RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 CCDC144CPQ8IYA2 1237 aa15.81■□□□□ 0.12
ACER3-201ENST00000278544 RASSF7Q02833 373 aa15.8■□□□□ 0.12
ACER3-201ENST00000278544 C7orf43Q8WVR3 580 aa15.8■□□□□ 0.12
ACER3-201ENST00000278544 PTGER2P43116 358 aa15.8■□□□□ 0.12
ACER3-201ENST00000278544 ANAPC15P60006 121 aa15.8■□□□□ 0.12
ACER3-201ENST00000278544 APOBRQ0VD83 1088 aa15.8■□□□□ 0.12
ACER3-201ENST00000278544 RALYLQ86SE5 291 aaKnown RBP15.8■□□□□ 0.12
ACER3-201ENST00000278544 EYA3Q99504 573 aa15.8■□□□□ 0.12
ACER3-201ENST00000278544 MCM9Q9NXL9 1143 aa15.8■□□□□ 0.12
ACER3-201ENST00000278544 PATL2C9JE40 543 aaKnown RBP15.8■□□□□ 0.12
ACER3-201ENST00000278544 BTDP43251 543 aa15.8■□□□□ 0.12
ACER3-201ENST00000278544 RIOK1Q9BRS2 568 aaKnown RBP15.8■□□□□ 0.12
ACER3-201ENST00000278544 CHD4Q14839 1912 aa15.79■□□□□ 0.12
ACER3-201ENST00000278544 TCP10Q12799 353 aa15.79■□□□□ 0.12
ACER3-201ENST00000278544 COA1Q9GZY4 146 aa15.79■□□□□ 0.12
ACER3-201ENST00000278544 RBM26Q5T8P6 1007 aaKnown RBP15.79■□□□□ 0.12
ACER3-201ENST00000278544 NBPF3Q9H094 633 aa15.79■□□□□ 0.12
ACER3-201ENST00000278544 TPCN1Q9ULQ1 816 aa15.79■□□□□ 0.12
ACER3-201ENST00000278544 TACC3Q9Y6A5 838 aa15.79■□□□□ 0.12
ACER3-201ENST00000278544 IL1R1P14778 569 aa15.78■□□□□ 0.12
ACER3-201ENST00000278544 CCDC93Q567U6 631 aa15.78■□□□□ 0.12
ACER3-201ENST00000278544 MYL10Q9BUA6 226 aa15.78■□□□□ 0.12
ACER3-201ENST00000278544 NCOA5Q9HCD5 579 aaKnown RBP15.78■□□□□ 0.12
ACER3-201ENST00000278544 ZSWIM6Q9HCJ5 1215 aa15.78■□□□□ 0.12
ACER3-201ENST00000278544 YDJCA8MPS7 323 aa15.78■□□□□ 0.12
ACER3-201ENST00000278544 RPS6KB1P23443 525 aa15.78■□□□□ 0.12
ACER3-201ENST00000278544 PSMA5P28066 241 aa15.78■□□□□ 0.12
ACER3-201ENST00000278544 TMC4Q7Z404 712 aa15.78■□□□□ 0.12
ACER3-201ENST00000278544 SNX21Q969T3 373 aa15.78■□□□□ 0.12
ACER3-201ENST00000278544 DYNLL2Q96FJ2 89 aa15.78■□□□□ 0.12
ACER3-201ENST00000278544 NACAP1Q9BZK3 213 aa15.78■□□□□ 0.12
ACER3-201ENST00000278544 FHDC1Q9C0D6 1143 aaPredicted RBP15.78■□□□□ 0.12
ACER3-201ENST00000278544 SENP2Q9HC62 589 aa15.78■□□□□ 0.12
ACER3-201ENST00000278544 SEMA3EO15041 775 aa15.78■□□□□ 0.12
ACER3-201ENST00000278544 SLC44A5Q8NCS7 719 aa15.78■□□□□ 0.12
ACER3-201ENST00000278544 NOL10Q9BSC4 688 aaKnown RBP15.78■□□□□ 0.12
ACER3-201ENST00000278544 NEDD4P46934 1319 aa15.78■□□□□ 0.12
ACER3-201ENST00000278544 ME3Q16798 604 aa15.77■□□□□ 0.12
ACER3-201ENST00000278544 SPTY2D1Q68D10 685 aaPredicted RBP15.77■□□□□ 0.12
ACER3-201ENST00000278544 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.77■□□□□ 0.12
ACER3-201ENST00000278544 CTNNA3Q9UI47 895 aa15.77■□□□□ 0.12
ACER3-201ENST00000278544 RANBP6O60518 1105 aaKnown RBP15.77■□□□□ 0.12
ACER3-201ENST00000278544 TRDNQ13061 729 aa15.77■□□□□ 0.12
ACER3-201ENST00000278544 DDX11Q96FC9 970 aa15.77■□□□□ 0.12
ACER3-201ENST00000278544 FAM47AQ5JRC9 791 aa15.77■□□□□ 0.11
ACER3-201ENST00000278544 CCDC82Q8N4S0 544 aa15.77■□□□□ 0.11
ACER3-201ENST00000278544 TTC14Q96N46 770 aa15.77■□□□□ 0.11
ACER3-201ENST00000278544 SHTN1A0MZ66 631 aa15.76■□□□□ 0.11
ACER3-201ENST00000278544 TEX11Q8IYF3 940 aa15.76■□□□□ 0.11
ACER3-201ENST00000278544 SPON1Q9HCB6 807 aa15.76■□□□□ 0.11
ACER3-201ENST00000278544 C10orf71Q711Q0 1435 aa15.76■□□□□ 0.11
ACER3-201ENST00000278544 RFX7Q2KHR2 1363 aa15.76■□□□□ 0.11
ACER3-201ENST00000278544 PRC1O43663 620 aa15.76■□□□□ 0.11
ACER3-201ENST00000278544 TOB2Q14106 344 aaPredicted RBP15.76■□□□□ 0.11
ACER3-201ENST00000278544 CYB5R4Q7L1T6 521 aa15.76■□□□□ 0.11
ACER3-201ENST00000278544 CRNKL1Q9BZJ0 848 aaKnown RBP15.76■□□□□ 0.11
ACER3-201ENST00000278544 GJA3Q9Y6H8 435 aa15.76■□□□□ 0.11
ACER3-201ENST00000278544 ARHGAP27Q6ZUM4 889 aa15.75■□□□□ 0.11
ACER3-201ENST00000278544 DCP1AQ9NPI6 582 aaPredicted RBP15.75■□□□□ 0.11
ACER3-201ENST00000278544 LIMCH1Q9UPQ0 1083 aa15.75■□□□□ 0.11
ACER3-201ENST00000278544 FAM196BA6NMK8 535 aa15.75■□□□□ 0.11
ACER3-201ENST00000278544 DAGLAQ9Y4D2 1042 aa15.75■□□□□ 0.11
ACER3-201ENST00000278544 CLRN2A0PK11 232 aa15.74■□□□□ 0.11
ACER3-201ENST00000278544 PPARAQ07869 468 aa15.74■□□□□ 0.11
ACER3-201ENST00000278544 MFSD6Q6ZSS7 791 aa15.74■□□□□ 0.11
ACER3-201ENST00000278544 A0A1B0GUL6 1792 aa15.74■□□□□ 0.11
ACER3-201ENST00000278544 NMT2O60551 498 aa15.74■□□□□ 0.11
ACER3-201ENST00000278544 POLR3DP05423 398 aaPredicted RBP15.74■□□□□ 0.11
ACER3-201ENST00000278544 KIAA2012Q0VF49 1180 aa15.74■□□□□ 0.11
ACER3-201ENST00000278544 SGIP1Q9BQI5 828 aa15.74■□□□□ 0.11
ACER3-201ENST00000278544 PSMD14O00487 310 aa15.74■□□□□ 0.11
ACER3-201ENST00000278544 DHX32Q7L7V1 743 aaKnown RBP15.74■□□□□ 0.11
ACER3-201ENST00000278544 DUOX1Q9NRD9 1551 aa15.74■□□□□ 0.11
ACER3-201ENST00000278544 BAZ2AQ9UIF9 1905 aaKnown RBP15.73■□□□□ 0.11
ACER3-201ENST00000278544 RGPD3A6NKT7 1758 aaPredicted RBP15.73■□□□□ 0.11
ACER3-201ENST00000278544 RGPD4Q7Z3J3 1758 aa15.73■□□□□ 0.11
ACER3-201ENST00000278544 PLCD1P51178 756 aa15.73■□□□□ 0.11
ACER3-201ENST00000278544 CTR9Q6PD62 1173 aa15.73■□□□□ 0.11
ACER3-201ENST00000278544 NFXL1Q6ZNB6 911 aa15.73■□□□□ 0.11
ACER3-201ENST00000278544 NCOA7Q8NI08 942 aa15.73■□□□□ 0.11
ACER3-201ENST00000278544 USP17L3A6NCW0 530 aa15.73■□□□□ 0.11
ACER3-201ENST00000278544 USP17L4A6NCW7 530 aa15.73■□□□□ 0.11
ACER3-201ENST00000278544 BAG3O95817 575 aa15.73■□□□□ 0.11
ACER3-201ENST00000278544 NFIAQ12857 509 aa15.73■□□□□ 0.11
ACER3-201ENST00000278544 KRT32Q14532 448 aa15.73■□□□□ 0.11
ACER3-201ENST00000278544 USP17L1Q7RTZ2 530 aa15.73■□□□□ 0.11
ACER3-201ENST00000278544 PODNQ7Z5L7 613 aa15.73■□□□□ 0.11
ACER3-201ENST00000278544 ZSCAN29Q8IWY8 852 aaPredicted RBP15.73■□□□□ 0.11
ACER3-201ENST00000278544 RTFDC1Q9BY42 306 aaPredicted RBP15.73■□□□□ 0.11
ACER3-201ENST00000278544 TAOK3Q9H2K8 898 aa15.73■□□□□ 0.11
ACER3-201ENST00000278544 USP40Q9NVE5 1235 aa15.73■□□□□ 0.11
ACER3-201ENST00000278544 ZSWIM5Q9P217 1185 aa15.73■□□□□ 0.11
ACER3-201ENST00000278544 MROH7-TTC4A0A0A0MT08 1334 aa15.73■□□□□ 0.11
ACER3-201ENST00000278544 MYH7P12883 1935 aa15.73■□□□□ 0.11
ACER3-201ENST00000278544 ANTXR2P58335 489 aa15.73■□□□□ 0.11
ACER3-201ENST00000278544 CMTR1Q8N1G2 835 aaKnown RBP15.73■□□□□ 0.11
ACER3-201ENST00000278544 NRXN2Q9P2S2 1712 aa15.73■□□□□ 0.11
ACER3-201ENST00000278544 JAK2O60674 1132 aa15.72■□□□□ 0.11
ACER3-201ENST00000278544 TGFB2P61812 414 aa15.72■□□□□ 0.11
ACER3-201ENST00000278544 MICU3Q86XE3 530 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms