RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 IFT81Q8WYA0 676 aa18.36■□□□□ 0.53
SREBF1-201ENST00000261646 ACTN2P35609 894 aa18.36■□□□□ 0.53
SREBF1-201ENST00000261646 PPARDQ03181 441 aa18.36■□□□□ 0.53
SREBF1-201ENST00000261646 CATIPQ7Z7H3 387 aa18.36■□□□□ 0.53
SREBF1-201ENST00000261646 CCDC114Q96M63 670 aa18.36■□□□□ 0.53
SREBF1-201ENST00000261646 RCOR1Q9UKL0 485 aa18.36■□□□□ 0.53
SREBF1-201ENST00000261646 NOP2P46087 812 aaKnown RBP18.36■□□□□ 0.53
SREBF1-201ENST00000261646 ZNF827Q17R98 1081 aa18.36■□□□□ 0.53
SREBF1-201ENST00000261646 PROSER3Q2NL68 480 aa18.36■□□□□ 0.53
SREBF1-201ENST00000261646 PLA2G4DQ86XP0 818 aa18.36■□□□□ 0.53
SREBF1-201ENST00000261646 PHKBQ93100 1093 aa18.36■□□□□ 0.53
SREBF1-201ENST00000261646 PGBD1Q96JS3 809 aa18.35■□□□□ 0.53
SREBF1-201ENST00000261646 HELLSQ9NRZ9 838 aa18.35■□□□□ 0.53
SREBF1-201ENST00000261646 MAPK8IP1Q9UQF2 711 aa18.35■□□□□ 0.53
SREBF1-201ENST00000261646 NLRP1Q9C000 1473 aa18.35■□□□□ 0.53
SREBF1-201ENST00000261646 PFKFB2O60825 505 aa18.35■□□□□ 0.53
SREBF1-201ENST00000261646 VAV2P52735 878 aa18.35■□□□□ 0.53
SREBF1-201ENST00000261646 RBM6P78332 1123 aaKnown RBP18.35■□□□□ 0.53
SREBF1-201ENST00000261646 PARD6BQ9BYG5 372 aa18.35■□□□□ 0.53
SREBF1-201ENST00000261646 TUBB2AQ13885 445 aa18.35■□□□□ 0.53
SREBF1-201ENST00000261646 KRT40Q6A162 431 aa18.35■□□□□ 0.53
SREBF1-201ENST00000261646 TUBB2BQ9BVA1 445 aa18.35■□□□□ 0.53
SREBF1-201ENST00000261646 CLIC4Q9Y696 253 aa18.35■□□□□ 0.53
SREBF1-201ENST00000261646 E7EWF7 191 aa18.34■□□□□ 0.53
SREBF1-201ENST00000261646 MYO1CO00159 1063 aa18.34■□□□□ 0.53
SREBF1-201ENST00000261646 ATP8B1O43520 1251 aa18.34■□□□□ 0.53
SREBF1-201ENST00000261646 CCDC121Q6ZUS5 278 aa18.34■□□□□ 0.53
SREBF1-201ENST00000261646 ROBO2Q9HCK4 1378 aa18.34■□□□□ 0.53
SREBF1-201ENST00000261646 EFCAB6Q5THR3 1501 aa18.34■□□□□ 0.53
SREBF1-201ENST00000261646 ANKRD65E5RJM6 399 aa18.34■□□□□ 0.53
SREBF1-201ENST00000261646 PI4K2BQ8TCG2 481 aa18.34■□□□□ 0.53
SREBF1-201ENST00000261646 CABP5Q9NP86 173 aa18.34■□□□□ 0.53
SREBF1-201ENST00000261646 DDX21Q9NR30 783 aaKnown RBP eCLIP18.34■□□□□ 0.53
SREBF1-201ENST00000261646 RMND1Q9NWS8 449 aa18.34■□□□□ 0.53
SREBF1-201ENST00000261646 TET3O43151 1660 aa18.34■□□□□ 0.53
SREBF1-201ENST00000261646 G3V3G9 751 aa18.34■□□□□ 0.53
SREBF1-201ENST00000261646 PSMA7O14818 248 aa18.34■□□□□ 0.53
SREBF1-201ENST00000261646 CUTAO60888 179 aa18.34■□□□□ 0.53
SREBF1-201ENST00000261646 TAF5LO75529 589 aa18.34■□□□□ 0.53
SREBF1-201ENST00000261646 LIG3P49916 1009 aa18.34■□□□□ 0.53
SREBF1-201ENST00000261646 CFAP58Q5T655 872 aa18.34■□□□□ 0.53
SREBF1-201ENST00000261646 DCAF8Q5TAQ9 597 aa18.34■□□□□ 0.53
SREBF1-201ENST00000261646 TBX22Q9Y458 520 aa18.34■□□□□ 0.53
SREBF1-201ENST00000261646 GOLGA6BA6NDN3 693 aa18.34■□□□□ 0.53
SREBF1-201ENST00000261646 TTC14Q96N46 770 aa18.34■□□□□ 0.53
SREBF1-201ENST00000261646 SCLT1Q96NL6 688 aa18.34■□□□□ 0.53
SREBF1-201ENST00000261646 EZRP15311 586 aaKnown RBP18.33■□□□□ 0.53
SREBF1-201ENST00000261646 POSTNQ15063 836 aa18.33■□□□□ 0.53
SREBF1-201ENST00000261646 NECTIN1Q15223 517 aa18.33■□□□□ 0.53
SREBF1-201ENST00000261646 ZNF589Q86UQ0 364 aaPredicted RBP18.33■□□□□ 0.53
SREBF1-201ENST00000261646 NEFHP12036 1026 aa18.33■□□□□ 0.52
SREBF1-201ENST00000261646 ATP1A3P13637 1013 aa18.33■□□□□ 0.52
SREBF1-201ENST00000261646 STAT6P42226 847 aa18.33■□□□□ 0.52
SREBF1-201ENST00000261646 RAD51AP2Q09MP3 1159 aa18.33■□□□□ 0.52
SREBF1-201ENST00000261646 EPC1Q9H2F5 836 aa18.33■□□□□ 0.52
SREBF1-201ENST00000261646 MMRN2Q9H8L6 949 aa18.33■□□□□ 0.52
SREBF1-201ENST00000261646 FAN1Q9Y2M0 1017 aa18.33■□□□□ 0.52
SREBF1-201ENST00000261646 CTIFO43310 598 aaKnown RBP18.33■□□□□ 0.52
SREBF1-201ENST00000261646 TTF1Q15361 905 aaPredicted RBP18.33■□□□□ 0.52
SREBF1-201ENST00000261646 BICDL1Q6ZP65 573 aa18.33■□□□□ 0.52
SREBF1-201ENST00000261646 TMTC1Q8IUR5 882 aa18.33■□□□□ 0.52
SREBF1-201ENST00000261646 KLHL34Q8N239 644 aa18.33■□□□□ 0.52
SREBF1-201ENST00000261646 B4E1Z4 1266 aa18.32■□□□□ 0.52
SREBF1-201ENST00000261646 BEND3Q5T5X7 828 aa18.32■□□□□ 0.52
SREBF1-201ENST00000261646 STAMQ92783 540 aa18.32■□□□□ 0.52
SREBF1-201ENST00000261646 ABCA6Q8N139 1617 aa18.32■□□□□ 0.52
SREBF1-201ENST00000261646 CMA1P23946 247 aa18.32■□□□□ 0.52
SREBF1-201ENST00000261646 RESTQ13127 1097 aa18.32■□□□□ 0.52
SREBF1-201ENST00000261646 SARM1Q6SZW1 724 aa18.32■□□□□ 0.52
SREBF1-201ENST00000261646 PAXIP1Q6ZW49 1069 aaPredicted RBP18.32■□□□□ 0.52
SREBF1-201ENST00000261646 SND1Q7KZF4 910 aaKnown RBP eCLIP18.32■□□□□ 0.523e-7■■■□□ 15.8
SREBF1-201ENST00000261646 DIS3L2Q8IYB7 885 aaKnown RBP18.32■□□□□ 0.52
SREBF1-201ENST00000261646 MYL10Q9BUA6 226 aa18.32■□□□□ 0.52
SREBF1-201ENST00000261646 TCP11L1Q9NUJ3 509 aa18.32■□□□□ 0.52
SREBF1-201ENST00000261646 SLFNL1Q499Z3 407 aa18.32■□□□□ 0.52
SREBF1-201ENST00000261646 ZNF594Q96JF6 807 aaPredicted RBP18.32■□□□□ 0.52
SREBF1-201ENST00000261646 ADAM21Q9UKJ8 722 aa18.32■□□□□ 0.52
SREBF1-201ENST00000261646 PCDHA5Q9Y5H7 936 aa18.32■□□□□ 0.52
SREBF1-201ENST00000261646 PHLPP2Q6ZVD8 1323 aa18.32■□□□□ 0.52
SREBF1-201ENST00000261646 BMP15O95972 392 aa18.31■□□□□ 0.52
SREBF1-201ENST00000261646 CYP21A2P08686 494 aa18.31■□□□□ 0.52
SREBF1-201ENST00000261646 PRPF4BQ13523 1007 aaKnown RBP18.31■□□□□ 0.52
SREBF1-201ENST00000261646 CYP26C1Q6V0L0 522 aa18.31■□□□□ 0.52
SREBF1-201ENST00000261646 EXOC4Q96A65 974 aa18.31■□□□□ 0.52
SREBF1-201ENST00000261646 HINFPQ9BQA5 517 aa18.31■□□□□ 0.52
SREBF1-201ENST00000261646 PYM1Q9BRP8 204 aaKnown RBP18.31■□□□□ 0.52
SREBF1-201ENST00000261646 STX10O60499 249 aa18.31■□□□□ 0.52
SREBF1-201ENST00000261646 CCDC151A5D8V7 595 aa18.31■□□□□ 0.52
SREBF1-201ENST00000261646 ATP5JP18859 108 aa18.31■□□□□ 0.52
SREBF1-201ENST00000261646 RILPL1Q5EBL4 403 aa18.31■□□□□ 0.52
SREBF1-201ENST00000261646 SAMD1Q6SPF0 538 aaPredicted RBP18.31■□□□□ 0.52
SREBF1-201ENST00000261646 FAM114A1Q8IWE2 563 aa18.31■□□□□ 0.52
SREBF1-201ENST00000261646 NSUN7Q8NE18 718 aaKnown RBP18.31■□□□□ 0.52
SREBF1-201ENST00000261646 CLIC6Q96NY7 704 aa18.31■□□□□ 0.52
SREBF1-201ENST00000261646 PSMB7Q99436 277 aa18.31■□□□□ 0.52
SREBF1-201ENST00000261646 ZKSCAN3Q9BRR0 538 aa18.31■□□□□ 0.52
SREBF1-201ENST00000261646 TLR7Q9NYK1 1049 aaKnown RBP18.31■□□□□ 0.52
SREBF1-201ENST00000261646 ANGEL1Q9UNK9 670 aaKnown RBP18.31■□□□□ 0.52
SREBF1-201ENST00000261646 IQSEC3Q9UPP2 1182 aaPredicted RBP18.31■□□□□ 0.52
SREBF1-201ENST00000261646 CTNND2Q9UQB3 1225 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms