RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 SERTAD1Q9UHV2 236 aa18.11■□□□□ 0.49
PRPF40B-201ENST00000261897 KIF28PB7ZC32 967 aa18.11■□□□□ 0.49
PRPF40B-201ENST00000261897 ZNF213O14771 459 aa18.11■□□□□ 0.49
PRPF40B-201ENST00000261897 MYCNP04198 464 aaPredicted RBP18.11■□□□□ 0.49
PRPF40B-201ENST00000261897 TUBB4AP04350 444 aa18.11■□□□□ 0.49
PRPF40B-201ENST00000261897 TDO2P48775 406 aa18.11■□□□□ 0.49
PRPF40B-201ENST00000261897 PSME1Q06323 249 aa18.11■□□□□ 0.49
PRPF40B-201ENST00000261897 EPHA10Q5JZY3 1008 aa18.11■□□□□ 0.49
PRPF40B-201ENST00000261897 TTC39AQ5SRH9 613 aa18.11■□□□□ 0.49
PRPF40B-201ENST00000261897 LINS1Q8NG48 757 aa18.11■□□□□ 0.49
PRPF40B-201ENST00000261897 ZKSCAN3Q9BRR0 538 aa18.11■□□□□ 0.49
PRPF40B-201ENST00000261897 RTEL1Q9NZ71 1219 aa18.11■□□□□ 0.49
PRPF40B-201ENST00000261897 ADGRB1O14514 1584 aa18.11■□□□□ 0.49
PRPF40B-201ENST00000261897 MACROD2A1Z1Q3 448 aa18.11■□□□□ 0.49
PRPF40B-201ENST00000261897 CDC25AP30304 524 aa18.11■□□□□ 0.49
PRPF40B-201ENST00000261897 ENOX2Q16206 610 aaKnown RBP18.11■□□□□ 0.49
PRPF40B-201ENST00000261897 JPH2Q9BR39 696 aaPredicted RBP18.11■□□□□ 0.49
PRPF40B-201ENST00000261897 AKAP2Q9Y2D5 859 aa18.11■□□□□ 0.49
PRPF40B-201ENST00000261897 CAPN7Q9Y6W3 813 aa18.11■□□□□ 0.49
PRPF40B-201ENST00000261897 ATP7BP35670 1465 aa18.11■□□□□ 0.49
PRPF40B-201ENST00000261897 CASP14P31944 242 aa18.1■□□□□ 0.49
PRPF40B-201ENST00000261897 HDGFP51858 240 aaKnown RBP18.1■□□□□ 0.49
PRPF40B-201ENST00000261897 PDE4BQ07343 736 aa18.1■□□□□ 0.49
PRPF40B-201ENST00000261897 NFATC2IPQ8NCF5 419 aa18.1■□□□□ 0.49
PRPF40B-201ENST00000261897 HDAC6Q9UBN7 1215 aa18.1■□□□□ 0.49
PRPF40B-201ENST00000261897 CDC23Q9UJX2 597 aa18.1■□□□□ 0.49
PRPF40B-201ENST00000261897 FANCGO15287 622 aa18.1■□□□□ 0.49
PRPF40B-201ENST00000261897 CUTAO60888 179 aa18.1■□□□□ 0.49
PRPF40B-201ENST00000261897 IARSP41252 1262 aaKnown RBP18.1■□□□□ 0.49
PRPF40B-201ENST00000261897 MAP3K9P80192 1104 aa18.1■□□□□ 0.49
PRPF40B-201ENST00000261897 RBL2Q08999 1139 aa18.1■□□□□ 0.49
PRPF40B-201ENST00000261897 NOA1Q8NC60 698 aaKnown RBP18.1■□□□□ 0.49
PRPF40B-201ENST00000261897 NAPGQ99747 312 aaPredicted RBP18.1■□□□□ 0.49
PRPF40B-201ENST00000261897 GOLGA6CA6NDK9 693 aa18.1■□□□□ 0.49
PRPF40B-201ENST00000261897 ZPR1O75312 459 aa18.1■□□□□ 0.49
PRPF40B-201ENST00000261897 GOLGA6DP0CG33 693 aa18.1■□□□□ 0.49
PRPF40B-201ENST00000261897 CCDC91Q7Z6B0 441 aa18.1■□□□□ 0.49
PRPF40B-201ENST00000261897 FAM76AQ8TAV0 307 aa18.1■□□□□ 0.49
PRPF40B-201ENST00000261897 LLPHQ9BRT6 129 aaKnown RBP18.1■□□□□ 0.49
PRPF40B-201ENST00000261897 EHD4Q9H223 541 aa18.1■□□□□ 0.49
PRPF40B-201ENST00000261897 GOLGA6AQ9NYA3 693 aa18.1■□□□□ 0.49
PRPF40B-201ENST00000261897 CD163L1Q9NR16 1453 aa18.1■□□□□ 0.49
PRPF40B-201ENST00000261897 SHROOM2Q13796 1616 aa18.1■□□□□ 0.49
PRPF40B-201ENST00000261897 TTC5Q8N0Z6 440 aa18.09■□□□□ 0.49
PRPF40B-201ENST00000261897 CRB1P82279 1406 aa18.09■□□□□ 0.49
PRPF40B-201ENST00000261897 PRR29P0C7W0 189 aa18.09■□□□□ 0.49
PRPF40B-201ENST00000261897 INPP5BP32019 993 aa18.09■□□□□ 0.49
PRPF40B-201ENST00000261897 STIM1Q13586 685 aa18.09■□□□□ 0.49
PRPF40B-201ENST00000261897 KRT40Q6A162 431 aa18.09■□□□□ 0.49
PRPF40B-201ENST00000261897 HSPD1P10809 573 aaKnown RBP18.09■□□□□ 0.49
PRPF40B-201ENST00000261897 GOLGA8AA7E2F4 631 aa18.08■□□□□ 0.49
PRPF40B-201ENST00000261897 NDUFAB1O14561 156 aa18.08■□□□□ 0.49
PRPF40B-201ENST00000261897 RNASE9P60153 205 aaKnown RBP18.08■□□□□ 0.49
PRPF40B-201ENST00000261897 NCAPHQ15003 741 aa18.08■□□□□ 0.49
PRPF40B-201ENST00000261897 MROH2AA6NES4 1674 aa18.08■□□□□ 0.48
PRPF40B-201ENST00000261897 FAM170AA1A519 330 aa18.08■□□□□ 0.48
PRPF40B-201ENST00000261897 UBE2Q2LH0YL09 131 aa18.08■□□□□ 0.48
PRPF40B-201ENST00000261897 SND1Q7KZF4 910 aaKnown RBP eCLIP18.08■□□□□ 0.48
PRPF40B-201ENST00000261897 TICAM2Q86XR7 235 aa18.08■□□□□ 0.48
PRPF40B-201ENST00000261897 TAB2Q9NYJ8 693 aa18.08■□□□□ 0.48
PRPF40B-201ENST00000261897 BCCIPQ9P287 314 aaKnown RBP eCLIP18.08■□□□□ 0.48
PRPF40B-201ENST00000261897 DACH1Q9UI36 760 aa18.08■□□□□ 0.48
PRPF40B-201ENST00000261897 MROH7-TTC4A0A0A0MT08 1334 aa18.08■□□□□ 0.48
PRPF40B-201ENST00000261897 SETD1BQ9UPS6 1966 aaKnown RBP18.08■□□□□ 0.48
PRPF40B-201ENST00000261897 POTEB2H3BUK9 544 aa18.08■□□□□ 0.48
PRPF40B-201ENST00000261897 STX10O60499 249 aa18.08■□□□□ 0.48
PRPF40B-201ENST00000261897 NOP2P46087 812 aaKnown RBP18.08■□□□□ 0.48
PRPF40B-201ENST00000261897 SLC20A2Q08357 652 aa18.08■□□□□ 0.48
PRPF40B-201ENST00000261897 NUTM2AQ8IVF1 878 aaPredicted RBP18.08■□□□□ 0.48
PRPF40B-201ENST00000261897 OTUD6BQ8N6M0 293 aa18.08■□□□□ 0.48
PRPF40B-201ENST00000261897 MAP2P11137 1827 aaKnown RBP18.07■□□□□ 0.48
PRPF40B-201ENST00000261897 ALDH1L1O75891 902 aa18.07■□□□□ 0.48
PRPF40B-201ENST00000261897 CMA1P23946 247 aa18.07■□□□□ 0.48
PRPF40B-201ENST00000261897 EIF5P55010 431 aaKnown RBP18.07■□□□□ 0.48
PRPF40B-201ENST00000261897 GNGT1P63211 74 aa18.07■□□□□ 0.48
PRPF40B-201ENST00000261897 PLEKHO1Q53GL0 409 aaPredicted RBP18.07■□□□□ 0.48
PRPF40B-201ENST00000261897 CCDC181Q5TID7 509 aa18.07■□□□□ 0.48
PRPF40B-201ENST00000261897 NLRP2Q9NX02 1062 aa18.07■□□□□ 0.48
PRPF40B-201ENST00000261897 TRIM10Q9UDY6 481 aa18.07■□□□□ 0.48
PRPF40B-201ENST00000261897 CDC27P30260 824 aa18.07■□□□□ 0.48
PRPF40B-201ENST00000261897 CDR1P51861 262 aa18.07■□□□□ 0.48
PRPF40B-201ENST00000261897 MAP9Q49MG5 647 aa18.07■□□□□ 0.48
PRPF40B-201ENST00000261897 GBP6Q6ZN66 633 aa18.07■□□□□ 0.48
PRPF40B-201ENST00000261897 EFCAB6Q5THR3 1501 aa18.07■□□□□ 0.48
PRPF40B-201ENST00000261897 YEATS4O95619 227 aa18.06■□□□□ 0.48
PRPF40B-201ENST00000261897 CDK12Q9NYV4 1490 aaPredicted RBP18.06■□□□□ 0.48
PRPF40B-201ENST00000261897 FLT4P35916 1363 aa18.06■□□□□ 0.48
PRPF40B-201ENST00000261897 ATP8B1O43520 1251 aa18.06■□□□□ 0.48
PRPF40B-201ENST00000261897 HOXC9P31274 260 aa18.06■□□□□ 0.48
PRPF40B-201ENST00000261897 KRT9P35527 623 aa18.06■□□□□ 0.48
PRPF40B-201ENST00000261897 FMR1Q06787 632 aaKnown RBP eCLIP18.06■□□□□ 0.48
PRPF40B-201ENST00000261897 CCDC122Q5T0U0 273 aa18.06■□□□□ 0.48
PRPF40B-201ENST00000261897 LRRC31Q6UY01 552 aa18.06■□□□□ 0.48
PRPF40B-201ENST00000261897 ILDR1Q86SU0 546 aaPredicted RBP18.06■□□□□ 0.48
PRPF40B-201ENST00000261897 TADA2BQ86TJ2 420 aa18.06■□□□□ 0.48
PRPF40B-201ENST00000261897 SCLT1Q96NL6 688 aa18.06■□□□□ 0.48
PRPF40B-201ENST00000261897 B4E1Z4 1266 aa18.06■□□□□ 0.48
PRPF40B-201ENST00000261897 POSTNQ15063 836 aa18.06■□□□□ 0.48
PRPF40B-201ENST00000261897 PLIN2Q99541 437 aa18.06■□□□□ 0.48
PRPF40B-201ENST00000261897 BLZF1Q9H2G9 400 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms