RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 BRPF3Q9ULD4 1205 aa14.33□□□□□ -0.11
SDE2-201ENST00000272091 DDX11L8A8MPP1 907 aa14.33□□□□□ -0.12
SDE2-201ENST00000272091 EVX2Q03828 476 aa14.33□□□□□ -0.12
SDE2-201ENST00000272091 ADAMTSL1Q8N6G6 1762 aa14.33□□□□□ -0.12
SDE2-201ENST00000272091 ECM29Q5VYK3 1845 aa14.33□□□□□ -0.12
SDE2-201ENST00000272091 B4E1Z4 1266 aa14.33□□□□□ -0.12
SDE2-201ENST00000272091 JAK2O60674 1132 aa14.33□□□□□ -0.12
SDE2-201ENST00000272091 PDIA3P30101 505 aaKnown RBP14.33□□□□□ -0.12
SDE2-201ENST00000272091 MCM5P33992 734 aa14.33□□□□□ -0.12
SDE2-201ENST00000272091 TCHHQ07283 1943 aa14.33□□□□□ -0.12
SDE2-201ENST00000272091 C2CD5Q86YS7 1000 aa14.32□□□□□ -0.12
SDE2-201ENST00000272091 WDR66Q8TBY9 1149 aa14.32□□□□□ -0.12
SDE2-201ENST00000272091 SENP2Q9HC62 589 aa14.32□□□□□ -0.12
SDE2-201ENST00000272091 KIF13BQ9NQT8 1826 aa14.32□□□□□ -0.12
SDE2-201ENST00000272091 NAV1Q8NEY1 1877 aa14.32□□□□□ -0.12
SDE2-201ENST00000272091 BAG6P46379 1132 aa14.32□□□□□ -0.12
SDE2-201ENST00000272091 AATFQ9NY61 560 aaKnown RBP eCLIP14.32□□□□□ -0.12
SDE2-201ENST00000272091 HPS5Q9UPZ3 1129 aa14.32□□□□□ -0.12
SDE2-201ENST00000272091 STX6O43752 255 aa14.32□□□□□ -0.12
SDE2-201ENST00000272091 CHRNA5P30532 468 aa14.32□□□□□ -0.12
SDE2-201ENST00000272091 ALDH1B1P30837 517 aa14.32□□□□□ -0.12
SDE2-201ENST00000272091 TDO2P48775 406 aa14.32□□□□□ -0.12
SDE2-201ENST00000272091 STAG1Q8WVM7 1258 aa14.32□□□□□ -0.12
SDE2-201ENST00000272091 MTMR6Q9Y217 621 aa14.32□□□□□ -0.12
SDE2-201ENST00000272091 ZNF274Q96GC6 653 aaPredicted RBP14.32□□□□□ -0.12
SDE2-201ENST00000272091 C10orf71Q711Q0 1435 aa14.32□□□□□ -0.12
SDE2-201ENST00000272091 FOCADQ5VW36 1801 aa14.31□□□□□ -0.12
SDE2-201ENST00000272091 WDR33Q9C0J8 1336 aaKnown RBP14.31□□□□□ -0.12
SDE2-201ENST00000272091 CYP2D7A0A087X1C5 515 aa14.31□□□□□ -0.12
SDE2-201ENST00000272091 C6orf229H3BNL8 230 aa14.31□□□□□ -0.12
SDE2-201ENST00000272091 AKNAD1Q5T1N1 836 aa14.31□□□□□ -0.12
SDE2-201ENST00000272091 MCTP1Q6DN14 999 aa14.31□□□□□ -0.12
SDE2-201ENST00000272091 SMARCC2Q8TAQ2 1214 aa14.31□□□□□ -0.12
SDE2-201ENST00000272091 NCOA5Q9HCD5 579 aaKnown RBP14.31□□□□□ -0.12
SDE2-201ENST00000272091 ANAPC4Q9UJX5 808 aa14.31□□□□□ -0.12
SDE2-201ENST00000272091 ZSCAN22P10073 491 aaPredicted RBP14.31□□□□□ -0.12
SDE2-201ENST00000272091 PPARAQ07869 468 aa14.31□□□□□ -0.12
SDE2-201ENST00000272091 DIXDC1Q155Q3 683 aa14.31□□□□□ -0.12
SDE2-201ENST00000272091 STYK1Q6J9G0 422 aa14.31□□□□□ -0.12
SDE2-201ENST00000272091 NSUN7Q8NE18 718 aaKnown RBP14.31□□□□□ -0.12
SDE2-201ENST00000272091 SH2B2O14492 632 aaPredicted RBP14.31□□□□□ -0.12
SDE2-201ENST00000272091 TRAK2O60296 914 aa14.31□□□□□ -0.12
SDE2-201ENST00000272091 LDHBP07195 334 aaKnown RBP14.31□□□□□ -0.12
SDE2-201ENST00000272091 RALYLQ86SE5 291 aaKnown RBP14.31□□□□□ -0.12
SDE2-201ENST00000272091 NACAP1Q9BZK3 213 aa14.31□□□□□ -0.12
SDE2-201ENST00000272091 RIMBP2O15034 1052 aa14.3□□□□□ -0.12
SDE2-201ENST00000272091 SPTY2D1Q68D10 685 aaPredicted RBP14.3□□□□□ -0.12
SDE2-201ENST00000272091 MPNDQ8N594 471 aa14.3□□□□□ -0.12
SDE2-201ENST00000272091 IGDCC4Q8TDY8 1250 aa14.3□□□□□ -0.12
SDE2-201ENST00000272091 ZNF622Q969S3 477 aaKnown RBP eCLIP14.3□□□□□ -0.126e-9■■■■□ 19.4
SDE2-201ENST00000272091 LMBRD1Q9NUN5 540 aa14.3□□□□□ -0.12
SDE2-201ENST00000272091 CCT2P78371 535 aaKnown RBP14.3□□□□□ -0.12
SDE2-201ENST00000272091 FGD1P98174 961 aa14.3□□□□□ -0.12
SDE2-201ENST00000272091 CTR9Q6PD62 1173 aa14.3□□□□□ -0.12
SDE2-201ENST00000272091 ZSWIM5Q9P217 1185 aa14.3□□□□□ -0.12
SDE2-201ENST00000272091 SCN9AQ15858 1988 aa14.3□□□□□ -0.12
SDE2-201ENST00000272091 DZIP1Q86YF9 867 aaKnown RBP14.3□□□□□ -0.12
SDE2-201ENST00000272091 FAM205AQ6ZU69 1335 aa14.29□□□□□ -0.12
SDE2-201ENST00000272091 MYH15Q9Y2K3 1946 aa14.29□□□□□ -0.12
SDE2-201ENST00000272091 TMED8Q6PL24 325 aaPredicted RBP14.29□□□□□ -0.12
SDE2-201ENST00000272091 MKRN1Q9UHC7 482 aaKnown RBP14.29□□□□□ -0.12
SDE2-201ENST00000272091 RTFDC1Q9BY42 306 aaPredicted RBP14.29□□□□□ -0.12
SDE2-201ENST00000272091 DCP1AQ9NPI6 582 aaPredicted RBP14.29□□□□□ -0.12
SDE2-201ENST00000272091 F13A1P00488 732 aa14.29□□□□□ -0.12
SDE2-201ENST00000272091 STK11IPQ8N1F8 1099 aa14.29□□□□□ -0.12
SDE2-201ENST00000272091 C7orf43Q8WVR3 580 aa14.29□□□□□ -0.12
SDE2-201ENST00000272091 LY9Q9HBG7 655 aa14.29□□□□□ -0.12
SDE2-201ENST00000272091 H0YIN7 160 aa14.28□□□□□ -0.12
SDE2-201ENST00000272091 KDM4AO75164 1064 aa14.28□□□□□ -0.12
SDE2-201ENST00000272091 SF3B2Q13435 895 aaKnown RBP14.28□□□□□ -0.12
SDE2-201ENST00000272091 GIMAP6Q6P9H5 292 aa14.28□□□□□ -0.12
SDE2-201ENST00000272091 CDC37L1Q7L3B6 337 aa14.28□□□□□ -0.12
SDE2-201ENST00000272091 MROH7-TTC4A0A0A0MT08 1334 aa14.28□□□□□ -0.12
SDE2-201ENST00000272091 KLF18A0A0U1RQI7 1052 aa14.28□□□□□ -0.12
SDE2-201ENST00000272091 TRDNQ13061 729 aa14.28□□□□□ -0.12
SDE2-201ENST00000272091 DPP8Q6V1X1 898 aaPredicted RBP14.28□□□□□ -0.12
SDE2-201ENST00000272091 RAB11FIP4Q86YS3 637 aa14.28□□□□□ -0.12
SDE2-201ENST00000272091 SH3RF3Q8TEJ3 882 aaPredicted RBP14.28□□□□□ -0.12
SDE2-201ENST00000272091 IGSF3O75054 1194 aa14.28□□□□□ -0.12
SDE2-201ENST00000272091 MFSD6Q6ZSS7 791 aa14.28□□□□□ -0.12
SDE2-201ENST00000272091 LLPHQ9BRT6 129 aaKnown RBP14.28□□□□□ -0.12
SDE2-201ENST00000272091 COA1Q9GZY4 146 aa14.28□□□□□ -0.12
SDE2-201ENST00000272091 ANGEL1Q9UNK9 670 aaKnown RBP14.28□□□□□ -0.12
SDE2-201ENST00000272091 MINDY4BA8MYZ0 360 aa14.27□□□□□ -0.12
SDE2-201ENST00000272091 FGRP09769 529 aa14.27□□□□□ -0.12
SDE2-201ENST00000272091 CERS5Q8N5B7 392 aa14.27□□□□□ -0.12
SDE2-201ENST00000272091 CYP2D6P10635 497 aa14.27□□□□□ -0.12
SDE2-201ENST00000272091 PTPDC1A2A3K4 754 aa14.27□□□□□ -0.13
SDE2-201ENST00000272091 FDPSP14324 419 aaKnown RBP14.27□□□□□ -0.13
SDE2-201ENST00000272091 MFSD14BQ5SR56 506 aa14.27□□□□□ -0.13
SDE2-201ENST00000272091 LARP1BQ659C4 914 aaKnown RBP14.27□□□□□ -0.13
SDE2-201ENST00000272091 CRNKL1Q9BZJ0 848 aaKnown RBP14.27□□□□□ -0.13
SDE2-201ENST00000272091 CNNM2Q9H8M5 875 aa14.27□□□□□ -0.13
SDE2-201ENST00000272091 USP17L12C9JPN9 530 aa14.26□□□□□ -0.13
SDE2-201ENST00000272091 USP17L21D6R901 530 aa14.26□□□□□ -0.13
SDE2-201ENST00000272091 PPP4CP60510 307 aa14.26□□□□□ -0.13
SDE2-201ENST00000272091 DOK7Q18PE1 504 aa14.26□□□□□ -0.13
SDE2-201ENST00000272091 FOXD4L6Q3SYB3 417 aaPredicted RBP14.26□□□□□ -0.13
SDE2-201ENST00000272091 FOXD4L3Q6VB84 417 aaPredicted RBP14.26□□□□□ -0.13
SDE2-201ENST00000272091 DDX11Q96FC9 970 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms