RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 VPS37CA5D8V6 355 aaPredicted RBP12.99□□□□□ -0.33
GGPS1-201ENST00000282841 CYP2D6P10635 497 aa12.99□□□□□ -0.33
GGPS1-201ENST00000282841 SYT1P21579 422 aa12.99□□□□□ -0.33
GGPS1-201ENST00000282841 GTF2IP78347 998 aa12.99□□□□□ -0.33
GGPS1-201ENST00000282841 RALYLQ86SE5 291 aaKnown RBP12.99□□□□□ -0.33
GGPS1-201ENST00000282841 CRAMP1Q96RY5 1269 aa12.99□□□□□ -0.33
GGPS1-201ENST00000282841 MYL10Q9BUA6 226 aa12.99□□□□□ -0.33
GGPS1-201ENST00000282841 CWC22Q9HCG8 908 aaKnown RBP12.99□□□□□ -0.33
GGPS1-201ENST00000282841 KLRG2A4D1S0 409 aaPredicted RBP12.98□□□□□ -0.33
GGPS1-201ENST00000282841 SCRN1Q12765 414 aa12.98□□□□□ -0.33
GGPS1-201ENST00000282841 FAM173BQ6P4H8 233 aa12.98□□□□□ -0.33
GGPS1-201ENST00000282841 ZNF804AQ7Z570 1209 aa12.98□□□□□ -0.33
GGPS1-201ENST00000282841 DBNDD1Q9H9R9 158 aa12.98□□□□□ -0.33
GGPS1-201ENST00000282841 BRPF3Q9ULD4 1205 aa12.98□□□□□ -0.33
GGPS1-201ENST00000282841 LAMA4Q16363 1823 aa12.98□□□□□ -0.33
GGPS1-201ENST00000282841 NPR1P16066 1061 aa12.98□□□□□ -0.33
GGPS1-201ENST00000282841 PDE6BP35913 854 aa12.98□□□□□ -0.33
GGPS1-201ENST00000282841 DPP8Q6V1X1 898 aaPredicted RBP12.98□□□□□ -0.33
GGPS1-201ENST00000282841 MPNDQ8N594 471 aa12.98□□□□□ -0.33
GGPS1-201ENST00000282841 TDRD7Q8NHU6 1098 aaKnown RBP12.98□□□□□ -0.33
GGPS1-201ENST00000282841 ATP6V0A2Q9Y487 856 aa12.98□□□□□ -0.33
GGPS1-201ENST00000282841 LDHBP07195 334 aaKnown RBP12.97□□□□□ -0.33
GGPS1-201ENST00000282841 NUCB2P80303 420 aa12.97□□□□□ -0.33
GGPS1-201ENST00000282841 INTS4Q96HW7 963 aaKnown RBP12.97□□□□□ -0.33
GGPS1-201ENST00000282841 H0YIN7 160 aa12.97□□□□□ -0.33
GGPS1-201ENST00000282841 MFSD14BQ5SR56 506 aa12.97□□□□□ -0.33
GGPS1-201ENST00000282841 MB21D2Q8IYB1 491 aaPredicted RBP12.97□□□□□ -0.33
GGPS1-201ENST00000282841 NCOA7Q8NI08 942 aa12.97□□□□□ -0.33
GGPS1-201ENST00000282841 MASTLQ96GX5 879 aa12.97□□□□□ -0.33
GGPS1-201ENST00000282841 CACNA1SQ13698 1873 aa12.96□□□□□ -0.33
GGPS1-201ENST00000282841 ATP2B4P23634 1241 aa12.96□□□□□ -0.33
GGPS1-201ENST00000282841 NAP1L5Q96NT1 182 aaPredicted RBP12.96□□□□□ -0.33
GGPS1-201ENST00000282841 USP17L12C9JPN9 530 aa12.96□□□□□ -0.34
GGPS1-201ENST00000282841 USP17L21D6R901 530 aa12.96□□□□□ -0.34
GGPS1-201ENST00000282841 PRPF40AO75400 957 aaKnown RBP12.96□□□□□ -0.34
GGPS1-201ENST00000282841 TRDNQ13061 729 aa12.96□□□□□ -0.34
GGPS1-201ENST00000282841 SP8Q8IXZ3 490 aa12.96□□□□□ -0.34
GGPS1-201ENST00000282841 ZSCAN31Q96LW9 406 aaPredicted RBP12.96□□□□□ -0.34
GGPS1-201ENST00000282841 ZC3H12CQ9C0D7 883 aaKnown RBP12.96□□□□□ -0.34
GGPS1-201ENST00000282841 ZSWIM5Q9P217 1185 aa12.96□□□□□ -0.34
GGPS1-201ENST00000282841 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.96□□□□□ -0.34
GGPS1-201ENST00000282841 BAZ2AQ9UIF9 1905 aaKnown RBP12.96□□□□□ -0.34
GGPS1-201ENST00000282841 KLF18A0A0U1RQI7 1052 aa12.95□□□□□ -0.34
GGPS1-201ENST00000282841 C21orf2O43822 256 aa12.95□□□□□ -0.34
GGPS1-201ENST00000282841 NCLP19338 710 aaKnown RBP12.95□□□□□ -0.34
GGPS1-201ENST00000282841 SCNN1DP51172 638 aa12.95□□□□□ -0.34
GGPS1-201ENST00000282841 GUCY1B3Q02153 619 aa12.95□□□□□ -0.34
GGPS1-201ENST00000282841 SH3RF3Q8TEJ3 882 aaPredicted RBP12.95□□□□□ -0.34
GGPS1-201ENST00000282841 SH2B1Q9NRF2 756 aaPredicted RBP12.95□□□□□ -0.34
GGPS1-201ENST00000282841 GJB4Q9NTQ9 266 aa12.95□□□□□ -0.34
GGPS1-201ENST00000282841 G3V3G9 751 aa12.95□□□□□ -0.34
GGPS1-201ENST00000282841 TRAK2O60296 914 aa12.95□□□□□ -0.34
GGPS1-201ENST00000282841 BRD1O95696 1058 aa12.95□□□□□ -0.34
GGPS1-201ENST00000282841 USP17L8P0C7I0 530 aa12.95□□□□□ -0.34
GGPS1-201ENST00000282841 PDIA3P30101 505 aaKnown RBP12.95□□□□□ -0.34
GGPS1-201ENST00000282841 MCM5P33992 734 aa12.95□□□□□ -0.34
GGPS1-201ENST00000282841 ANKRD1Q15327 319 aa12.95□□□□□ -0.34
GGPS1-201ENST00000282841 DCAF8Q5TAQ9 597 aa12.95□□□□□ -0.34
GGPS1-201ENST00000282841 GTF3C6Q969F1 213 aa12.95□□□□□ -0.34
GGPS1-201ENST00000282841 GBP4Q96PP9 640 aa12.95□□□□□ -0.34
GGPS1-201ENST00000282841 SAP30BPQ9UHR5 308 aaKnown RBP12.95□□□□□ -0.34
GGPS1-201ENST00000282841 DOCK2Q92608 1830 aa12.95□□□□□ -0.34
GGPS1-201ENST00000282841 STX6O43752 255 aa12.95□□□□□ -0.34
GGPS1-201ENST00000282841 CTDNEP1O95476 244 aa12.95□□□□□ -0.34
GGPS1-201ENST00000282841 LARP1BQ659C4 914 aaKnown RBP12.95□□□□□ -0.34
GGPS1-201ENST00000282841 NACAP1Q9BZK3 213 aa12.95□□□□□ -0.34
GGPS1-201ENST00000282841 PCDHAC2Q9Y5I4 1007 aa12.95□□□□□ -0.34
GGPS1-201ENST00000282841 CHD4Q14839 1912 aa12.94□□□□□ -0.34
GGPS1-201ENST00000282841 COL11A2P13942 1736 aaPredicted RBP12.94□□□□□ -0.34
GGPS1-201ENST00000282841 PSDA5PKW4 1024 aaPredicted RBP12.94□□□□□ -0.34
GGPS1-201ENST00000282841 UBE2Q2LH0YL09 131 aa12.94□□□□□ -0.34
GGPS1-201ENST00000282841 HMGB1P09429 215 aaKnown RBP12.94□□□□□ -0.34
GGPS1-201ENST00000282841 ALDH1B1P30837 517 aa12.94□□□□□ -0.34
GGPS1-201ENST00000282841 PPARAQ07869 468 aa12.94□□□□□ -0.34
GGPS1-201ENST00000282841 MFSD6Q6ZSS7 791 aa12.94□□□□□ -0.34
GGPS1-201ENST00000282841 CDC37L1Q7L3B6 337 aa12.94□□□□□ -0.34
GGPS1-201ENST00000282841 CMTR1Q8N1G2 835 aaKnown RBP12.94□□□□□ -0.34
GGPS1-201ENST00000282841 CCDC82Q8N4S0 544 aa12.94□□□□□ -0.34
GGPS1-201ENST00000282841 GOLGA8BA8MQT2 603 aa12.94□□□□□ -0.34
GGPS1-201ENST00000282841 SEMA3EO15041 775 aa12.94□□□□□ -0.34
GGPS1-201ENST00000282841 OTUD7BQ6GQQ9 843 aa12.94□□□□□ -0.34
GGPS1-201ENST00000282841 MICU3Q86XE3 530 aa12.94□□□□□ -0.34
GGPS1-201ENST00000282841 MAPKAPK5Q8IW41 473 aa12.94□□□□□ -0.34
GGPS1-201ENST00000282841 NMT2O60551 498 aa12.93□□□□□ -0.34
GGPS1-201ENST00000282841 SLURP2P0DP57 97 aa12.93□□□□□ -0.34
GGPS1-201ENST00000282841 AKNAD1Q5T1N1 836 aa12.93□□□□□ -0.34
GGPS1-201ENST00000282841 CTR9Q6PD62 1173 aa12.93□□□□□ -0.34
GGPS1-201ENST00000282841 CERS5Q8N5B7 392 aa12.93□□□□□ -0.34
GGPS1-201ENST00000282841 WDR66Q8TBY9 1149 aa12.93□□□□□ -0.34
GGPS1-201ENST00000282841 TGFBRAP1Q8WUH2 860 aa12.93□□□□□ -0.34
GGPS1-201ENST00000282841 DYNLL2Q96FJ2 89 aa12.93□□□□□ -0.34
GGPS1-201ENST00000282841 MCM9Q9NXL9 1143 aa12.93□□□□□ -0.34
GGPS1-201ENST00000282841 RANBP6O60518 1105 aaKnown RBP12.93□□□□□ -0.34
GGPS1-201ENST00000282841 R3HDM1Q15032 1099 aaKnown RBP12.93□□□□□ -0.34
GGPS1-201ENST00000282841 FAM47AQ5JRC9 791 aa12.93□□□□□ -0.34
GGPS1-201ENST00000282841 NFXL1Q6ZNB6 911 aa12.93□□□□□ -0.34
GGPS1-201ENST00000282841 SLX4Q8IY92 1834 aa12.93□□□□□ -0.34
GGPS1-201ENST00000282841 BRD2P25440 801 aaKnown RBP12.92□□□□□ -0.34
GGPS1-201ENST00000282841 ADD1P35611 737 aaKnown RBP12.92□□□□□ -0.34
GGPS1-201ENST00000282841 AOC3Q16853 763 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms