Q8NCQ3 95 aa17.95■□□□□ 0.46
UBAP1-201ENST00000297661 UPF1Q92900 1129 aaKnown RBP eCLIP17.95■□□□□ 0.463e-7■■■■■ 30.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms