RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 SEPT12Q8IYM1 358 aa19.46■□□□□ 0.71
ACTN4-201ENST00000252699 NUP88Q99567 741 aaPredicted RBP19.46■□□□□ 0.71
ACTN4-201ENST00000252699 RRAGBQ5VZM2 374 aa19.46■□□□□ 0.71
ACTN4-201ENST00000252699 PPP4R3AQ6IN85 833 aa19.46■□□□□ 0.71
ACTN4-201ENST00000252699 KRT27Q7Z3Y8 459 aa19.46■□□□□ 0.71
ACTN4-201ENST00000252699 PRM3Q9NNZ6 103 aa19.46■□□□□ 0.71
ACTN4-201ENST00000252699 H7C1W4 665 aa19.46■□□□□ 0.71
ACTN4-201ENST00000252699 SASH1O94885 1247 aa19.46■□□□□ 0.71
ACTN4-201ENST00000252699 FGAP02671 866 aa19.46■□□□□ 0.71
ACTN4-201ENST00000252699 XRCC6P12956 609 aaKnown RBP eCLIP19.46■□□□□ 0.718e-6■■□□□ 13.6
ACTN4-201ENST00000252699 TYRO3Q06418 890 aa19.46■□□□□ 0.71
ACTN4-201ENST00000252699 IFNL3Q8IZI9 196 aa19.46■□□□□ 0.71
ACTN4-201ENST00000252699 PHKBQ93100 1093 aa19.46■□□□□ 0.71
ACTN4-201ENST00000252699 ZC3H13Q5T200 1668 aaKnown RBP19.46■□□□□ 0.71
ACTN4-201ENST00000252699 ZSCAN12O43309 604 aa19.45■□□□□ 0.7
ACTN4-201ENST00000252699 GSDMDP57764 484 aa19.45■□□□□ 0.7
ACTN4-201ENST00000252699 CCDC40Q4G0X9 1142 aa19.45■□□□□ 0.7
ACTN4-201ENST00000252699 GPCPD1Q9NPB8 672 aa19.45■□□□□ 0.7
ACTN4-201ENST00000252699 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.45■□□□□ 0.7
ACTN4-201ENST00000252699 ATP2B4P23634 1241 aa19.45■□□□□ 0.7
ACTN4-201ENST00000252699 TRIM47Q96LD4 638 aa19.45■□□□□ 0.7
ACTN4-201ENST00000252699 GJA3Q9Y6H8 435 aa19.45■□□□□ 0.7
ACTN4-201ENST00000252699 RILPL1Q5EBL4 403 aa19.45■□□□□ 0.7
ACTN4-201ENST00000252699 PPARAQ07869 468 aa19.45■□□□□ 0.7
ACTN4-201ENST00000252699 ERFEQ4G0M1 354 aa19.45■□□□□ 0.7
ACTN4-201ENST00000252699 DIS3L2Q8IYB7 885 aaKnown RBP19.45■□□□□ 0.7
ACTN4-201ENST00000252699 KRI1Q8N9T8 703 aaKnown RBP19.45■□□□□ 0.7
ACTN4-201ENST00000252699 HSP90AA4PQ58FG1 418 aa19.44■□□□□ 0.7
ACTN4-201ENST00000252699 TEX35Q5T0J7 233 aa19.44■□□□□ 0.7
ACTN4-201ENST00000252699 LSG1Q9H089 658 aaKnown RBP19.44■□□□□ 0.7
ACTN4-201ENST00000252699 NRXN1Q9ULB1 1477 aa19.44■□□□□ 0.7
ACTN4-201ENST00000252699 TFAP4Q01664 338 aa19.44■□□□□ 0.7
ACTN4-201ENST00000252699 SPA17Q15506 151 aa19.44■□□□□ 0.7
ACTN4-201ENST00000252699 TCERG1LQ5VWI1 586 aa19.44■□□□□ 0.7
ACTN4-201ENST00000252699 MAP4K1Q92918 833 aa19.44■□□□□ 0.7
ACTN4-201ENST00000252699 ZSWIM6Q9HCJ5 1215 aa19.44■□□□□ 0.7
ACTN4-201ENST00000252699 ZNF804BA4D1E1 1349 aa19.44■□□□□ 0.7
ACTN4-201ENST00000252699 NEMFO60524 1076 aa19.44■□□□□ 0.7
ACTN4-201ENST00000252699 SUPT20HQ8NEM7 779 aa19.44■□□□□ 0.7
ACTN4-201ENST00000252699 SDR42E1Q8WUS8 393 aa19.44■□□□□ 0.7
ACTN4-201ENST00000252699 SCLT1Q96NL6 688 aa19.44■□□□□ 0.7
ACTN4-201ENST00000252699 OVOS2A0A0J9YW53 1432 aa19.44■□□□□ 0.7
ACTN4-201ENST00000252699 OVOS2Q6IE36 1432 aa19.44■□□□□ 0.7
ACTN4-201ENST00000252699 A0A1B0GVL5 298 aa19.44■□□□□ 0.7
ACTN4-201ENST00000252699 UBE3CQ15386 1083 aa19.44■□□□□ 0.7
ACTN4-201ENST00000252699 HLFQ16534 295 aa19.44■□□□□ 0.7
ACTN4-201ENST00000252699 RASEFQ8IZ41 740 aa19.44■□□□□ 0.7
ACTN4-201ENST00000252699 CPS1P31327 1500 aa19.44■□□□□ 0.7
ACTN4-201ENST00000252699 N4BP3O15049 544 aa19.43■□□□□ 0.7
ACTN4-201ENST00000252699 TTF2Q9UNY4 1162 aaKnown RBP19.43■□□□□ 0.7
ACTN4-201ENST00000252699 TBCAO75347 108 aaKnown RBP19.43■□□□□ 0.7
ACTN4-201ENST00000252699 ENOX2Q16206 610 aaKnown RBP19.43■□□□□ 0.7
ACTN4-201ENST00000252699 EPHA10Q5JZY3 1008 aa19.43■□□□□ 0.7
ACTN4-201ENST00000252699 DTHD1Q6ZMT9 781 aa19.43■□□□□ 0.7
ACTN4-201ENST00000252699 AOPEPQ8N6M6 819 aa19.43■□□□□ 0.7
ACTN4-201ENST00000252699 ASIC1P78348 528 aa19.43■□□□□ 0.7
ACTN4-201ENST00000252699 ERCC4Q92889 916 aaPredicted RBP19.43■□□□□ 0.7
ACTN4-201ENST00000252699 KIF2AO00139 706 aaPredicted RBP19.43■□□□□ 0.7
ACTN4-201ENST00000252699 TCP10Q12799 353 aa19.43■□□□□ 0.7
ACTN4-201ENST00000252699 ZNF174Q15697 407 aa19.43■□□□□ 0.7
ACTN4-201ENST00000252699 KRT79Q5XKE5 535 aa19.43■□□□□ 0.7
ACTN4-201ENST00000252699 TRMT1Q9NXH9 659 aaKnown RBP19.43■□□□□ 0.7
ACTN4-201ENST00000252699 ANTXR1Q9H6X2 564 aa19.42■□□□□ 0.7
ACTN4-201ENST00000252699 PPIP5K2O43314 1243 aa19.42■□□□□ 0.7
ACTN4-201ENST00000252699 PPP2R5BQ15173 497 aa19.42■□□□□ 0.7
ACTN4-201ENST00000252699 FAM47AQ5JRC9 791 aa19.42■□□□□ 0.7
ACTN4-201ENST00000252699 ZMYM1Q5SVZ6 1142 aa19.42■□□□□ 0.7
ACTN4-201ENST00000252699 SUSD4Q5VX71 490 aa19.42■□□□□ 0.7
ACTN4-201ENST00000252699 ANO1Q5XXA6 986 aa19.42■□□□□ 0.7
ACTN4-201ENST00000252699 ZNF772Q68DY9 489 aaPredicted RBP19.42■□□□□ 0.7
ACTN4-201ENST00000252699 TTLL11Q8NHH1 800 aa19.42■□□□□ 0.7
ACTN4-201ENST00000252699 SRP68Q9UHB9 627 aaKnown RBP19.42■□□□□ 0.7
ACTN4-201ENST00000252699 PTPRUQ92729 1446 aa19.42■□□□□ 0.7
ACTN4-201ENST00000252699 YEATS4O95619 227 aa19.42■□□□□ 0.7
ACTN4-201ENST00000252699 SERPINB2P05120 415 aa19.42■□□□□ 0.7
ACTN4-201ENST00000252699 UBASH3AP57075 661 aa19.42■□□□□ 0.7
ACTN4-201ENST00000252699 GTF3C6Q969F1 213 aa19.42■□□□□ 0.7
ACTN4-201ENST00000252699 LIG1P18858 919 aa19.42■□□□□ 0.7
ACTN4-201ENST00000252699 STXBP4Q6ZWJ1 553 aa19.42■□□□□ 0.7
ACTN4-201ENST00000252699 CDC37L1Q7L3B6 337 aa19.42■□□□□ 0.7
ACTN4-201ENST00000252699 FAM114A1Q8IWE2 563 aa19.42■□□□□ 0.7
ACTN4-201ENST00000252699 ARPP21Q9UBL0 812 aaPredicted RBP19.41■□□□□ 0.7
ACTN4-201ENST00000252699 MYO3AQ8NEV4 1616 aa19.41■□□□□ 0.7
ACTN4-201ENST00000252699 PAXIP1Q6ZW49 1069 aaPredicted RBP19.41■□□□□ 0.7
ACTN4-201ENST00000252699 C2CD5Q86YS7 1000 aa19.41■□□□□ 0.7
ACTN4-201ENST00000252699 MRPL12P52815 198 aaKnown RBP19.41■□□□□ 0.7
ACTN4-201ENST00000252699 LETM2Q2VYF4 491 aa19.41■□□□□ 0.7
ACTN4-201ENST00000252699 KRT40Q6A162 431 aa19.41■□□□□ 0.7
ACTN4-201ENST00000252699 CLEC11AQ9Y240 323 aa19.41■□□□□ 0.7
ACTN4-201ENST00000252699 PI16Q6UXB8 463 aa19.41■□□□□ 0.7
ACTN4-201ENST00000252699 MTERF4Q7Z6M4 381 aaKnown RBP19.41■□□□□ 0.7
ACTN4-201ENST00000252699 TPCN1Q9ULQ1 816 aa19.41■□□□□ 0.7
ACTN4-201ENST00000252699 VWA3AA6NCI4 1184 aa19.4■□□□□ 0.7
ACTN4-201ENST00000252699 RXRBP28702 533 aa19.4■□□□□ 0.7
ACTN4-201ENST00000252699 FAM160A1Q05DH4 1040 aa19.4■□□□□ 0.7
ACTN4-201ENST00000252699 TDRD12Q587J7 1177 aaKnown RBP19.4■□□□□ 0.7
ACTN4-201ENST00000252699 SYCP3Q8IZU3 236 aa19.4■□□□□ 0.7
ACTN4-201ENST00000252699 IQUBQ8NA54 791 aa19.4■□□□□ 0.7
ACTN4-201ENST00000252699 ADGRB1O14514 1584 aa19.4■□□□□ 0.7
ACTN4-201ENST00000252699 PSMA7O14818 248 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms