RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 HAND2P61296 217 aa16.79■□□□□ 0.28
SDF2-201ENST00000247020 ME3Q16798 604 aa16.79■□□□□ 0.28
SDF2-201ENST00000247020 PODNQ7Z5L7 613 aa16.79■□□□□ 0.28
SDF2-201ENST00000247020 NAV1Q8NEY1 1877 aa16.79■□□□□ 0.28
SDF2-201ENST00000247020 MTA3Q9BTC8 594 aa16.79■□□□□ 0.28
SDF2-201ENST00000247020 MTFR1LQ9H019 292 aa16.79■□□□□ 0.28
SDF2-201ENST00000247020 NBPF3Q9H094 633 aa16.79■□□□□ 0.28
SDF2-201ENST00000247020 BRCA1P38398 1863 aaKnown RBP16.78■□□□□ 0.28
SDF2-201ENST00000247020 BAG3O95817 575 aa16.78■□□□□ 0.28
SDF2-201ENST00000247020 NT5C2P49902 561 aa16.78■□□□□ 0.28
SDF2-201ENST00000247020 EVCP57679 992 aa16.78■□□□□ 0.28
SDF2-201ENST00000247020 STAG1Q8WVM7 1258 aa16.78■□□□□ 0.28
SDF2-201ENST00000247020 FAM163AQ96GL9 167 aaPredicted RBP16.78■□□□□ 0.28
SDF2-201ENST00000247020 RNF41Q9H4P4 317 aaPredicted RBP16.78■□□□□ 0.28
SDF2-201ENST00000247020 PRKAB2O43741 272 aa16.77■□□□□ 0.28
SDF2-201ENST00000247020 FKBP1AP62942 108 aaKnown RBP16.77■□□□□ 0.28
SDF2-201ENST00000247020 FGD1P98174 961 aa16.77■□□□□ 0.28
SDF2-201ENST00000247020 COL9A3Q14050 684 aaPredicted RBP16.77■□□□□ 0.28
SDF2-201ENST00000247020 AKNAD1Q5T1N1 836 aa16.77■□□□□ 0.28
SDF2-201ENST00000247020 CLEC17AQ6ZS10 378 aa16.77■□□□□ 0.28
SDF2-201ENST00000247020 ILDR1Q86SU0 546 aaPredicted RBP16.77■□□□□ 0.28
SDF2-201ENST00000247020 TTLL6Q8N841 843 aa16.77■□□□□ 0.28
SDF2-201ENST00000247020 NOL10Q9BSC4 688 aaKnown RBP16.77■□□□□ 0.28
SDF2-201ENST00000247020 KRT23Q9C075 422 aa16.77■□□□□ 0.28
SDF2-201ENST00000247020 MROH7-TTC4A0A0A0MT08 1334 aa16.77■□□□□ 0.28
SDF2-201ENST00000247020 LARGE1O95461 756 aa16.77■□□□□ 0.27
SDF2-201ENST00000247020 PLCG2P16885 1265 aa16.77■□□□□ 0.27
SDF2-201ENST00000247020 POLD1P28340 1107 aa16.77■□□□□ 0.27
SDF2-201ENST00000247020 TGFB2P61812 414 aa16.77■□□□□ 0.27
SDF2-201ENST00000247020 DYNLL1P63167 89 aaKnown RBP16.77■□□□□ 0.27
SDF2-201ENST00000247020 MFSD14BQ5SR56 506 aa16.77■□□□□ 0.27
SDF2-201ENST00000247020 TBC1D10CQ8IV04 446 aa16.77■□□□□ 0.27
SDF2-201ENST00000247020 ZNF274Q96GC6 653 aaPredicted RBP16.77■□□□□ 0.27
SDF2-201ENST00000247020 TCEANC2Q96MN5 208 aa16.77■□□□□ 0.27
SDF2-201ENST00000247020 AATFQ9NY61 560 aaKnown RBP eCLIP16.77■□□□□ 0.27
SDF2-201ENST00000247020 RIMBP2O15034 1052 aa16.76■□□□□ 0.27
SDF2-201ENST00000247020 PPARAQ07869 468 aa16.76■□□□□ 0.27
SDF2-201ENST00000247020 SBK1Q52WX2 424 aa16.76■□□□□ 0.27
SDF2-201ENST00000247020 MFSD6Q6ZSS7 791 aa16.76■□□□□ 0.27
SDF2-201ENST00000247020 CCDC83Q8IWF9 413 aa16.76■□□□□ 0.27
SDF2-201ENST00000247020 BRF1Q92994 677 aa16.76■□□□□ 0.27
SDF2-201ENST00000247020 GTF3C6Q969F1 213 aa16.76■□□□□ 0.27
SDF2-201ENST00000247020 TMEM87BQ96K49 555 aa16.76■□□□□ 0.27
SDF2-201ENST00000247020 ARPP21Q9UBL0 812 aaPredicted RBP16.76■□□□□ 0.27
SDF2-201ENST00000247020 SMC3Q9UQE7 1217 aa16.76■□□□□ 0.27
SDF2-201ENST00000247020 GAKO14976 1311 aa16.76■□□□□ 0.27
SDF2-201ENST00000247020 DDX60LQ5H9U9 1706 aaKnown RBP16.75■□□□□ 0.27
SDF2-201ENST00000247020 G3V3G9 751 aa16.75■□□□□ 0.27
SDF2-201ENST00000247020 PRC1O43663 620 aa16.75■□□□□ 0.27
SDF2-201ENST00000247020 PFKFB2O60825 505 aa16.75■□□□□ 0.27
SDF2-201ENST00000247020 DCAF8Q5TAQ9 597 aa16.75■□□□□ 0.27
SDF2-201ENST00000247020 SOGA3Q5TF21 947 aa16.75■□□□□ 0.27
SDF2-201ENST00000247020 OLFM4Q6UX06 510 aa16.75■□□□□ 0.27
SDF2-201ENST00000247020 SDR42E1Q8WUS8 393 aa16.75■□□□□ 0.27
SDF2-201ENST00000247020 TNPO1Q92973 898 aaKnown RBP16.75■□□□□ 0.27
SDF2-201ENST00000247020 GBP4Q96PP9 640 aa16.75■□□□□ 0.27
SDF2-201ENST00000247020 VPS33BQ9H267 617 aa16.75■□□□□ 0.27
SDF2-201ENST00000247020 JAG2Q9Y219 1238 aa16.75■□□□□ 0.27
SDF2-201ENST00000247020 GTF2IP78347 998 aa16.74■□□□□ 0.27
SDF2-201ENST00000247020 CCDC93Q567U6 631 aa16.74■□□□□ 0.27
SDF2-201ENST00000247020 RTKN2Q8IZC4 609 aa16.74■□□□□ 0.27
SDF2-201ENST00000247020 LLPHQ9BRT6 129 aaKnown RBP16.74■□□□□ 0.27
SDF2-201ENST00000247020 DCP1AQ9NPI6 582 aaPredicted RBP16.74■□□□□ 0.27
SDF2-201ENST00000247020 GPR75-ASB3A0A0A6YYF3 556 aa16.73■□□□□ 0.27
SDF2-201ENST00000247020 FGRP09769 529 aa16.73■□□□□ 0.27
SDF2-201ENST00000247020 PTMSP20962 102 aa16.73■□□□□ 0.27
SDF2-201ENST00000247020 ANTXR2P58335 489 aa16.73■□□□□ 0.27
SDF2-201ENST00000247020 KIAA2012Q0VF49 1180 aa16.73■□□□□ 0.27
SDF2-201ENST00000247020 ST3GAL1Q11201 340 aa16.73■□□□□ 0.27
SDF2-201ENST00000247020 UPF1Q92900 1129 aaKnown RBP eCLIP16.73■□□□□ 0.27
SDF2-201ENST00000247020 PSMD1Q99460 953 aa16.73■□□□□ 0.27
SDF2-201ENST00000247020 LARP6Q9BRS8 491 aaKnown RBP16.73■□□□□ 0.27
SDF2-201ENST00000247020 NEDD4P46934 1319 aa16.73■□□□□ 0.27
SDF2-201ENST00000247020 ECM29Q5VYK3 1845 aa16.73■□□□□ 0.27
SDF2-201ENST00000247020 BRD1O95696 1058 aa16.72■□□□□ 0.27
SDF2-201ENST00000247020 KCNA3P22001 575 aa16.72■□□□□ 0.27
SDF2-201ENST00000247020 ANGEL1Q9UNK9 670 aaKnown RBP16.72■□□□□ 0.27
SDF2-201ENST00000247020 SCN9AQ15858 1988 aa16.72■□□□□ 0.27
SDF2-201ENST00000247020 MYH1P12882 1939 aa16.72■□□□□ 0.27
SDF2-201ENST00000247020 WDR33Q9C0J8 1336 aaKnown RBP16.72■□□□□ 0.27
SDF2-201ENST00000247020 DDX11L8A8MPP1 907 aa16.72■□□□□ 0.27
SDF2-201ENST00000247020 SLC3A2P08195 630 aaKnown RBP16.72■□□□□ 0.27
SDF2-201ENST00000247020 PDCP20941 246 aa16.72■□□□□ 0.27
SDF2-201ENST00000247020 CTDSPL2Q05D32 466 aa16.72■□□□□ 0.27
SDF2-201ENST00000247020 GRIK5Q16478 980 aa16.72■□□□□ 0.27
SDF2-201ENST00000247020 STRIP1Q5VSL9 837 aa16.72■□□□□ 0.27
SDF2-201ENST00000247020 CTR9Q6PD62 1173 aa16.72■□□□□ 0.27
SDF2-201ENST00000247020 MRIQ9BWK5 157 aa16.72■□□□□ 0.27
SDF2-201ENST00000247020 LRRC2Q9BYS8 371 aa16.72■□□□□ 0.27
SDF2-201ENST00000247020 MKRN1Q9UHC7 482 aaKnown RBP16.72■□□□□ 0.27
SDF2-201ENST00000247020 ROBO3Q96MS0 1386 aa16.71■□□□□ 0.27
SDF2-201ENST00000247020 B4E1Z4 1266 aa16.71■□□□□ 0.27
SDF2-201ENST00000247020 SH2B2O14492 632 aaPredicted RBP16.71■□□□□ 0.27
SDF2-201ENST00000247020 DPEP1P16444 411 aa16.71■□□□□ 0.27
SDF2-201ENST00000247020 GJB2P29033 226 aa16.71■□□□□ 0.27
SDF2-201ENST00000247020 LIFRP42702 1097 aa16.71■□□□□ 0.27
SDF2-201ENST00000247020 APOBRQ0VD83 1088 aa16.71■□□□□ 0.27
SDF2-201ENST00000247020 NBR1Q14596 966 aa16.71■□□□□ 0.27
SDF2-201ENST00000247020 SART3Q15020 963 aaKnown RBP16.71■□□□□ 0.27
SDF2-201ENST00000247020 DIXDC1Q155Q3 683 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms