RNA–Protein interactions for RNA: ENST00000249269.8

PMPCB-201, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCB, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-201ENST00000249269 STAG2Q8N3U4 1231 aa17.24■□□□□ 0.35
PMPCB-201ENST00000249269 GTF3C6Q969F1 213 aa17.24■□□□□ 0.35
PMPCB-201ENST00000249269 FAM53CQ9NYF3 392 aa17.24■□□□□ 0.35
PMPCB-201ENST00000249269 COL15A1P39059 1388 aa17.24■□□□□ 0.35
PMPCB-201ENST00000249269 RESTQ13127 1097 aa17.24■□□□□ 0.35
PMPCB-201ENST00000249269 TAX1BP1Q86VP1 789 aa17.24■□□□□ 0.35
PMPCB-201ENST00000249269 IFT122Q9HBG6 1241 aa17.24■□□□□ 0.35
PMPCB-201ENST00000249269 ANO10Q9NW15 660 aa17.24■□□□□ 0.35
PMPCB-201ENST00000249269 RABL2AQ9UBK7 228 aaPredicted RBP17.24■□□□□ 0.35
PMPCB-201ENST00000249269 RCOR1Q9UKL0 485 aa17.24■□□□□ 0.35
PMPCB-201ENST00000249269 U3KPZ7 1027 aaPredicted RBP17.24■□□□□ 0.35
PMPCB-201ENST00000249269 G3BP1Q13283 466 aaKnown RBP eCLIP17.23■□□□□ 0.358e-6■□□□□ 9
PMPCB-201ENST00000249269 IQCB1Q15051 598 aa17.23■□□□□ 0.35
PMPCB-201ENST00000249269 LONRF1Q17RB8 773 aa17.23■□□□□ 0.35
PMPCB-201ENST00000249269 AKAP4Q5JQC9 854 aa17.23■□□□□ 0.35
PMPCB-201ENST00000249269 LINS1Q8NG48 757 aa17.23■□□□□ 0.35
PMPCB-201ENST00000249269 SHTN1A0MZ66 631 aa17.23■□□□□ 0.35
PMPCB-201ENST00000249269 KINO60870 393 aaKnown RBP17.23■□□□□ 0.35
PMPCB-201ENST00000249269 DDX58O95786 925 aaKnown RBP17.23■□□□□ 0.35
PMPCB-201ENST00000249269 NEK9Q8TD19 979 aa17.23■□□□□ 0.35
PMPCB-201ENST00000249269 BPIFA3Q9BQP9 254 aa17.23■□□□□ 0.35
PMPCB-201ENST00000249269 C9orf78Q9NZ63 289 aaPredicted RBP17.23■□□□□ 0.35
PMPCB-201ENST00000249269 TPPPO94811 219 aa17.22■□□□□ 0.35
PMPCB-201ENST00000249269 U2AF2P26368 475 aaKnown RBP eCLIP17.22■□□□□ 0.352e-10■■□□□ 11.9
PMPCB-201ENST00000249269 NMIQ13287 307 aaPredicted RBP17.22■□□□□ 0.35
PMPCB-201ENST00000249269 PTK7Q13308 1070 aa17.22■□□□□ 0.35
PMPCB-201ENST00000249269 TOB2Q14106 344 aaPredicted RBP17.22■□□□□ 0.35
PMPCB-201ENST00000249269 CATIPQ7Z7H3 387 aa17.22■□□□□ 0.35
PMPCB-201ENST00000249269 KRT222Q8N1A0 295 aa17.22■□□□□ 0.35
PMPCB-201ENST00000249269 SMARCC2Q8TAQ2 1214 aa17.22■□□□□ 0.35
PMPCB-201ENST00000249269 BICD2Q8TD16 824 aa17.22■□□□□ 0.35
PMPCB-201ENST00000249269 TSC1Q92574 1164 aa17.22■□□□□ 0.35
PMPCB-201ENST00000249269 G3BP2Q9UN86 482 aaKnown RBP17.22■□□□□ 0.35
PMPCB-201ENST00000249269 PTPN14Q15678 1187 aa17.22■□□□□ 0.35
PMPCB-201ENST00000249269 AACSQ86V21 672 aa17.22■□□□□ 0.35
PMPCB-201ENST00000249269 KIF18AQ8NI77 898 aa17.22■□□□□ 0.35
PMPCB-201ENST00000249269 ITM2BQ9Y287 266 aa17.22■□□□□ 0.35
PMPCB-201ENST00000249269 EID1Q9Y6B2 187 aa17.22■□□□□ 0.35
PMPCB-201ENST00000249269 IVNS1ABPQ9Y6Y0 642 aa17.22■□□□□ 0.35
PMPCB-201ENST00000249269 HOXA2O43364 376 aa17.21■□□□□ 0.35
PMPCB-201ENST00000249269 ATICP31939 592 aa17.21■□□□□ 0.35
PMPCB-201ENST00000249269 IGBP1P78318 339 aa17.21■□□□□ 0.35
PMPCB-201ENST00000249269 RASSF7Q02833 373 aa17.21■□□□□ 0.35
PMPCB-201ENST00000249269 CACTINQ8WUQ7 758 aaKnown RBP17.21■□□□□ 0.35
PMPCB-201ENST00000249269 OSBPL5Q9H0X9 879 aaPredicted RBP17.21■□□□□ 0.35
PMPCB-201ENST00000249269 ETAA1Q9NY74 926 aa17.21■□□□□ 0.35
PMPCB-201ENST00000249269 MYH15Q9Y2K3 1946 aa17.21■□□□□ 0.35
PMPCB-201ENST00000249269 NLRP6P59044 892 aa17.21■□□□□ 0.34
PMPCB-201ENST00000249269 SOGA3Q5TF21 947 aa17.21■□□□□ 0.34
PMPCB-201ENST00000249269 LARP1Q6PKG0 1096 aaKnown RBP17.21■□□□□ 0.34
PMPCB-201ENST00000249269 SND1Q7KZF4 910 aaKnown RBP eCLIP17.21■□□□□ 0.343e-7■■□□□ 12.2
PMPCB-201ENST00000249269 MYO1HQ8N1T3 1032 aa17.21■□□□□ 0.34
PMPCB-201ENST00000249269 NECAB1Q8N987 351 aa17.21■□□□□ 0.34
PMPCB-201ENST00000249269 IP6K1Q92551 441 aa17.21■□□□□ 0.34
PMPCB-201ENST00000249269 TMOD4Q9NZQ9 345 aa17.21■□□□□ 0.34
PMPCB-201ENST00000249269 PLEKHG2Q9H7P9 1386 aa17.2■□□□□ 0.34
PMPCB-201ENST00000249269 CPA1P15085 419 aa17.2■□□□□ 0.34
PMPCB-201ENST00000249269 C16orf45Q96MC5 204 aaPredicted RBP17.2■□□□□ 0.34
PMPCB-201ENST00000249269 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.2■□□□□ 0.34
PMPCB-201ENST00000249269 SCINQ9Y6U3 715 aa17.2■□□□□ 0.34
PMPCB-201ENST00000249269 PGBD1Q96JS3 809 aa17.2■□□□□ 0.34
PMPCB-201ENST00000249269 ZNF512BQ96KM6 892 aaPredicted RBP17.2■□□□□ 0.34
PMPCB-201ENST00000249269 C8orf37Q96NL8 207 aa17.2■□□□□ 0.34
PMPCB-201ENST00000249269 TSPYL2Q9H2G4 693 aaPredicted RBP17.2■□□□□ 0.34
PMPCB-201ENST00000249269 PSDA5PKW4 1024 aaPredicted RBP17.19■□□□□ 0.34
PMPCB-201ENST00000249269 SLC7A5Q01650 507 aa17.19■□□□□ 0.34
PMPCB-201ENST00000249269 CAMK4Q16566 473 aa17.19■□□□□ 0.34
PMPCB-201ENST00000249269 CCDC150Q8NCX0 1101 aa17.19■□□□□ 0.34
PMPCB-201ENST00000249269 TEKT1Q969V4 418 aa17.19■□□□□ 0.34
PMPCB-201ENST00000249269 NEK1Q96PY6 1258 aa17.19■□□□□ 0.34
PMPCB-201ENST00000249269 ADAMTS7Q9UKP4 1686 aa17.19■□□□□ 0.34
PMPCB-201ENST00000249269 GRM8O00222 908 aa17.19■□□□□ 0.34
PMPCB-201ENST00000249269 NR1I2O75469 434 aa17.19■□□□□ 0.34
PMPCB-201ENST00000249269 ATP5JP18859 108 aa17.19■□□□□ 0.34
PMPCB-201ENST00000249269 RRM1P23921 792 aa17.19■□□□□ 0.34
PMPCB-201ENST00000249269 PTPROQ16827 1216 aa17.19■□□□□ 0.34
PMPCB-201ENST00000249269 PLEKHO1Q53GL0 409 aaPredicted RBP17.19■□□□□ 0.34
PMPCB-201ENST00000249269 KCNV1Q6PIU1 500 aa17.19■□□□□ 0.34
PMPCB-201ENST00000249269 CCDC73Q6ZRK6 1079 aa17.19■□□□□ 0.34
PMPCB-201ENST00000249269 CKAP2LQ8IYA6 745 aa17.19■□□□□ 0.34
PMPCB-201ENST00000249269 CEP57L1Q8IYX8 460 aa17.19■□□□□ 0.34
PMPCB-201ENST00000249269 FBXL16Q8N461 479 aa17.19■□□□□ 0.34
PMPCB-201ENST00000249269 CEP63Q96MT8 703 aa17.19■□□□□ 0.34
PMPCB-201ENST00000249269 MMTAG2Q9BU76 263 aaKnown RBP17.19■□□□□ 0.34
PMPCB-201ENST00000249269 QTRT2Q9H974 415 aaKnown RBP17.19■□□□□ 0.34
PMPCB-201ENST00000249269 H3BQV1 296 aa17.18■□□□□ 0.34
PMPCB-201ENST00000249269 MYO1BO43795 1136 aa17.18■□□□□ 0.34
PMPCB-201ENST00000249269 PFKFB2O60825 505 aa17.18■□□□□ 0.34
PMPCB-201ENST00000249269 HIP1RO75146 1068 aa17.18■□□□□ 0.34
PMPCB-201ENST00000249269 TAF5LO75529 589 aa17.18■□□□□ 0.34
PMPCB-201ENST00000249269 IFFO2Q5TF58 517 aa17.18■□□□□ 0.34
PMPCB-201ENST00000249269 FSD1Q9BTV5 496 aa17.18■□□□□ 0.34
PMPCB-201ENST00000249269 MKS1Q9NXB0 559 aa17.18■□□□□ 0.34
PMPCB-201ENST00000249269 TBC1D2BQ9UPU7 963 aa17.18■□□□□ 0.34
PMPCB-201ENST00000249269 NUTM2FA1L443 756 aa17.18■□□□□ 0.34
PMPCB-201ENST00000249269 GSCP56915 257 aaPredicted RBP17.18■□□□□ 0.34
PMPCB-201ENST00000249269 FAM160A1Q05DH4 1040 aa17.18■□□□□ 0.34
PMPCB-201ENST00000249269 FAM69CQ0P6D2 419 aa17.18■□□□□ 0.34
PMPCB-201ENST00000249269 TEFQ10587 303 aa17.18■□□□□ 0.34
PMPCB-201ENST00000249269 FXNQ16595 210 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms