RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 CENPHQ9H3R5 247 aa20.09■□□□□ 0.81
CDC42EP3-201ENST00000295324 ZBTB21Q9ULJ3 1066 aa20.09■□□□□ 0.81
CDC42EP3-201ENST00000295324 PRDM15P57071 1507 aaPredicted RBP20.09■□□□□ 0.81
CDC42EP3-201ENST00000295324 ERCC6L2Q5T890 1561 aa20.09■□□□□ 0.81
CDC42EP3-201ENST00000295324 OTUD7AQ8TE49 926 aaPredicted RBP20.09■□□□□ 0.81
CDC42EP3-201ENST00000295324 ARPP21Q9UBL0 812 aaPredicted RBP20.09■□□□□ 0.81
CDC42EP3-201ENST00000295324 GOPCQ9HD26 462 aa20.09■□□□□ 0.81
CDC42EP3-201ENST00000295324 ARAP3Q8WWN8 1544 aa20.09■□□□□ 0.81
CDC42EP3-201ENST00000295324 LETM2Q2VYF4 491 aa20.08■□□□□ 0.81
CDC42EP3-201ENST00000295324 APBB1IPQ7Z5R6 666 aaPredicted RBP20.08■□□□□ 0.81
CDC42EP3-201ENST00000295324 IQUBQ8NA54 791 aa20.08■□□□□ 0.81
CDC42EP3-201ENST00000295324 CTNNBL1Q8WYA6 563 aaPredicted RBP20.08■□□□□ 0.81
CDC42EP3-201ENST00000295324 DCAF15Q66K64 600 aa20.08■□□□□ 0.81
CDC42EP3-201ENST00000295324 LUZP1Q86V48 1076 aa20.08■□□□□ 0.81
CDC42EP3-201ENST00000295324 SGSM2O43147 1006 aa20.08■□□□□ 0.8
CDC42EP3-201ENST00000295324 IRX3P78415 501 aaPredicted RBP20.08■□□□□ 0.8
CDC42EP3-201ENST00000295324 DNM1Q05193 864 aaKnown RBP20.08■□□□□ 0.8
CDC42EP3-201ENST00000295324 RILPL1Q5EBL4 403 aa20.08■□□□□ 0.8
CDC42EP3-201ENST00000295324 ATL3Q6DD88 541 aa20.08■□□□□ 0.8
CDC42EP3-201ENST00000295324 MAP3K4Q9Y6R4 1608 aa20.08■□□□□ 0.8
CDC42EP3-201ENST00000295324 BEND3Q5T5X7 828 aa20.08■□□□□ 0.8
CDC42EP3-201ENST00000295324 FAM227BQ96M60 508 aa20.08■□□□□ 0.8
CDC42EP3-201ENST00000295324 DKC1O60832 514 aaKnown RBP eCLIP20.07■□□□□ 0.8
CDC42EP3-201ENST00000295324 SERPINB2P05120 415 aa20.07■□□□□ 0.8
CDC42EP3-201ENST00000295324 SSH3Q8TE77 659 aa20.07■□□□□ 0.8
CDC42EP3-201ENST00000295324 GPHNQ9NQX3 736 aaPredicted RBP20.07■□□□□ 0.8
CDC42EP3-201ENST00000295324 NOD1Q9Y239 953 aa20.07■□□□□ 0.8
CDC42EP3-201ENST00000295324 AKR1B10O60218 316 aa20.07■□□□□ 0.8
CDC42EP3-201ENST00000295324 TAX1BP1Q86VP1 789 aa20.07■□□□□ 0.8
CDC42EP3-201ENST00000295324 FERMT1Q9BQL6 677 aa20.07■□□□□ 0.8
CDC42EP3-201ENST00000295324 GBP3Q9H0R5 595 aa20.07■□□□□ 0.8
CDC42EP3-201ENST00000295324 SYNCQ9H7C4 482 aa20.07■□□□□ 0.8
CDC42EP3-201ENST00000295324 AS3MTQ9HBK9 375 aa20.07■□□□□ 0.8
CDC42EP3-201ENST00000295324 NOP2P46087 812 aaKnown RBP20.07■□□□□ 0.8
CDC42EP3-201ENST00000295324 KIF18AQ8NI77 898 aa20.06■□□□□ 0.8
CDC42EP3-201ENST00000295324 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.06■□□□□ 0.8
CDC42EP3-201ENST00000295324 V9GY48 417 aaPredicted RBP20.06■□□□□ 0.8
CDC42EP3-201ENST00000295324 UBE4AQ14139 1066 aa20.06■□□□□ 0.8
CDC42EP3-201ENST00000295324 FAM182BQ5T319 152 aa20.06■□□□□ 0.8
CDC42EP3-201ENST00000295324 LEKR1Q6ZMV7 388 aa20.06■□□□□ 0.8
CDC42EP3-201ENST00000295324 GYG1P46976 350 aa20.06■□□□□ 0.8
CDC42EP3-201ENST00000295324 UVSSAQ2YD98 709 aa20.06■□□□□ 0.8
CDC42EP3-201ENST00000295324 DACT1Q9NYF0 836 aa20.06■□□□□ 0.8
CDC42EP3-201ENST00000295324 TMCO5BA8MYB1 307 aa20.06■□□□□ 0.8
CDC42EP3-201ENST00000295324 KIF4AO95239 1232 aa20.06■□□□□ 0.8
CDC42EP3-201ENST00000295324 ESPNB1AK53 854 aa20.05■□□□□ 0.8
CDC42EP3-201ENST00000295324 CHRNDQ07001 517 aa20.05■□□□□ 0.8
CDC42EP3-201ENST00000295324 IFI16Q16666 785 aaKnown RBP20.05■□□□□ 0.8
CDC42EP3-201ENST00000295324 TSPYL1Q9H0U9 437 aa20.05■□□□□ 0.8
CDC42EP3-201ENST00000295324 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.05■□□□□ 0.8
CDC42EP3-201ENST00000295324 BICDL2A1A5D9 508 aa20.05■□□□□ 0.8
CDC42EP3-201ENST00000295324 GIMAP6Q6P9H5 292 aa20.05■□□□□ 0.8
CDC42EP3-201ENST00000295324 ZSCAN30Q86W11 494 aa20.05■□□□□ 0.8
CDC42EP3-201ENST00000295324 ABCC4O15439 1325 aa20.05■□□□□ 0.8
CDC42EP3-201ENST00000295324 CASQ1P31415 396 aa20.05■□□□□ 0.8
CDC42EP3-201ENST00000295324 TFAP4Q01664 338 aa20.05■□□□□ 0.8
CDC42EP3-201ENST00000295324 HOOK3Q86VS8 718 aa20.05■□□□□ 0.8
CDC42EP3-201ENST00000295324 CPXCR1Q8N123 301 aa20.05■□□□□ 0.8
CDC42EP3-201ENST00000295324 LLPHQ9BRT6 129 aaKnown RBP20.05■□□□□ 0.8
CDC42EP3-201ENST00000295324 LEMD3Q9Y2U8 911 aa20.05■□□□□ 0.8
CDC42EP3-201ENST00000295324 XDHP47989 1333 aa20.05■□□□□ 0.8
CDC42EP3-201ENST00000295324 GOLGA6L9A6NEM1 432 aa20.05■□□□□ 0.8
CDC42EP3-201ENST00000295324 BRPF3Q9ULD4 1205 aa20.05■□□□□ 0.8
CDC42EP3-201ENST00000295324 SHROOM2Q13796 1616 aa20.05■□□□□ 0.8
CDC42EP3-201ENST00000295324 BLMP54132 1417 aaPredicted RBP20.05■□□□□ 0.8
CDC42EP3-201ENST00000295324 GSTTP1A0A1W2PQM5 241 aa20.05■□□□□ 0.8
CDC42EP3-201ENST00000295324 DNA2P51530 1060 aa20.05■□□□□ 0.8
CDC42EP3-201ENST00000295324 C8orf34Q49A92 452 aa20.05■□□□□ 0.8
CDC42EP3-201ENST00000295324 SMCR8Q8TEV9 937 aaPredicted RBP20.05■□□□□ 0.8
CDC42EP3-201ENST00000295324 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.05■□□□□ 0.8
CDC42EP3-201ENST00000295324 KIF1BO60333 1816 aa20.04■□□□□ 0.8
CDC42EP3-201ENST00000295324 ZNF804BA4D1E1 1349 aa20.04■□□□□ 0.8
CDC42EP3-201ENST00000295324 BBOX1O75936 387 aa20.04■□□□□ 0.8
CDC42EP3-201ENST00000295324 DOK7Q18PE1 504 aa20.04■□□□□ 0.8
CDC42EP3-201ENST00000295324 KIAA0825Q8IV33 1275 aa20.04■□□□□ 0.8
CDC42EP3-201ENST00000295324 TNNT1P13805 278 aa20.04■□□□□ 0.8
CDC42EP3-201ENST00000295324 EZRP15311 586 aaKnown RBP20.04■□□□□ 0.8
CDC42EP3-201ENST00000295324 PLCD1P51178 756 aa20.04■□□□□ 0.8
CDC42EP3-201ENST00000295324 SULF1Q8IWU6 871 aa20.04■□□□□ 0.8
CDC42EP3-201ENST00000295324 CHURC1Q8WUH1 139 aa20.04■□□□□ 0.8
CDC42EP3-201ENST00000295324 DSCC1Q9BVC3 393 aa20.04■□□□□ 0.8
CDC42EP3-201ENST00000295324 A2ML1A8K2U0 1454 aa20.04■□□□□ 0.8
CDC42EP3-201ENST00000295324 UBASH3AP57075 661 aa20.04■□□□□ 0.8
CDC42EP3-201ENST00000295324 HAUS3Q68CZ6 603 aa20.04■□□□□ 0.8
CDC42EP3-201ENST00000295324 PKD2L1Q9P0L9 805 aa20.04■□□□□ 0.8
CDC42EP3-201ENST00000295324 CTDSPL2Q05D32 466 aa20.03■□□□□ 0.8
CDC42EP3-201ENST00000295324 NSMFQ6X4W1 530 aa20.03■□□□□ 0.8
CDC42EP3-201ENST00000295324 CLASP1Q7Z460 1538 aa20.03■□□□□ 0.8
CDC42EP3-201ENST00000295324 PPEF1O14829 653 aaPredicted RBP20.03■□□□□ 0.8
CDC42EP3-201ENST00000295324 URI1O94763 535 aaPredicted RBP20.03■□□□□ 0.8
CDC42EP3-201ENST00000295324 PPM1FP49593 454 aaPredicted RBP20.03■□□□□ 0.8
CDC42EP3-201ENST00000295324 DCPSQ96C86 337 aaKnown RBP20.03■□□□□ 0.8
CDC42EP3-201ENST00000295324 NOP56O00567 594 aaKnown RBP20.03■□□□□ 0.8
CDC42EP3-201ENST00000295324 CCDC65Q8IXS2 484 aa20.03■□□□□ 0.8
CDC42EP3-201ENST00000295324 NDUFB9Q9Y6M9 179 aa20.03■□□□□ 0.8
CDC42EP3-201ENST00000295324 AKNAD1Q5T1N1 836 aa20.03■□□□□ 0.8
CDC42EP3-201ENST00000295324 PKNOX2Q96KN3 472 aa20.02■□□□□ 0.8
CDC42EP3-201ENST00000295324 STK24Q9Y6E0 443 aa20.02■□□□□ 0.8
CDC42EP3-201ENST00000295324 PLVAPQ9BX97 442 aa20.02■□□□□ 0.8
CDC42EP3-201ENST00000295324 BCAMP50895 628 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms