RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 IGDCC4Q8TDY8 1250 aa22.57■■□□□ 1.2
BRAF-201ENST00000288602 ZKSCAN3Q9BRR0 538 aa22.57■■□□□ 1.2
BRAF-201ENST00000288602 WDR19Q8NEZ3 1342 aa22.57■■□□□ 1.2
BRAF-201ENST00000288602 DHX16O60231 1041 aaKnown RBP22.57■■□□□ 1.2
BRAF-201ENST00000288602 AIFM3Q96NN9 605 aa22.57■■□□□ 1.2
BRAF-201ENST00000288602 GNL3LQ9NVN8 582 aaKnown RBP22.57■■□□□ 1.2
BRAF-201ENST00000288602 A0A1B0GUL6 1792 aa22.57■■□□□ 1.2
BRAF-201ENST00000288602 NHSQ6T4R5 1651 aa22.57■■□□□ 1.2
BRAF-201ENST00000288602 CDC27P30260 824 aa22.56■■□□□ 1.2
BRAF-201ENST00000288602 NFXL1Q6ZNB6 911 aa22.56■■□□□ 1.2
BRAF-201ENST00000288602 FAM196AQ6ZSG2 479 aa22.56■■□□□ 1.2
BRAF-201ENST00000288602 C8orf76Q96K31 380 aa22.56■■□□□ 1.2
BRAF-201ENST00000288602 NUP62CLQ9H1M0 184 aa22.56■■□□□ 1.2
BRAF-201ENST00000288602 POLR3DP05423 398 aaPredicted RBP22.56■■□□□ 1.2
BRAF-201ENST00000288602 RFC4P35249 363 aa22.56■■□□□ 1.2
BRAF-201ENST00000288602 METAP2P50579 478 aaKnown RBP eCLIP22.56■■□□□ 1.2
BRAF-201ENST00000288602 APOA5Q6Q788 366 aa22.56■■□□□ 1.2
BRAF-201ENST00000288602 HSPA1LP34931 641 aa22.55■■□□□ 1.2
BRAF-201ENST00000288602 TMEM67Q5HYA8 995 aa22.55■■□□□ 1.2
BRAF-201ENST00000288602 AKNAD1Q5T1N1 836 aa22.55■■□□□ 1.2
BRAF-201ENST00000288602 PHKBQ93100 1093 aa22.55■■□□□ 1.2
BRAF-201ENST00000288602 LY9Q9HBG7 655 aa22.55■■□□□ 1.2
BRAF-201ENST00000288602 LRRC4BQ9NT99 713 aa22.55■■□□□ 1.2
BRAF-201ENST00000288602 JAG2Q9Y219 1238 aa22.55■■□□□ 1.2
BRAF-201ENST00000288602 DYNLL1P63167 89 aaKnown RBP22.55■■□□□ 1.2
BRAF-201ENST00000288602 MFSD6Q6ZSS7 791 aa22.55■■□□□ 1.2
BRAF-201ENST00000288602 NACAP1Q9BZK3 213 aa22.55■■□□□ 1.2
BRAF-201ENST00000288602 PNPLA7Q6ZV29 1317 aa22.55■■□□□ 1.2
BRAF-201ENST00000288602 SEPT12Q8IYM1 358 aa22.54■■□□□ 1.2
BRAF-201ENST00000288602 ZNF384Q8TF68 577 aa22.54■■□□□ 1.2
BRAF-201ENST00000288602 USP25Q9UHP3 1055 aa22.54■■□□□ 1.2
BRAF-201ENST00000288602 MYH15Q9Y2K3 1946 aa22.54■■□□□ 1.2
BRAF-201ENST00000288602 MINDY4BA8MYZ0 360 aa22.54■■□□□ 1.2
BRAF-201ENST00000288602 IFIT3O14879 490 aaKnown RBP22.54■■□□□ 1.2
BRAF-201ENST00000288602 TRAPPC3LQ5T215 181 aa22.54■■□□□ 1.2
BRAF-201ENST00000288602 CHMP4CQ96CF2 233 aa22.54■■□□□ 1.2
BRAF-201ENST00000288602 ZMYM6O95789 1325 aa22.54■■□□□ 1.2
BRAF-201ENST00000288602 TNMDQ9H2S6 317 aa22.53■■□□□ 1.2
BRAF-201ENST00000288602 CHD4Q14839 1912 aa22.53■■□□□ 1.2
BRAF-201ENST00000288602 MAGEB6P1A0A0J9YX57 407 aa22.53■■□□□ 1.2
BRAF-201ENST00000288602 UBE2Q2LH0YL09 131 aa22.53■■□□□ 1.2
BRAF-201ENST00000288602 GNAT2P19087 354 aa22.53■■□□□ 1.2
BRAF-201ENST00000288602 TM4SF1P30408 202 aa22.53■■□□□ 1.2
BRAF-201ENST00000288602 MAP3K11Q16584 847 aa22.53■■□□□ 1.2
BRAF-201ENST00000288602 TXNRD3Q86VQ6 643 aa22.53■■□□□ 1.2
BRAF-201ENST00000288602 FBXO18Q8NFZ0 1043 aa22.53■■□□□ 1.2
BRAF-201ENST00000288602 TMEM87BQ96K49 555 aa22.53■■□□□ 1.2
BRAF-201ENST00000288602 TAF1LQ8IZX4 1826 aa22.52■■□□□ 1.2
BRAF-201ENST00000288602 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.52■■□□□ 1.2
BRAF-201ENST00000288602 C4AP0C0L4 1744 aa22.52■■□□□ 1.2
BRAF-201ENST00000288602 C4BP0C0L5 1744 aa22.52■■□□□ 1.2
BRAF-201ENST00000288602 ZBTB43O43298 467 aa22.52■■□□□ 1.2
BRAF-201ENST00000288602 MPNDQ8N594 471 aa22.52■■□□□ 1.2
BRAF-201ENST00000288602 RCOR1Q9UKL0 485 aa22.52■■□□□ 1.2
BRAF-201ENST00000288602 CYP2D7A0A087X1C5 515 aa22.51■■□□□ 1.19
BRAF-201ENST00000288602 KIF28PB7ZC32 967 aa22.51■■□□□ 1.19
BRAF-201ENST00000288602 CLCN1P35523 988 aa22.51■■□□□ 1.19
BRAF-201ENST00000288602 FBXO33Q7Z6M2 555 aa22.51■■□□□ 1.19
BRAF-201ENST00000288602 PPARAQ07869 468 aa22.51■■□□□ 1.19
BRAF-201ENST00000288602 CHAF1AQ13111 956 aaPredicted RBP22.51■■□□□ 1.19
BRAF-201ENST00000288602 NFIXQ14938 502 aa22.51■■□□□ 1.19
BRAF-201ENST00000288602 ZNF396Q96N95 335 aaPredicted RBP22.51■■□□□ 1.19
BRAF-201ENST00000288602 RIOK1Q9BRS2 568 aaKnown RBP22.51■■□□□ 1.19
BRAF-201ENST00000288602 RGL2O15211 777 aa22.5■■□□□ 1.19
BRAF-201ENST00000288602 PLCB2Q00722 1185 aa22.5■■□□□ 1.19
BRAF-201ENST00000288602 STAG1Q8WVM7 1258 aa22.5■■□□□ 1.19
BRAF-201ENST00000288602 GOLPH3LQ9H4A5 285 aa22.5■■□□□ 1.19
BRAF-201ENST00000288602 FAM217BQ9NTX9 383 aaPredicted RBP22.5■■□□□ 1.19
BRAF-201ENST00000288602 SBF2Q86WG5 1849 aa22.5■■□□□ 1.19
BRAF-201ENST00000288602 GOLGA8AA7E2F4 631 aa22.5■■□□□ 1.19
BRAF-201ENST00000288602 CCDC192P0DO97 292 aa22.5■■□□□ 1.19
BRAF-201ENST00000288602 CCAR1Q8IX12 1150 aaKnown RBP22.5■■□□□ 1.19
BRAF-201ENST00000288602 KRT23Q9C075 422 aa22.5■■□□□ 1.19
BRAF-201ENST00000288602 CNNM2Q9H8M5 875 aa22.5■■□□□ 1.19
BRAF-201ENST00000288602 SLC12A7Q9Y666 1083 aa22.5■■□□□ 1.19
BRAF-201ENST00000288602 CLIC4Q9Y696 253 aa22.5■■□□□ 1.19
BRAF-201ENST00000288602 COL24A1Q17RW2 1714 aa22.5■■□□□ 1.19
BRAF-201ENST00000288602 CACNA1SQ13698 1873 aa22.49■■□□□ 1.19
BRAF-201ENST00000288602 CCDC69A6NI79 296 aa22.49■■□□□ 1.19
BRAF-201ENST00000288602 HIBADHP31937 336 aaKnown RBP22.49■■□□□ 1.19
BRAF-201ENST00000288602 ME1P48163 572 aa22.49■■□□□ 1.19
BRAF-201ENST00000288602 CLSTN2Q9H4D0 955 aa22.49■■□□□ 1.19
BRAF-201ENST00000288602 LY75O60449 1722 aa22.49■■□□□ 1.19
BRAF-201ENST00000288602 RANBP6O60518 1105 aaKnown RBP22.49■■□□□ 1.19
BRAF-201ENST00000288602 SGMS1Q86VZ5 419 aa22.49■■□□□ 1.19
BRAF-201ENST00000288602 ALG1Q9BT22 464 aa22.49■■□□□ 1.19
BRAF-201ENST00000288602 DDX19AQ9NUU7 478 aaKnown RBP22.49■■□□□ 1.19
BRAF-201ENST00000288602 EVX2Q03828 476 aa22.48■■□□□ 1.19
BRAF-201ENST00000288602 TYRO3Q06418 890 aa22.48■■□□□ 1.19
BRAF-201ENST00000288602 ZSCAN30Q86W11 494 aa22.48■■□□□ 1.19
BRAF-201ENST00000288602 TNRC6CQ9HCJ0 1690 aaKnown RBP22.48■■□□□ 1.19
BRAF-201ENST00000288602 PRDX5P30044 214 aa22.48■■□□□ 1.19
BRAF-201ENST00000288602 NTRK3Q16288 839 aa22.48■■□□□ 1.19
BRAF-201ENST00000288602 CMTR1Q8N1G2 835 aaKnown RBP22.48■■□□□ 1.19
BRAF-201ENST00000288602 CCDC82Q8N4S0 544 aa22.48■■□□□ 1.19
BRAF-201ENST00000288602 MRVI1Q9Y6F6 885 aa22.48■■□□□ 1.19
BRAF-201ENST00000288602 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.47■■□□□ 1.19
BRAF-201ENST00000288602 LIFRP42702 1097 aa22.47■■□□□ 1.19
BRAF-201ENST00000288602 MECOMQ03112 1051 aa22.47■■□□□ 1.19
BRAF-201ENST00000288602 UVSSAQ2YD98 709 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms