RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 C4AP0C0L4 1744 aa21.38■■□□□ 1.01
PDLIM3-201ENST00000284767 CCT2P78371 535 aaKnown RBP21.38■■□□□ 1.01
PDLIM3-201ENST00000284767 PLA2G4DQ86XP0 818 aa21.38■■□□□ 1.01
PDLIM3-201ENST00000284767 TDRD7Q8NHU6 1098 aaKnown RBP21.38■■□□□ 1.01
PDLIM3-201ENST00000284767 DDX11Q96FC9 970 aa21.38■■□□□ 1.01
PDLIM3-201ENST00000284767 GTPBP4Q9BZE4 634 aaKnown RBP21.38■■□□□ 1.01
PDLIM3-201ENST00000284767 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.38■■□□□ 1.01
PDLIM3-201ENST00000284767 HMGB1P09429 215 aaKnown RBP21.38■■□□□ 1.01
PDLIM3-201ENST00000284767 NFIXQ14938 502 aa21.38■■□□□ 1.01
PDLIM3-201ENST00000284767 SYCP1Q15431 976 aa21.38■■□□□ 1.01
PDLIM3-201ENST00000284767 CTNNA3Q9UI47 895 aa21.38■■□□□ 1.01
PDLIM3-201ENST00000284767 CAVIN2O95810 425 aa21.37■■□□□ 1.01
PDLIM3-201ENST00000284767 FAM173BQ6P4H8 233 aa21.37■■□□□ 1.01
PDLIM3-201ENST00000284767 LEO1Q8WVC0 666 aaPredicted RBP21.37■■□□□ 1.01
PDLIM3-201ENST00000284767 AIDAQ96BJ3 306 aa21.37■■□□□ 1.01
PDLIM3-201ENST00000284767 ARMT1Q9H993 441 aa21.37■■□□□ 1.01
PDLIM3-201ENST00000284767 NCOA5Q9HCD5 579 aaKnown RBP21.37■■□□□ 1.01
PDLIM3-201ENST00000284767 MBD4O95243 580 aa21.37■■□□□ 1.01
PDLIM3-201ENST00000284767 ZNF75DP51815 510 aa21.37■■□□□ 1.01
PDLIM3-201ENST00000284767 RPS8P62241 208 aaKnown RBP21.37■■□□□ 1.01
PDLIM3-201ENST00000284767 CBX1P83916 185 aa21.37■■□□□ 1.01
PDLIM3-201ENST00000284767 CCDC186Q7Z3E2 898 aa21.37■■□□□ 1.01
PDLIM3-201ENST00000284767 STRBPQ96SI9 672 aaKnown RBP21.37■■□□□ 1.01
PDLIM3-201ENST00000284767 ZNF213O14771 459 aa21.36■■□□□ 1.01
PDLIM3-201ENST00000284767 MAP3K12Q12852 859 aa21.36■■□□□ 1.01
PDLIM3-201ENST00000284767 CKAP2LQ8IYA6 745 aa21.36■■□□□ 1.01
PDLIM3-201ENST00000284767 INCENPQ9NQS7 918 aa21.36■■□□□ 1.01
PDLIM3-201ENST00000284767 ABCF2Q9UG63 623 aa21.36■■□□□ 1.01
PDLIM3-201ENST00000284767 COL24A1Q17RW2 1714 aa21.36■■□□□ 1.01
PDLIM3-201ENST00000284767 COL1A1P02452 1464 aaPredicted RBP21.36■■□□□ 1.01
PDLIM3-201ENST00000284767 TBC1D10CQ8IV04 446 aa21.36■■□□□ 1.01
PDLIM3-201ENST00000284767 MIGA1Q8NAN2 632 aa21.36■■□□□ 1.01
PDLIM3-201ENST00000284767 A0A1B0GUL6 1792 aa21.35■■□□□ 1.01
PDLIM3-201ENST00000284767 PRKAB2O43741 272 aa21.35■■□□□ 1.01
PDLIM3-201ENST00000284767 TM4SF1P30408 202 aa21.35■■□□□ 1.01
PDLIM3-201ENST00000284767 RAB11FIP4Q86YS3 637 aa21.35■■□□□ 1.01
PDLIM3-201ENST00000284767 LRP2BPQ9P2M1 347 aa21.35■■□□□ 1.01
PDLIM3-201ENST00000284767 KRT27Q7Z3Y8 459 aa21.35■■□□□ 1.01
PDLIM3-201ENST00000284767 DRC7Q8IY82 874 aa21.35■■□□□ 1.01
PDLIM3-201ENST00000284767 AGXT2Q9BYV1 514 aa21.35■■□□□ 1.01
PDLIM3-201ENST00000284767 TRIM5Q9C035 493 aa21.35■■□□□ 1.01
PDLIM3-201ENST00000284767 EPB41L4AQ9HCS5 686 aaPredicted RBP21.35■■□□□ 1.01
PDLIM3-201ENST00000284767 SMTNL1A8MU46 457 aa21.34■■□□□ 1.01
PDLIM3-201ENST00000284767 FOSBP53539 338 aa21.34■■□□□ 1.01
PDLIM3-201ENST00000284767 ANTXR2P58335 489 aa21.34■■□□□ 1.01
PDLIM3-201ENST00000284767 ADGRA1Q86SQ6 560 aa21.34■■□□□ 1.01
PDLIM3-201ENST00000284767 FAM84BQ96KN1 310 aaPredicted RBP21.34■■□□□ 1.01
PDLIM3-201ENST00000284767 TFCP2L1Q9NZI6 479 aa21.34■■□□□ 1.01
PDLIM3-201ENST00000284767 TNRC6CQ9HCJ0 1690 aaKnown RBP21.34■■□□□ 1.01
PDLIM3-201ENST00000284767 BRWD3Q6RI45 1802 aa21.34■■□□□ 1.01
PDLIM3-201ENST00000284767 RGL2O15211 777 aa21.34■■□□□ 1.01
PDLIM3-201ENST00000284767 MB21D2Q8IYB1 491 aaPredicted RBP21.34■■□□□ 1.01
PDLIM3-201ENST00000284767 LCORLQ8N3X6 602 aa21.34■■□□□ 1.01
PDLIM3-201ENST00000284767 DOCK2Q92608 1830 aa21.33■■□□□ 1.01
PDLIM3-201ENST00000284767 ZNF804BA4D1E1 1349 aa21.33■■□□□ 1.01
PDLIM3-201ENST00000284767 CTDNEP1O95476 244 aa21.33■■□□□ 1.01
PDLIM3-201ENST00000284767 CDC25BP30305 580 aa21.33■■□□□ 1.01
PDLIM3-201ENST00000284767 UBE4AQ14139 1066 aa21.33■■□□□ 1.01
PDLIM3-201ENST00000284767 PRC1O43663 620 aa21.33■■□□□ 1
PDLIM3-201ENST00000284767 PFKFB2O60825 505 aa21.33■■□□□ 1
PDLIM3-201ENST00000284767 VPS37DQ86XT2 251 aa21.33■■□□□ 1
PDLIM3-201ENST00000284767 FEZ1Q99689 392 aa21.33■■□□□ 1
PDLIM3-201ENST00000284767 ZNF165P49910 485 aa21.32■■□□□ 1
PDLIM3-201ENST00000284767 TFIP11Q9UBB9 837 aaKnown RBP21.32■■□□□ 1
PDLIM3-201ENST00000284767 PAXBP1Q9Y5B6 917 aa21.32■■□□□ 1
PDLIM3-201ENST00000284767 PDIA3P30101 505 aaKnown RBP21.32■■□□□ 1
PDLIM3-201ENST00000284767 TXNRD3Q86VQ6 643 aa21.32■■□□□ 1
PDLIM3-201ENST00000284767 STK11IPQ8N1F8 1099 aa21.32■■□□□ 1
PDLIM3-201ENST00000284767 JAG2Q9Y219 1238 aa21.32■■□□□ 1
PDLIM3-201ENST00000284767 NCOA7Q8NI08 942 aa21.31■■□□□ 1
PDLIM3-201ENST00000284767 BICD2Q8TD16 824 aa21.31■■□□□ 1
PDLIM3-201ENST00000284767 NR1I2O75469 434 aa21.31■■□□□ 1
PDLIM3-201ENST00000284767 LRMPQ12912 555 aa21.31■■□□□ 1
PDLIM3-201ENST00000284767 RALYLQ86SE5 291 aaKnown RBP21.31■■□□□ 1
PDLIM3-201ENST00000284767 IFNL3Q8IZI9 196 aa21.31■■□□□ 1
PDLIM3-201ENST00000284767 NSUN7Q8NE18 718 aaKnown RBP21.31■■□□□ 1
PDLIM3-201ENST00000284767 CTDSPL2Q05D32 466 aa21.3■■□□□ 1
PDLIM3-201ENST00000284767 CAVIN4Q5BKX8 364 aa21.3■■□□□ 1
PDLIM3-201ENST00000284767 CNBD1Q8NA66 436 aa21.3■■□□□ 1
PDLIM3-201ENST00000284767 PGBD1Q96JS3 809 aa21.3■■□□□ 1
PDLIM3-201ENST00000284767 RAI14Q9P0K7 980 aa21.3■■□□□ 1
PDLIM3-201ENST00000284767 TACC3Q9Y6A5 838 aa21.3■■□□□ 1
PDLIM3-201ENST00000284767 CARMIL3Q8ND23 1372 aa21.3■■□□□ 1
PDLIM3-201ENST00000284767 GYS1P13807 737 aa21.3■■□□□ 1
PDLIM3-201ENST00000284767 CYB5R4Q7L1T6 521 aa21.3■■□□□ 1
PDLIM3-201ENST00000284767 PROM2Q8N271 834 aa21.3■■□□□ 1
PDLIM3-201ENST00000284767 NRBP1Q9UHY1 535 aa21.3■■□□□ 1
PDLIM3-201ENST00000284767 NEDD4P46934 1319 aa21.29■■□□□ 1
PDLIM3-201ENST00000284767 GSG1L2A8MUP6 293 aa21.29■■□□□ 1
PDLIM3-201ENST00000284767 NCBP1Q09161 790 aaKnown RBP21.29■■□□□ 1
PDLIM3-201ENST00000284767 RESTQ13127 1097 aa21.29■■□□□ 1
PDLIM3-201ENST00000284767 C16orf45Q96MC5 204 aaPredicted RBP21.29■■□□□ 1
PDLIM3-201ENST00000284767 ZSCAN16Q9H4T2 348 aaPredicted RBP21.29■■□□□ 1
PDLIM3-201ENST00000284767 CLIP2Q9UDT6 1046 aa21.29■■□□□ 1
PDLIM3-201ENST00000284767 GOLGB1Q14789 3259 aaKnown RBP21.29■■□□□ 1
PDLIM3-201ENST00000284767 PTPDC1A2A3K4 754 aa21.29■■□□□ 1
PDLIM3-201ENST00000284767 B4E1Z4 1266 aa21.29■■□□□ 1
PDLIM3-201ENST00000284767 PATL2C9JE40 543 aaKnown RBP21.29■■□□□ 1
PDLIM3-201ENST00000284767 TNNT1P13805 278 aa21.29■■□□□ 1
PDLIM3-201ENST00000284767 CYP7A1P22680 504 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms