RNA–Protein interactions for RNA: ENST00000296098.4

TRIM54-201, Transcript of tripartite motif containing 54, humanhuman

TSL 1 (best) BASIC

Gene TRIM54, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-201ENST00000296098 GOLPH3LQ9H4A5 285 aa27.95■■■□□ 2.06
TRIM54-201ENST00000296098 COL1A1P02452 1464 aaPredicted RBP27.95■■■□□ 2.06
TRIM54-201ENST00000296098 ZBTB43O43298 467 aa27.94■■■□□ 2.06
TRIM54-201ENST00000296098 GTF2E1P29083 439 aaPredicted RBP27.94■■■□□ 2.06
TRIM54-201ENST00000296098 ANO6Q4KMQ2 910 aa27.94■■■□□ 2.06
TRIM54-201ENST00000296098 MICU3Q86XE3 530 aa27.94■■■□□ 2.06
TRIM54-201ENST00000296098 BCL2L12Q9HB09 334 aa27.94■■■□□ 2.06
TRIM54-201ENST00000296098 SENP2Q9HC62 589 aa27.94■■■□□ 2.06
TRIM54-201ENST00000296098 IQSEC3Q9UPP2 1182 aaPredicted RBP27.94■■■□□ 2.06
TRIM54-201ENST00000296098 THSD7AQ9UPZ6 1657 aa27.94■■■□□ 2.06
TRIM54-201ENST00000296098 GYG1P46976 350 aa27.94■■■□□ 2.06
TRIM54-201ENST00000296098 RC3H1Q5TC82 1133 aaKnown RBP27.94■■■□□ 2.06
TRIM54-201ENST00000296098 MIGA1Q8NAN2 632 aa27.94■■■□□ 2.06
TRIM54-201ENST00000296098 LIFRP42702 1097 aa27.93■■■□□ 2.06
TRIM54-201ENST00000296098 PLCB2Q00722 1185 aa27.93■■■□□ 2.06
TRIM54-201ENST00000296098 SLC10A5Q5PT55 438 aa27.93■■■□□ 2.06
TRIM54-201ENST00000296098 MFSD6Q6ZSS7 791 aa27.93■■■□□ 2.06
TRIM54-201ENST00000296098 PTF1AQ7RTS3 328 aa27.93■■■□□ 2.06
TRIM54-201ENST00000296098 STAG1Q8WVM7 1258 aa27.93■■■□□ 2.06
TRIM54-201ENST00000296098 NYXQ9GZU5 481 aa27.93■■■□□ 2.06
TRIM54-201ENST00000296098 INCENPQ9NQS7 918 aa27.93■■■□□ 2.06
TRIM54-201ENST00000296098 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.93■■■□□ 2.06
TRIM54-201ENST00000296098 CTAGE5O15320 804 aa27.92■■■□□ 2.06
TRIM54-201ENST00000296098 RXRAP19793 462 aa27.92■■■□□ 2.06
TRIM54-201ENST00000296098 CYP7A1P22680 504 aa27.92■■■□□ 2.06
TRIM54-201ENST00000296098 ZSWIM5Q9P217 1185 aa27.92■■■□□ 2.06
TRIM54-201ENST00000296098 NARFQ9UHQ1 456 aa27.92■■■□□ 2.06
TRIM54-201ENST00000296098 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP27.92■■■□□ 2.06
TRIM54-201ENST00000296098 GOLGA8AA7E2F4 631 aa27.92■■■□□ 2.06
TRIM54-201ENST00000296098 KIF23Q02241 960 aaPredicted RBP27.92■■■□□ 2.06
TRIM54-201ENST00000296098 FAM160A1Q05DH4 1040 aa27.92■■■□□ 2.06
TRIM54-201ENST00000296098 POLR3EQ9NVU0 708 aa27.92■■■□□ 2.06
TRIM54-201ENST00000296098 MINPP1Q9UNW1 487 aa27.92■■■□□ 2.06
TRIM54-201ENST00000296098 TACC3Q9Y6A5 838 aa27.92■■■□□ 2.06
TRIM54-201ENST00000296098 IFIT3O14879 490 aaKnown RBP27.91■■■□□ 2.06
TRIM54-201ENST00000296098 RPS6KA4O75676 772 aa27.91■■■□□ 2.06
TRIM54-201ENST00000296098 CDC27P30260 824 aa27.91■■■□□ 2.06
TRIM54-201ENST00000296098 CAVIN4Q5BKX8 364 aa27.91■■■□□ 2.06
TRIM54-201ENST00000296098 MYSM1Q5VVJ2 828 aa27.91■■■□□ 2.06
TRIM54-201ENST00000296098 ALG1Q9BT22 464 aa27.91■■■□□ 2.06
TRIM54-201ENST00000296098 CBX8Q9HC52 389 aa27.91■■■□□ 2.06
TRIM54-201ENST00000296098 GJB4Q9NTQ9 266 aa27.91■■■□□ 2.06
TRIM54-201ENST00000296098 UBAP1LF5GYI3 381 aa27.91■■■□□ 2.06
TRIM54-201ENST00000296098 AP5Z1O43299 807 aa27.91■■■□□ 2.06
TRIM54-201ENST00000296098 YEATS4O95619 227 aa27.91■■■□□ 2.06
TRIM54-201ENST00000296098 POLR3DP05423 398 aaPredicted RBP27.91■■■□□ 2.06
TRIM54-201ENST00000296098 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.91■■■□□ 2.06
TRIM54-201ENST00000296098 SMIM5Q71RC9 77 aa27.91■■■□□ 2.06
TRIM54-201ENST00000296098 FNBP4Q8N3X1 1017 aaPredicted RBP27.91■■■□□ 2.06
TRIM54-201ENST00000296098 FSIP1Q8NA03 581 aa27.91■■■□□ 2.06
TRIM54-201ENST00000296098 RAI14Q9P0K7 980 aa27.91■■■□□ 2.06
TRIM54-201ENST00000296098 ABCF2Q9UG63 623 aa27.91■■■□□ 2.06
TRIM54-201ENST00000296098 CACNA1SQ13698 1873 aa27.9■■■□□ 2.06
TRIM54-201ENST00000296098 KIF28PB7ZC32 967 aa27.9■■■□□ 2.06
TRIM54-201ENST00000296098 KINO60870 393 aaKnown RBP27.9■■■□□ 2.06
TRIM54-201ENST00000296098 OFD1O75665 1012 aa27.9■■■□□ 2.06
TRIM54-201ENST00000296098 SNW1Q13573 536 aaKnown RBP27.9■■■□□ 2.06
TRIM54-201ENST00000296098 STK38Q15208 465 aa27.9■■■□□ 2.06
TRIM54-201ENST00000296098 LUZP1Q86V48 1076 aa27.9■■■□□ 2.06
TRIM54-201ENST00000296098 LINC00301Q8NCQ3 95 aa27.9■■■□□ 2.06
TRIM54-201ENST00000296098 KCNG4Q8TDN1 519 aa27.9■■■□□ 2.06
TRIM54-201ENST00000296098 CELF1Q92879 486 aaKnown RBP27.9■■■□□ 2.06
TRIM54-201ENST00000296098 PCDHA7Q9UN72 937 aa27.9■■■□□ 2.06
TRIM54-201ENST00000296098 CCDC69A6NI79 296 aa27.89■■■□□ 2.06
TRIM54-201ENST00000296098 ADGRA1Q86SQ6 560 aa27.89■■■□□ 2.06
TRIM54-201ENST00000296098 ENGASEQ8NFI3 743 aa27.89■■■□□ 2.06
TRIM54-201ENST00000296098 MRPS27Q92552 414 aaKnown RBP27.89■■■□□ 2.06
TRIM54-201ENST00000296098 SRP68Q9UHB9 627 aaKnown RBP27.89■■■□□ 2.06
TRIM54-201ENST00000296098 SLC12A7Q9Y666 1083 aa27.89■■■□□ 2.06
TRIM54-201ENST00000296098 CLIC4Q9Y696 253 aa27.89■■■□□ 2.06
TRIM54-201ENST00000296098 NID2Q14112 1375 aa27.89■■■□□ 2.06
TRIM54-201ENST00000296098 GNPATO15228 680 aa27.89■■■□□ 2.05
TRIM54-201ENST00000296098 VPS37DQ86XT2 251 aa27.89■■■□□ 2.05
TRIM54-201ENST00000296098 CCDC144CPQ8IYA2 1237 aa27.89■■■□□ 2.05
TRIM54-201ENST00000296098 SETDB2Q96T68 719 aa27.89■■■□□ 2.05
TRIM54-201ENST00000296098 A0A1W2PQ27 194 aa27.88■■■□□ 2.05
TRIM54-201ENST00000296098 A0A1W2PQ64 194 aa27.88■■■□□ 2.05
TRIM54-201ENST00000296098 A0A1W2PQD8 194 aa27.88■■■□□ 2.05
TRIM54-201ENST00000296098 ADALQ6DHV7 355 aa27.88■■■□□ 2.05
TRIM54-201ENST00000296098 MYL10Q9BUA6 226 aa27.88■■■□□ 2.05
TRIM54-201ENST00000296098 RNF41Q9H4P4 317 aaPredicted RBP27.88■■■□□ 2.05
TRIM54-201ENST00000296098 TOMM22Q9NS69 142 aa27.88■■■□□ 2.05
TRIM54-201ENST00000296098 MAGEB6P1A0A0J9YX57 407 aa27.87■■■□□ 2.05
TRIM54-201ENST00000296098 CAVIN2O95810 425 aa27.87■■■□□ 2.05
TRIM54-201ENST00000296098 SART3Q15020 963 aaKnown RBP27.87■■■□□ 2.05
TRIM54-201ENST00000296098 SF3A1Q15459 793 aaKnown RBP27.87■■■□□ 2.05
TRIM54-201ENST00000296098 NTRK3Q16288 839 aa27.87■■■□□ 2.05
TRIM54-201ENST00000296098 RRP12Q5JTH9 1297 aaKnown RBP27.87■■■□□ 2.05
TRIM54-201ENST00000296098 SYNE3Q6ZMZ3 975 aa27.87■■■□□ 2.05
TRIM54-201ENST00000296098 NBPF5PQ86XG9 351 aaPredicted RBP27.87■■■□□ 2.05
TRIM54-201ENST00000296098 PHKBQ93100 1093 aa27.87■■■□□ 2.05
TRIM54-201ENST00000296098 AIFM3Q96NN9 605 aa27.87■■■□□ 2.05
TRIM54-201ENST00000296098 STK36Q9NRP7 1315 aa27.87■■■□□ 2.05
TRIM54-201ENST00000296098 WTIPA6NIX2 430 aaPredicted RBP27.87■■■□□ 2.05
TRIM54-201ENST00000296098 ZPR1O75312 459 aa27.87■■■□□ 2.05
TRIM54-201ENST00000296098 IARSP41252 1262 aaKnown RBP27.87■■■□□ 2.05
TRIM54-201ENST00000296098 MYH13Q9UKX3 1938 aa27.87■■■□□ 2.05
TRIM54-201ENST00000296098 PPARAQ07869 468 aa27.86■■■□□ 2.05
TRIM54-201ENST00000296098 MTA3Q9BTC8 594 aa27.86■■■□□ 2.05
TRIM54-201ENST00000296098 DNAJC25Q9H1X3 360 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms