RNA–Protein interactions for RNA: ENST00000266557.3

CD27-201, Transcript of CD27 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD27, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD27-201ENST00000266557 NMIQ13287 307 aaPredicted RBP17.9■□□□□ 0.46
CD27-201ENST00000266557 APOBEC3HQ6NTF7 200 aaKnown RBP17.9■□□□□ 0.46
CD27-201ENST00000266557 MIGA1Q8NAN2 632 aa17.9■□□□□ 0.46
CD27-201ENST00000266557 PRMT6Q96LA8 375 aaPredicted RBP17.9■□□□□ 0.46
CD27-201ENST00000266557 NOL10Q9BSC4 688 aaKnown RBP17.9■□□□□ 0.46
CD27-201ENST00000266557 DIAPH3Q9NSV4 1193 aa17.9■□□□□ 0.46
CD27-201ENST00000266557 A0A0D9SFI3 127 aa17.89■□□□□ 0.45
CD27-201ENST00000266557 VEGFAP15692 232 aaPredicted RBP17.89■□□□□ 0.45
CD27-201ENST00000266557 YY1P25490 414 aa17.89■□□□□ 0.45
CD27-201ENST00000266557 HIRAP54198 1017 aaPredicted RBP17.89■□□□□ 0.45
CD27-201ENST00000266557 PPP4CP60510 307 aa17.89■□□□□ 0.45
CD27-201ENST00000266557 DYNLL1P63167 89 aaKnown RBP17.89■□□□□ 0.45
CD27-201ENST00000266557 NBPF9Q3BBW0 867 aa17.89■□□□□ 0.45
CD27-201ENST00000266557 USP50Q70EL3 339 aaPredicted RBP17.89■□□□□ 0.45
CD27-201ENST00000266557 OSBP2Q969R2 916 aa17.89■□□□□ 0.45
CD27-201ENST00000266557 AATFQ9NY61 560 aaKnown RBP eCLIP17.89■□□□□ 0.45
CD27-201ENST00000266557 DDX60LQ5H9U9 1706 aaKnown RBP17.89■□□□□ 0.45
CD27-201ENST00000266557 MAGEB6P1A0A0J9YX57 407 aa17.88■□□□□ 0.45
CD27-201ENST00000266557 M0R2C6 588 aa17.88■□□□□ 0.45
CD27-201ENST00000266557 BAG3O95817 575 aa17.88■□□□□ 0.45
CD27-201ENST00000266557 CHMLP26374 656 aa17.88■□□□□ 0.45
CD27-201ENST00000266557 FAM227BQ96M60 508 aa17.88■□□□□ 0.45
CD27-201ENST00000266557 RIOK1Q9BRS2 568 aaKnown RBP17.88■□□□□ 0.45
CD27-201ENST00000266557 PUS7LQ9H0K6 701 aaKnown RBP17.88■□□□□ 0.45
CD27-201ENST00000266557 LAMB1P07942 1786 aa17.87■□□□□ 0.45
CD27-201ENST00000266557 ASTN2O75129 1339 aaPredicted RBP17.87■□□□□ 0.45
CD27-201ENST00000266557 CDC45O75419 566 aa17.87■□□□□ 0.45
CD27-201ENST00000266557 MBD4O95243 580 aa17.87■□□□□ 0.45
CD27-201ENST00000266557 RHBDL3P58872 404 aa17.87■□□□□ 0.45
CD27-201ENST00000266557 SPDYE2Q495Y8 402 aa17.87■□□□□ 0.45
CD27-201ENST00000266557 CDC42EP5Q6NZY7 148 aa17.87■□□□□ 0.45
CD27-201ENST00000266557 LCORLQ8N3X6 602 aa17.87■□□□□ 0.45
CD27-201ENST00000266557 SEC62Q99442 399 aaKnown RBP17.87■□□□□ 0.45
CD27-201ENST00000266557 TDRD3Q9H7E2 651 aaKnown RBP17.87■□□□□ 0.45
CD27-201ENST00000266557 ARMT1Q9H993 441 aa17.87■□□□□ 0.45
CD27-201ENST00000266557 HELLSQ9NRZ9 838 aa17.87■□□□□ 0.45
CD27-201ENST00000266557 CLRN2A0PK11 232 aa17.86■□□□□ 0.45
CD27-201ENST00000266557 MYO1BO43795 1136 aa17.86■□□□□ 0.45
CD27-201ENST00000266557 EAPPQ56P03 285 aaPredicted RBP17.86■□□□□ 0.45
CD27-201ENST00000266557 CWC27Q6UX04 472 aaKnown RBP17.86■□□□□ 0.45
CD27-201ENST00000266557 PNMA8AQ86V59 439 aaPredicted RBP17.86■□□□□ 0.45
CD27-201ENST00000266557 CERS3Q8IU89 383 aa17.86■□□□□ 0.45
CD27-201ENST00000266557 SH3RF3Q8TEJ3 882 aaPredicted RBP17.86■□□□□ 0.45
CD27-201ENST00000266557 AIDAQ96BJ3 306 aa17.86■□□□□ 0.45
CD27-201ENST00000266557 GPBP1L1Q9HC44 474 aaPredicted RBP17.86■□□□□ 0.45
CD27-201ENST00000266557 USP40Q9NVE5 1235 aa17.86■□□□□ 0.45
CD27-201ENST00000266557 ZNF70Q9UC06 446 aaPredicted RBP17.86■□□□□ 0.45
CD27-201ENST00000266557 GPAA1O43292 621 aa17.85■□□□□ 0.45
CD27-201ENST00000266557 PLCG2P16885 1265 aa17.85■□□□□ 0.45
CD27-201ENST00000266557 TEX11Q8IYF3 940 aa17.85■□□□□ 0.45
CD27-201ENST00000266557 LAMA4Q16363 1823 aa17.85■□□□□ 0.45
CD27-201ENST00000266557 RAD50Q92878 1312 aa17.84■□□□□ 0.45
CD27-201ENST00000266557 MCMDC2Q4G0Z9 681 aa17.84■□□□□ 0.45
CD27-201ENST00000266557 CCDC129Q6ZRS4 1044 aa17.84■□□□□ 0.45
CD27-201ENST00000266557 VEZTQ9HBM0 779 aa17.84■□□□□ 0.45
CD27-201ENST00000266557 GGA3Q9NZ52 723 aa17.84■□□□□ 0.45
CD27-201ENST00000266557 TMOD2Q9NZR1 351 aa17.84■□□□□ 0.45
CD27-201ENST00000266557 MYH8P13535 1937 aa17.84■□□□□ 0.45
CD27-201ENST00000266557 SIPA1L1O43166 1804 aa17.84■□□□□ 0.45
CD27-201ENST00000266557 CCDC171Q6TFL3 1326 aa17.83■□□□□ 0.45
CD27-201ENST00000266557 WDHD1O75717 1129 aaPredicted RBP17.83■□□□□ 0.44
CD27-201ENST00000266557 POTEIP0CG38 1075 aa17.83■□□□□ 0.44
CD27-201ENST00000266557 POTEJP0CG39 1038 aa17.83■□□□□ 0.44
CD27-201ENST00000266557 CACNB3P54284 484 aa17.83■□□□□ 0.44
CD27-201ENST00000266557 ANGEL2Q5VTE6 544 aaKnown RBP17.83■□□□□ 0.44
CD27-201ENST00000266557 ZNF589Q86UQ0 364 aaPredicted RBP17.83■□□□□ 0.44
CD27-201ENST00000266557 ZC3H15Q8WU90 426 aaKnown RBP17.83■□□□□ 0.44
CD27-201ENST00000266557 RUFY2Q8WXA3 655 aa17.83■□□□□ 0.44
CD27-201ENST00000266557 TRPM7Q96QT4 1865 aa17.83■□□□□ 0.44
CD27-201ENST00000266557 STRBPQ96SI9 672 aaKnown RBP17.83■□□□□ 0.44
CD27-201ENST00000266557 CRNKL1Q9BZJ0 848 aaKnown RBP17.83■□□□□ 0.44
CD27-201ENST00000266557 IL25Q9H293 177 aa17.83■□□□□ 0.44
CD27-201ENST00000266557 PITPNM2Q9BZ72 1349 aa17.82■□□□□ 0.44
CD27-201ENST00000266557 FKBP1CQ5VVH2 108 aa17.82■□□□□ 0.44
CD27-201ENST00000266557 CASC1Q6TDU7 716 aa17.82■□□□□ 0.44
CD27-201ENST00000266557 APOBEC3FQ8IUX4 373 aaKnown RBP17.82■□□□□ 0.44
CD27-201ENST00000266557 IDI2Q9BXS1 227 aa17.82■□□□□ 0.44
CD27-201ENST00000266557 SGSM2O43147 1006 aa17.81■□□□□ 0.44
CD27-201ENST00000266557 PRKAB2O43741 272 aa17.81■□□□□ 0.44
CD27-201ENST00000266557 NFIAQ12857 509 aa17.81■□□□□ 0.44
CD27-201ENST00000266557 LDHDQ86WU2 507 aa17.81■□□□□ 0.44
CD27-201ENST00000266557 ZNF784Q8NCA9 323 aaPredicted RBP17.81■□□□□ 0.44
CD27-201ENST00000266557 ESYT1Q9BSJ8 1104 aa17.81■□□□□ 0.44
CD27-201ENST00000266557 DDX4Q9NQI0 724 aaKnown RBP17.81■□□□□ 0.44
CD27-201ENST00000266557 PGAP2Q9UHJ9 254 aa17.81■□□□□ 0.44
CD27-201ENST00000266557 CLEC11AQ9Y240 323 aa17.81■□□□□ 0.44
CD27-201ENST00000266557 TCP10L2B9ZVM9 353 aa17.8■□□□□ 0.44
CD27-201ENST00000266557 KIF3CO14782 793 aa17.8■□□□□ 0.44
CD27-201ENST00000266557 GNAT2P19087 354 aa17.8■□□□□ 0.44
CD27-201ENST00000266557 MFAP1P55081 439 aaKnown RBP17.8■□□□□ 0.44
CD27-201ENST00000266557 PICALMQ13492 652 aa17.8■□□□□ 0.44
CD27-201ENST00000266557 MAPKAPK5Q8IW41 473 aa17.8■□□□□ 0.44
CD27-201ENST00000266557 TGFBRAP1Q8WUH2 860 aa17.8■□□□□ 0.44
CD27-201ENST00000266557 SDR42E1Q8WUS8 393 aa17.8■□□□□ 0.44
CD27-201ENST00000266557 FAM198AQ9UFP1 575 aa17.8■□□□□ 0.44
CD27-201ENST00000266557 SLC4A4Q9Y6R1 1079 aa17.8■□□□□ 0.44
CD27-201ENST00000266557 CNTNAP1P78357 1384 aa17.8■□□□□ 0.44
CD27-201ENST00000266557 COL2A1P02458 1487 aaPredicted RBP17.8■□□□□ 0.44
CD27-201ENST00000266557 FLT1P17948 1338 aa17.8■□□□□ 0.44
CD27-201ENST00000266557 NPM3O75607 178 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms