RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 AGXT2Q9BYV1 514 aa24.78■■□□□ 1.56
YBX3-202ENST00000279550 NBPF3Q9H094 633 aa24.78■■□□□ 1.56
YBX3-202ENST00000279550 FSD2A1L4K1 749 aa24.77■■□□□ 1.56
YBX3-202ENST00000279550 CCDC93Q567U6 631 aa24.77■■□□□ 1.56
YBX3-202ENST00000279550 CHST3Q7LGC8 479 aa24.77■■□□□ 1.56
YBX3-202ENST00000279550 COA1Q9GZY4 146 aa24.77■■□□□ 1.56
YBX3-202ENST00000279550 F13A1P00488 732 aa24.76■■□□□ 1.55
YBX3-202ENST00000279550 APOBRQ0VD83 1088 aa24.76■■□□□ 1.55
YBX3-202ENST00000279550 GPT2Q8TD30 523 aa24.76■■□□□ 1.55
YBX3-202ENST00000279550 RTKN2Q8IZC4 609 aa24.75■■□□□ 1.55
YBX3-202ENST00000279550 WDR66Q8TBY9 1149 aa24.75■■□□□ 1.55
YBX3-202ENST00000279550 JAG2Q9Y219 1238 aa24.75■■□□□ 1.55
YBX3-202ENST00000279550 MBD4O95243 580 aa24.75■■□□□ 1.55
YBX3-202ENST00000279550 FGD1P98174 961 aa24.75■■□□□ 1.55
YBX3-202ENST00000279550 DALRD3Q5D0E6 543 aaKnown RBP24.75■■□□□ 1.55
YBX3-202ENST00000279550 MB21D2Q8IYB1 491 aaPredicted RBP24.75■■□□□ 1.55
YBX3-202ENST00000279550 GPHNQ9NQX3 736 aaPredicted RBP24.75■■□□□ 1.55
YBX3-202ENST00000279550 SALL1Q9NSC2 1324 aa24.74■■□□□ 1.55
YBX3-202ENST00000279550 JAK2O60674 1132 aa24.74■■□□□ 1.55
YBX3-202ENST00000279550 PFKFB2O60825 505 aa24.74■■□□□ 1.55
YBX3-202ENST00000279550 SOGA3Q5TF21 947 aa24.74■■□□□ 1.55
YBX3-202ENST00000279550 SUPT20HQ8NEM7 779 aa24.74■■□□□ 1.55
YBX3-202ENST00000279550 AIDAQ96BJ3 306 aa24.74■■□□□ 1.55
YBX3-202ENST00000279550 ARMT1Q9H993 441 aa24.74■■□□□ 1.55
YBX3-202ENST00000279550 RAI14Q9P0K7 980 aa24.74■■□□□ 1.55
YBX3-202ENST00000279550 BRCA1P38398 1863 aaKnown RBP24.74■■□□□ 1.55
YBX3-202ENST00000279550 TBC1D10CQ8IV04 446 aa24.73■■□□□ 1.55
YBX3-202ENST00000279550 GDPD2Q9HCC8 539 aa24.73■■□□□ 1.55
YBX3-202ENST00000279550 VPS37CA5D8V6 355 aaPredicted RBP24.72■■□□□ 1.55
YBX3-202ENST00000279550 ZNF213O14771 459 aa24.72■■□□□ 1.55
YBX3-202ENST00000279550 NCLP19338 710 aaKnown RBP24.72■■□□□ 1.55
YBX3-202ENST00000279550 ANTXR2P58335 489 aa24.72■■□□□ 1.55
YBX3-202ENST00000279550 SCRN1Q12765 414 aa24.72■■□□□ 1.55
YBX3-202ENST00000279550 NKX2-3Q8TAU0 364 aa24.72■■□□□ 1.55
YBX3-202ENST00000279550 EPB41L4AQ9HCS5 686 aaPredicted RBP24.72■■□□□ 1.55
YBX3-202ENST00000279550 APPP05067 770 aa24.72■■□□□ 1.55
YBX3-202ENST00000279550 PRDX5P30044 214 aa24.72■■□□□ 1.55
YBX3-202ENST00000279550 DOK7Q18PE1 504 aa24.72■■□□□ 1.55
YBX3-202ENST00000279550 LARP1BQ659C4 914 aaKnown RBP24.72■■□□□ 1.55
YBX3-202ENST00000279550 PSMD1Q99460 953 aa24.72■■□□□ 1.55
YBX3-202ENST00000279550 GOLGA6L3A6NEY3 463 aa24.71■■□□□ 1.55
YBX3-202ENST00000279550 G3V3G9 751 aa24.71■■□□□ 1.55
YBX3-202ENST00000279550 ALX1Q15699 326 aa24.71■■□□□ 1.55
YBX3-202ENST00000279550 DCAF8Q5TAQ9 597 aa24.71■■□□□ 1.55
YBX3-202ENST00000279550 CNPY2Q9Y2B0 182 aa24.71■■□□□ 1.55
YBX3-202ENST00000279550 PRC1O43663 620 aa24.7■■□□□ 1.54
YBX3-202ENST00000279550 KIAA2012Q0VF49 1180 aa24.7■■□□□ 1.54
YBX3-202ENST00000279550 SPTY2D1Q68D10 685 aaPredicted RBP24.7■■□□□ 1.54
YBX3-202ENST00000279550 LCORLQ8N3X6 602 aa24.7■■□□□ 1.54
YBX3-202ENST00000279550 NLGN2Q8NFZ4 835 aa24.7■■□□□ 1.54
YBX3-202ENST00000279550 RBM27Q9P2N5 1060 aaKnown RBP24.7■■□□□ 1.54
YBX3-202ENST00000279550 AOC3Q16853 763 aa24.69■■□□□ 1.54
YBX3-202ENST00000279550 CAVIN1Q6NZI2 390 aaKnown RBP24.69■■□□□ 1.54
YBX3-202ENST00000279550 CDC37L1Q7L3B6 337 aa24.69■■□□□ 1.54
YBX3-202ENST00000279550 USP48Q86UV5 1035 aa24.69■■□□□ 1.54
YBX3-202ENST00000279550 GAS2L3Q86XJ1 694 aa24.69■■□□□ 1.54
YBX3-202ENST00000279550 FAM205AQ6ZU69 1335 aa24.69■■□□□ 1.54
YBX3-202ENST00000279550 PATL2C9JE40 543 aaKnown RBP24.69■■□□□ 1.54
YBX3-202ENST00000279550 PRKAB2O43741 272 aa24.69■■□□□ 1.54
YBX3-202ENST00000279550 CTDNEP1O95476 244 aa24.69■■□□□ 1.54
YBX3-202ENST00000279550 MECOMQ03112 1051 aa24.69■■□□□ 1.54
YBX3-202ENST00000279550 PODNQ7Z5L7 613 aa24.69■■□□□ 1.54
YBX3-202ENST00000279550 ADGRA1Q86SQ6 560 aa24.69■■□□□ 1.54
YBX3-202ENST00000279550 FBXL16Q8N461 479 aa24.69■■□□□ 1.54
YBX3-202ENST00000279550 NCOA7Q8NI08 942 aa24.69■■□□□ 1.54
YBX3-202ENST00000279550 ZNF384Q8TF68 577 aa24.69■■□□□ 1.54
YBX3-202ENST00000279550 NSUN4Q96CB9 384 aaKnown RBP24.69■■□□□ 1.54
YBX3-202ENST00000279550 DBNDD1Q9H9R9 158 aa24.69■■□□□ 1.54
YBX3-202ENST00000279550 TCHHQ07283 1943 aa24.68■■□□□ 1.54
YBX3-202ENST00000279550 GSG1L2A8MUP6 293 aa24.68■■□□□ 1.54
YBX3-202ENST00000279550 IGSF3O75054 1194 aa24.68■■□□□ 1.54
YBX3-202ENST00000279550 GADD45BO75293 160 aaPredicted RBP24.68■■□□□ 1.54
YBX3-202ENST00000279550 LDHBP07195 334 aaKnown RBP24.68■■□□□ 1.54
YBX3-202ENST00000279550 CYP7A1P22680 504 aa24.68■■□□□ 1.54
YBX3-202ENST00000279550 PDIA3P30101 505 aaKnown RBP24.68■■□□□ 1.54
YBX3-202ENST00000279550 GTF2IP78347 998 aa24.68■■□□□ 1.54
YBX3-202ENST00000279550 NAA16Q6N069 864 aaPredicted RBP24.68■■□□□ 1.54
YBX3-202ENST00000279550 IFNL3Q8IZI9 196 aa24.68■■□□□ 1.54
YBX3-202ENST00000279550 MIGA1Q8NAN2 632 aa24.68■■□□□ 1.54
YBX3-202ENST00000279550 SMARCC2Q8TAQ2 1214 aa24.68■■□□□ 1.54
YBX3-202ENST00000279550 TBC1D22AQ8WUA7 517 aa24.68■■□□□ 1.54
YBX3-202ENST00000279550 ZMYM6O95789 1325 aa24.67■■□□□ 1.54
YBX3-202ENST00000279550 MCM5P33992 734 aa24.67■■□□□ 1.54
YBX3-202ENST00000279550 CCT2P78371 535 aaKnown RBP24.67■■□□□ 1.54
YBX3-202ENST00000279550 MFSD14BQ5SR56 506 aa24.67■■□□□ 1.54
YBX3-202ENST00000279550 TMEM87AQ8NBN3 555 aa24.67■■□□□ 1.54
YBX3-202ENST00000279550 NSUN7Q8NE18 718 aaKnown RBP24.67■■□□□ 1.54
YBX3-202ENST00000279550 NCOA5Q9HCD5 579 aaKnown RBP24.67■■□□□ 1.54
YBX3-202ENST00000279550 PPIP5K2O43314 1243 aa24.66■■□□□ 1.54
YBX3-202ENST00000279550 PDCP20941 246 aa24.66■■□□□ 1.54
YBX3-202ENST00000279550 EVCP57679 992 aa24.66■■□□□ 1.54
YBX3-202ENST00000279550 L1TD1Q5T7N2 865 aaKnown RBP24.66■■□□□ 1.54
YBX3-202ENST00000279550 TMED8Q6PL24 325 aaPredicted RBP24.66■■□□□ 1.54
YBX3-202ENST00000279550 RALYLQ86SE5 291 aaKnown RBP24.66■■□□□ 1.54
YBX3-202ENST00000279550 DZIP1Q86YF9 867 aaKnown RBP24.66■■□□□ 1.54
YBX3-202ENST00000279550 DDX11Q96FC9 970 aa24.66■■□□□ 1.54
YBX3-202ENST00000279550 ZNF274Q96GC6 653 aaPredicted RBP24.66■■□□□ 1.54
YBX3-202ENST00000279550 BCS1LQ9Y276 419 aa24.66■■□□□ 1.54
YBX3-202ENST00000279550 TACC3Q9Y6A5 838 aa24.66■■□□□ 1.54
YBX3-202ENST00000279550 CHD4Q14839 1912 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms