RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 CHMP4CQ96CF2 233 aa13.44□□□□□ -0.26
CLUHP3-201ENST00000254109 FIBPO43427 364 aa13.43□□□□□ -0.26
CLUHP3-201ENST00000254109 LETM1O95202 739 aaPredicted RBP13.43□□□□□ -0.26
CLUHP3-201ENST00000254109 UQCRFS1P1P0C7P4 283 aa13.43□□□□□ -0.26
CLUHP3-201ENST00000254109 CC2D2BQ6DHV5 1058 aa13.43□□□□□ -0.26
CLUHP3-201ENST00000254109 C15orf52Q6ZUT6 534 aaKnown RBP13.43□□□□□ -0.26
CLUHP3-201ENST00000254109 STOX1Q6ZVD7 989 aa13.43□□□□□ -0.26
CLUHP3-201ENST00000254109 OSBP2Q969R2 916 aa13.43□□□□□ -0.26
CLUHP3-201ENST00000254109 RTFDC1Q9BY42 306 aaPredicted RBP13.43□□□□□ -0.26
CLUHP3-201ENST00000254109 MYO5AQ9Y4I1 1855 aaKnown RBP13.43□□□□□ -0.26
CLUHP3-201ENST00000254109 CHD4Q14839 1912 aa13.43□□□□□ -0.26
CLUHP3-201ENST00000254109 E7EWF7 191 aa13.43□□□□□ -0.26
CLUHP3-201ENST00000254109 DNM1Q05193 864 aaKnown RBP13.43□□□□□ -0.26
CLUHP3-201ENST00000254109 IMMTQ16891 758 aaKnown RBP13.43□□□□□ -0.26
CLUHP3-201ENST00000254109 DOK7Q18PE1 504 aa13.43□□□□□ -0.26
CLUHP3-201ENST00000254109 SPATA5Q8NB90 893 aa13.43□□□□□ -0.26
CLUHP3-201ENST00000254109 BRF1Q92994 677 aa13.43□□□□□ -0.26
CLUHP3-201ENST00000254109 LLPHQ9BRT6 129 aaKnown RBP13.43□□□□□ -0.26
CLUHP3-201ENST00000254109 ZC3H12CQ9C0D7 883 aaKnown RBP13.43□□□□□ -0.26
CLUHP3-201ENST00000254109 RBSNQ9H1K0 784 aa13.43□□□□□ -0.26
CLUHP3-201ENST00000254109 JAG2Q9Y219 1238 aa13.43□□□□□ -0.26
CLUHP3-201ENST00000254109 COL1A1P02452 1464 aaPredicted RBP13.42□□□□□ -0.26
CLUHP3-201ENST00000254109 KRT85P78386 507 aa13.42□□□□□ -0.26
CLUHP3-201ENST00000254109 AOC3Q16853 763 aa13.42□□□□□ -0.26
CLUHP3-201ENST00000254109 CCDC183Q5T5S1 534 aa13.42□□□□□ -0.26
CLUHP3-201ENST00000254109 ZNF804AQ7Z570 1209 aa13.42□□□□□ -0.26
CLUHP3-201ENST00000254109 RTKN2Q8IZC4 609 aa13.42□□□□□ -0.26
CLUHP3-201ENST00000254109 TSPY26PQ9H489 355 aa13.42□□□□□ -0.26
CLUHP3-201ENST00000254109 CD209Q9NNX6 404 aa13.42□□□□□ -0.26
CLUHP3-201ENST00000254109 ZNF277Q9NRM2 450 aaPredicted RBP13.42□□□□□ -0.26
CLUHP3-201ENST00000254109 GNL3LQ9NVN8 582 aaKnown RBP13.42□□□□□ -0.26
CLUHP3-201ENST00000254109 MYH13Q9UKX3 1938 aa13.42□□□□□ -0.26
CLUHP3-201ENST00000254109 PFKFB2O60825 505 aa13.41□□□□□ -0.26
CLUHP3-201ENST00000254109 FAM184AQ8NB25 1140 aa13.41□□□□□ -0.26
CLUHP3-201ENST00000254109 PPP1R9BQ96SB3 815 aa13.41□□□□□ -0.26
CLUHP3-201ENST00000254109 EYA3Q99504 573 aa13.41□□□□□ -0.26
CLUHP3-201ENST00000254109 KIF3AQ9Y496 699 aa13.41□□□□□ -0.26
CLUHP3-201ENST00000254109 ARFGEF1Q9Y6D6 1849 aa13.41□□□□□ -0.26
CLUHP3-201ENST00000254109 FER1L6Q2WGJ9 1857 aa13.41□□□□□ -0.26
CLUHP3-201ENST00000254109 DTNBO60941 627 aa13.41□□□□□ -0.26
CLUHP3-201ENST00000254109 EXOSC10Q01780 885 aaKnown RBP13.41□□□□□ -0.26
CLUHP3-201ENST00000254109 CHAF1AQ13111 956 aaPredicted RBP13.41□□□□□ -0.26
CLUHP3-201ENST00000254109 CDC37L1Q7L3B6 337 aa13.41□□□□□ -0.26
CLUHP3-201ENST00000254109 TDRD7Q8NHU6 1098 aaKnown RBP13.41□□□□□ -0.26
CLUHP3-201ENST00000254109 LRRC2Q9BYS8 371 aa13.41□□□□□ -0.26
CLUHP3-201ENST00000254109 DBNDD1Q9H9R9 158 aa13.41□□□□□ -0.26
CLUHP3-201ENST00000254109 PIH1D3Q9NQM4 214 aaKnown RBP13.41□□□□□ -0.26
CLUHP3-201ENST00000254109 H3BQV1 296 aa13.4□□□□□ -0.26
CLUHP3-201ENST00000254109 SOGA3Q5TF21 947 aa13.4□□□□□ -0.26
CLUHP3-201ENST00000254109 IFFO2Q5TF58 517 aa13.4□□□□□ -0.26
CLUHP3-201ENST00000254109 PSMD1Q99460 953 aa13.4□□□□□ -0.26
CLUHP3-201ENST00000254109 AGXT2Q9BYV1 514 aa13.4□□□□□ -0.26
CLUHP3-201ENST00000254109 G3V3G9 751 aa13.39□□□□□ -0.27
CLUHP3-201ENST00000254109 NFKBIEO00221 500 aa13.39□□□□□ -0.27
CLUHP3-201ENST00000254109 PPIP5K2O43314 1243 aa13.39□□□□□ -0.27
CLUHP3-201ENST00000254109 IL1R1P14778 569 aa13.39□□□□□ -0.27
CLUHP3-201ENST00000254109 HMGN5P82970 282 aaKnown RBP13.39□□□□□ -0.27
CLUHP3-201ENST00000254109 RASSF7Q02833 373 aa13.39□□□□□ -0.27
CLUHP3-201ENST00000254109 SCRN1Q12765 414 aa13.39□□□□□ -0.27
CLUHP3-201ENST00000254109 GRIPAP1Q4V328 841 aa13.39□□□□□ -0.27
CLUHP3-201ENST00000254109 SLC9C2Q5TAH2 1124 aa13.39□□□□□ -0.27
CLUHP3-201ENST00000254109 DCAF8Q5TAQ9 597 aa13.39□□□□□ -0.27
CLUHP3-201ENST00000254109 SUPT20HQ8NEM7 779 aa13.39□□□□□ -0.27
CLUHP3-201ENST00000254109 COA1Q9GZY4 146 aa13.39□□□□□ -0.27
CLUHP3-201ENST00000254109 PUS7LQ9H0K6 701 aaKnown RBP13.39□□□□□ -0.27
CLUHP3-201ENST00000254109 KCNQ5Q9NR82 932 aa13.39□□□□□ -0.27
CLUHP3-201ENST00000254109 DENND2AQ9ULE3 1009 aa13.39□□□□□ -0.27
CLUHP3-201ENST00000254109 LAMA4Q16363 1823 aa13.39□□□□□ -0.27
CLUHP3-201ENST00000254109 ZNF213O14771 459 aa13.39□□□□□ -0.27
CLUHP3-201ENST00000254109 GPAA1O43292 621 aa13.39□□□□□ -0.27
CLUHP3-201ENST00000254109 JAK2O60674 1132 aa13.39□□□□□ -0.27
CLUHP3-201ENST00000254109 FGAP02671 866 aa13.39□□□□□ -0.27
CLUHP3-201ENST00000254109 ADD2P35612 726 aa13.39□□□□□ -0.27
CLUHP3-201ENST00000254109 APOBRQ0VD83 1088 aa13.39□□□□□ -0.27
CLUHP3-201ENST00000254109 KIAA2012Q0VF49 1180 aa13.39□□□□□ -0.27
CLUHP3-201ENST00000254109 TTLL5Q6EMB2 1281 aa13.39□□□□□ -0.27
CLUHP3-201ENST00000254109 FERMT3Q86UX7 667 aa13.39□□□□□ -0.27
CLUHP3-201ENST00000254109 ZNF274Q96GC6 653 aaPredicted RBP13.39□□□□□ -0.27
CLUHP3-201ENST00000254109 SCAND2PQ9GZW5 306 aaPredicted RBP13.39□□□□□ -0.27
CLUHP3-201ENST00000254109 NAP1L2Q9ULW6 460 aaPredicted RBP13.39□□□□□ -0.27
CLUHP3-201ENST00000254109 COL4A5P29400 1685 aa13.39□□□□□ -0.27
CLUHP3-201ENST00000254109 SEMA3EO15041 775 aa13.38□□□□□ -0.27
CLUHP3-201ENST00000254109 IDH1O75874 414 aaKnown RBP13.38□□□□□ -0.27
CLUHP3-201ENST00000254109 YBX3P16989 372 aaKnown RBP eCLIP13.38□□□□□ -0.27
CLUHP3-201ENST00000254109 UBE3CQ15386 1083 aa13.38□□□□□ -0.27
CLUHP3-201ENST00000254109 TPRNQ4KMQ1 711 aa13.38□□□□□ -0.27
CLUHP3-201ENST00000254109 FBXL16Q8N461 479 aa13.38□□□□□ -0.27
CLUHP3-201ENST00000254109 SMARCC2Q8TAQ2 1214 aa13.38□□□□□ -0.27
CLUHP3-201ENST00000254109 TAOK3Q9H2K8 898 aa13.38□□□□□ -0.27
CLUHP3-201ENST00000254109 ZSCAN16Q9H4T2 348 aaPredicted RBP13.38□□□□□ -0.27
CLUHP3-201ENST00000254109 ABCF2Q9UG63 623 aa13.38□□□□□ -0.27
CLUHP3-201ENST00000254109 ELP1O95163 1332 aa13.38□□□□□ -0.27
CLUHP3-201ENST00000254109 SCN9AQ15858 1988 aa13.37□□□□□ -0.27
CLUHP3-201ENST00000254109 ECE2O60344 883 aa13.37□□□□□ -0.27
CLUHP3-201ENST00000254109 MCM5P33992 734 aa13.37□□□□□ -0.27
CLUHP3-201ENST00000254109 PRELPP51888 382 aa13.37□□□□□ -0.27
CLUHP3-201ENST00000254109 GTF2IP78347 998 aa13.37□□□□□ -0.27
CLUHP3-201ENST00000254109 RALYLQ86SE5 291 aaKnown RBP13.37□□□□□ -0.27
CLUHP3-201ENST00000254109 LARGE2Q8N3Y3 721 aa13.37□□□□□ -0.27
CLUHP3-201ENST00000254109 NCOA7Q8NI08 942 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms