RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 CLUL1Q15846 466 aa19.75■□□□□ 0.75
PCDHA13-201ENST00000289272 CABP5Q9NP86 173 aa19.75■□□□□ 0.75
PCDHA13-201ENST00000289272 FBXO3Q9UK99 471 aa19.75■□□□□ 0.75
PCDHA13-201ENST00000289272 ARHGEF10O15013 1369 aa19.75■□□□□ 0.75
PCDHA13-201ENST00000289272 FANCCQ00597 558 aa19.75■□□□□ 0.75
PCDHA13-201ENST00000289272 TFCP2Q12800 502 aa19.75■□□□□ 0.75
PCDHA13-201ENST00000289272 LRRC45Q96CN5 670 aa19.75■□□□□ 0.75
PCDHA13-201ENST00000289272 MTRF1LQ9UGC7 380 aaKnown RBP19.75■□□□□ 0.75
PCDHA13-201ENST00000289272 ZFYVE16Q7Z3T8 1539 aa19.74■□□□□ 0.75
PCDHA13-201ENST00000289272 RNF113AO15541 343 aaKnown RBP19.74■□□□□ 0.75
PCDHA13-201ENST00000289272 FAM71BQ8TC56 605 aa19.74■□□□□ 0.75
PCDHA13-201ENST00000289272 PLEKHF1Q96S99 279 aa19.74■□□□□ 0.75
PCDHA13-201ENST00000289272 LZTFL1Q9NQ48 299 aa19.74■□□□□ 0.75
PCDHA13-201ENST00000289272 CLNS1AP54105 237 aaKnown RBP19.74■□□□□ 0.75
PCDHA13-201ENST00000289272 KARSQ15046 597 aaKnown RBP19.74■□□□□ 0.75
PCDHA13-201ENST00000289272 DRC1Q96MC2 740 aa19.74■□□□□ 0.75
PCDHA13-201ENST00000289272 USP19O94966 1318 aa19.74■□□□□ 0.75
PCDHA13-201ENST00000289272 PTPDC1A2A3K4 754 aa19.74■□□□□ 0.75
PCDHA13-201ENST00000289272 IFT20Q8IY31 132 aa19.74■□□□□ 0.75
PCDHA13-201ENST00000289272 NUP58Q9BVL2 599 aa19.74■□□□□ 0.75
PCDHA13-201ENST00000289272 PPP4R3AQ6IN85 833 aa19.74■□□□□ 0.75
PCDHA13-201ENST00000289272 PLEKHG3A1L390 1219 aa19.73■□□□□ 0.75
PCDHA13-201ENST00000289272 RPS6KB1P23443 525 aa19.73■□□□□ 0.75
PCDHA13-201ENST00000289272 SGSM2O43147 1006 aa19.73■□□□□ 0.75
PCDHA13-201ENST00000289272 WTAPQ15007 396 aa19.73■□□□□ 0.75
PCDHA13-201ENST00000289272 STIM2Q9P246 746 aa19.73■□□□□ 0.75
PCDHA13-201ENST00000289272 LEO1Q8WVC0 666 aaPredicted RBP19.73■□□□□ 0.75
PCDHA13-201ENST00000289272 PNMA6EA0A0J9YXQ4 647 aa19.72■□□□□ 0.75
PCDHA13-201ENST00000289272 TRIM75PA6NK02 468 aa19.72■□□□□ 0.75
PCDHA13-201ENST00000289272 GOLGA8KD6RF30 607 aa19.72■□□□□ 0.75
PCDHA13-201ENST00000289272 PRC1O43663 620 aa19.72■□□□□ 0.75
PCDHA13-201ENST00000289272 GBP1P32455 592 aa19.72■□□□□ 0.75
PCDHA13-201ENST00000289272 NAP1L3Q99457 506 aaPredicted RBP19.72■□□□□ 0.75
PCDHA13-201ENST00000289272 PAIP2Q9BPZ3 127 aaKnown RBP19.72■□□□□ 0.75
PCDHA13-201ENST00000289272 GUCA1BQ9UMX6 200 aa19.72■□□□□ 0.75
PCDHA13-201ENST00000289272 GOLGA6BA6NDN3 693 aa19.72■□□□□ 0.75
PCDHA13-201ENST00000289272 ZEB2O60315 1214 aa19.72■□□□□ 0.75
PCDHA13-201ENST00000289272 SLC8A1P32418 973 aa19.72■□□□□ 0.75
PCDHA13-201ENST00000289272 APBA1Q02410 837 aa19.72■□□□□ 0.75
PCDHA13-201ENST00000289272 CCDC26Q8TAB7 109 aa19.72■□□□□ 0.75
PCDHA13-201ENST00000289272 CFAP65Q6ZU64 1925 aaKnown RBP19.72■□□□□ 0.75
PCDHA13-201ENST00000289272 STAT6P42226 847 aa19.72■□□□□ 0.75
PCDHA13-201ENST00000289272 UBE4AQ14139 1066 aa19.72■□□□□ 0.75
PCDHA13-201ENST00000289272 ISM2Q6H9L7 571 aa19.72■□□□□ 0.75
PCDHA13-201ENST00000289272 DAAM2Q86T65 1068 aa19.72■□□□□ 0.75
PCDHA13-201ENST00000289272 CALM1P0DP23 149 aa19.72■□□□□ 0.75
PCDHA13-201ENST00000289272 CALM2P0DP24 149 aa19.72■□□□□ 0.75
PCDHA13-201ENST00000289272 CALM3P0DP25 149 aa19.72■□□□□ 0.75
PCDHA13-201ENST00000289272 TBC1D5Q92609 795 aa19.72■□□□□ 0.75
PCDHA13-201ENST00000289272 KAT14Q9H8E8 782 aa19.72■□□□□ 0.75
PCDHA13-201ENST00000289272 SNX14Q9Y5W7 946 aa19.72■□□□□ 0.75
PCDHA13-201ENST00000289272 A0A1W2PRG0 241 aa19.71■□□□□ 0.75
PCDHA13-201ENST00000289272 MTMR3Q13615 1198 aa19.71■□□□□ 0.75
PCDHA13-201ENST00000289272 PHACTR2O75167 634 aa19.71■□□□□ 0.75
PCDHA13-201ENST00000289272 SLC9C2Q5TAH2 1124 aa19.71■□□□□ 0.75
PCDHA13-201ENST00000289272 EFCAB13Q8IY85 973 aa19.71■□□□□ 0.75
PCDHA13-201ENST00000289272 FAM135BQ49AJ0 1406 aa19.71■□□□□ 0.75
PCDHA13-201ENST00000289272 CCDC122Q5T0U0 273 aa19.71■□□□□ 0.75
PCDHA13-201ENST00000289272 RGS12O14924 1447 aa19.7■□□□□ 0.74
PCDHA13-201ENST00000289272 RTL9Q8NET4 1388 aa19.7■□□□□ 0.74
PCDHA13-201ENST00000289272 ALDH3A1P30838 453 aa19.7■□□□□ 0.74
PCDHA13-201ENST00000289272 CPA1P15085 419 aa19.7■□□□□ 0.74
PCDHA13-201ENST00000289272 GNAT2P19087 354 aa19.7■□□□□ 0.74
PCDHA13-201ENST00000289272 GNAQP50148 359 aa19.7■□□□□ 0.74
PCDHA13-201ENST00000289272 CCDC38Q502W7 563 aa19.7■□□□□ 0.74
PCDHA13-201ENST00000289272 TPTE2Q6XPS3 522 aa19.7■□□□□ 0.74
PCDHA13-201ENST00000289272 CACNA2D3Q8IZS8 1091 aa19.7■□□□□ 0.74
PCDHA13-201ENST00000289272 JAKMIP2Q96AA8 810 aa19.7■□□□□ 0.74
PCDHA13-201ENST00000289272 TSPY2A6NKD2 308 aa19.69■□□□□ 0.74
PCDHA13-201ENST00000289272 ATP2C2O75185 946 aa19.69■□□□□ 0.74
PCDHA13-201ENST00000289272 UBXN1Q04323 297 aa19.69■□□□□ 0.74
PCDHA13-201ENST00000289272 APOBRQ0VD83 1088 aa19.69■□□□□ 0.74
PCDHA13-201ENST00000289272 TSNAXIP1Q2TAA8 658 aa19.69■□□□□ 0.74
PCDHA13-201ENST00000289272 KIAA1524Q8TCG1 905 aa19.69■□□□□ 0.74
PCDHA13-201ENST00000289272 HELLSQ9NRZ9 838 aa19.69■□□□□ 0.74
PCDHA13-201ENST00000289272 PLA2R1Q13018 1463 aa19.69■□□□□ 0.74
PCDHA13-201ENST00000289272 ETF1P62495 437 aaKnown RBP19.69■□□□□ 0.74
PCDHA13-201ENST00000289272 GAS2L3Q86XJ1 694 aa19.69■□□□□ 0.74
PCDHA13-201ENST00000289272 RABGGTAQ92696 567 aa19.69■□□□□ 0.74
PCDHA13-201ENST00000289272 VCXQ9H320 206 aa19.69■□□□□ 0.74
PCDHA13-201ENST00000289272 HDAC9Q9UKV0 1011 aa19.69■□□□□ 0.74
PCDHA13-201ENST00000289272 CUTAO60888 179 aa19.69■□□□□ 0.74
PCDHA13-201ENST00000289272 PAK2Q13177 524 aa19.69■□□□□ 0.74
PCDHA13-201ENST00000289272 RTN1Q16799 776 aa19.69■□□□□ 0.74
PCDHA13-201ENST00000289272 DHX37Q8IY37 1157 aaKnown RBP19.69■□□□□ 0.74
PCDHA13-201ENST00000289272 PLCD3Q8N3E9 789 aa19.69■□□□□ 0.74
PCDHA13-201ENST00000289272 IGSF22Q8N9C0 903 aa19.69■□□□□ 0.74
PCDHA13-201ENST00000289272 RNF216Q9NWF9 866 aaPredicted RBP19.69■□□□□ 0.74
PCDHA13-201ENST00000289272 SPAG5Q96R06 1193 aa19.69■□□□□ 0.74
PCDHA13-201ENST00000289272 GSPT1P15170 499 aaKnown RBP19.68■□□□□ 0.74
PCDHA13-201ENST00000289272 VWA3BQ502W6 1294 aa19.68■□□□□ 0.74
PCDHA13-201ENST00000289272 ZNF804AQ7Z570 1209 aa19.68■□□□□ 0.74
PCDHA13-201ENST00000289272 IQUBQ8NA54 791 aa19.68■□□□□ 0.74
PCDHA13-201ENST00000289272 SREK1Q8WXA9 508 aaKnown RBP19.68■□□□□ 0.74
PCDHA13-201ENST00000289272 SMC6Q96SB8 1091 aa19.68■□□□□ 0.74
PCDHA13-201ENST00000289272 ATP2A1O14983 1001 aa19.68■□□□□ 0.74
PCDHA13-201ENST00000289272 CALML3P27482 149 aa19.68■□□□□ 0.74
PCDHA13-201ENST00000289272 ESR2Q92731 530 aa19.68■□□□□ 0.74
PCDHA13-201ENST00000289272 DNA2P51530 1060 aa19.68■□□□□ 0.74
PCDHA13-201ENST00000289272 DZIP3Q86Y13 1208 aaKnown RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms