RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 ALG1Q9BT22 464 aa25.12■■□□□ 1.61
SH2D3A-201ENST00000245908 CHD4Q14839 1912 aa25.12■■□□□ 1.61
SH2D3A-201ENST00000245908 B4E1Z4 1266 aa25.11■■□□□ 1.61
SH2D3A-201ENST00000245908 CMA1P23946 247 aa25.11■■□□□ 1.61
SH2D3A-201ENST00000245908 WNK3Q9BYP7 1800 aa25.11■■□□□ 1.61
SH2D3A-201ENST00000245908 CPLX2Q6PUV4 134 aaKnown RBP25.11■■□□□ 1.61
SH2D3A-201ENST00000245908 AIDAQ96BJ3 306 aa25.11■■□□□ 1.61
SH2D3A-201ENST00000245908 TIAM2Q8IVF5 1701 aa25.1■■□□□ 1.61
SH2D3A-201ENST00000245908 SLC39A14Q15043 492 aa25.1■■□□□ 1.61
SH2D3A-201ENST00000245908 SGMS1Q86VZ5 419 aa25.1■■□□□ 1.61
SH2D3A-201ENST00000245908 IGDCC4Q8TDY8 1250 aa25.1■■□□□ 1.61
SH2D3A-201ENST00000245908 ARID3AQ99856 593 aa25.1■■□□□ 1.61
SH2D3A-201ENST00000245908 PRDM10Q9NQV6 1147 aa25.1■■□□□ 1.61
SH2D3A-201ENST00000245908 ZNF202O95125 648 aa25.1■■□□□ 1.61
SH2D3A-201ENST00000245908 CDC27P30260 824 aa25.1■■□□□ 1.61
SH2D3A-201ENST00000245908 SPATA5Q8NB90 893 aa25.1■■□□□ 1.61
SH2D3A-201ENST00000245908 AIFM3Q96NN9 605 aa25.1■■□□□ 1.61
SH2D3A-201ENST00000245908 SLC5A1P13866 664 aa25.09■■□□□ 1.61
SH2D3A-201ENST00000245908 RBM6P78332 1123 aaKnown RBP25.09■■□□□ 1.61
SH2D3A-201ENST00000245908 HELBQ8NG08 1087 aaPredicted RBP25.09■■□□□ 1.61
SH2D3A-201ENST00000245908 BCL2L12Q9HB09 334 aa25.09■■□□□ 1.61
SH2D3A-201ENST00000245908 LY9Q9HBG7 655 aa25.09■■□□□ 1.61
SH2D3A-201ENST00000245908 SENP2Q9HC62 589 aa25.09■■□□□ 1.61
SH2D3A-201ENST00000245908 PATL2C9JE40 543 aaKnown RBP25.09■■□□□ 1.61
SH2D3A-201ENST00000245908 PFKFB1P16118 471 aa25.09■■□□□ 1.61
SH2D3A-201ENST00000245908 KRT40Q6A162 431 aa25.09■■□□□ 1.61
SH2D3A-201ENST00000245908 VPS37DQ86XT2 251 aa25.09■■□□□ 1.61
SH2D3A-201ENST00000245908 KAT6BQ8WYB5 2073 aa25.08■■□□□ 1.61
SH2D3A-201ENST00000245908 DOT1LQ8TEK3 1739 aa25.08■■□□□ 1.61
SH2D3A-201ENST00000245908 ZBTB43O43298 467 aa25.08■■□□□ 1.61
SH2D3A-201ENST00000245908 SLC3A2P08195 630 aaKnown RBP25.08■■□□□ 1.61
SH2D3A-201ENST00000245908 ZRSR1Q15695 479 aaKnown RBP25.08■■□□□ 1.61
SH2D3A-201ENST00000245908 NTRK3Q16288 839 aa25.08■■□□□ 1.61
SH2D3A-201ENST00000245908 DPCR1Q3MIW9 517 aa25.08■■□□□ 1.61
SH2D3A-201ENST00000245908 C16orf45Q96MC5 204 aaPredicted RBP25.08■■□□□ 1.61
SH2D3A-201ENST00000245908 EPB41L4AQ9HCS5 686 aaPredicted RBP25.08■■□□□ 1.61
SH2D3A-201ENST00000245908 MROH7-TTC4A0A0A0MT08 1334 aa25.08■■□□□ 1.6
SH2D3A-201ENST00000245908 EXOC5O00471 708 aa25.07■■□□□ 1.6
SH2D3A-201ENST00000245908 CTIFO43310 598 aaKnown RBP25.07■■□□□ 1.6
SH2D3A-201ENST00000245908 RXRAP19793 462 aa25.07■■□□□ 1.6
SH2D3A-201ENST00000245908 GTPBP4Q9BZE4 634 aaKnown RBP25.07■■□□□ 1.6
SH2D3A-201ENST00000245908 WDHD1O75717 1129 aaPredicted RBP25.07■■□□□ 1.6
SH2D3A-201ENST00000245908 MAP3K12Q12852 859 aa25.07■■□□□ 1.6
SH2D3A-201ENST00000245908 MICU3Q86XE3 530 aa25.07■■□□□ 1.6
SH2D3A-201ENST00000245908 IFNL3Q8IZI9 196 aa25.07■■□□□ 1.6
SH2D3A-201ENST00000245908 SYTL4Q96C24 671 aaPredicted RBP25.07■■□□□ 1.6
SH2D3A-201ENST00000245908 ZHX1Q9UKY1 873 aaPredicted RBP25.07■■□□□ 1.6
SH2D3A-201ENST00000245908 PPP6R2O75170 966 aa25.06■■□□□ 1.6
SH2D3A-201ENST00000245908 LIFRP42702 1097 aa25.06■■□□□ 1.6
SH2D3A-201ENST00000245908 NLRP12P59046 1061 aa25.06■■□□□ 1.6
SH2D3A-201ENST00000245908 RASGRF1Q13972 1273 aa25.06■■□□□ 1.6
SH2D3A-201ENST00000245908 ARID5BQ14865 1188 aa25.06■■□□□ 1.6
SH2D3A-201ENST00000245908 FBXW7Q969H0 707 aa25.06■■□□□ 1.6
SH2D3A-201ENST00000245908 TIGD1Q96MW7 591 aa25.06■■□□□ 1.6
SH2D3A-201ENST00000245908 TNNT1P13805 278 aa25.06■■□□□ 1.6
SH2D3A-201ENST00000245908 TMEM67Q5HYA8 995 aa25.06■■□□□ 1.6
SH2D3A-201ENST00000245908 MAGEB6Q8N7X4 407 aa25.06■■□□□ 1.6
SH2D3A-201ENST00000245908 PHKBQ93100 1093 aa25.06■■□□□ 1.6
SH2D3A-201ENST00000245908 FAM217BQ9NTX9 383 aaPredicted RBP25.06■■□□□ 1.6
SH2D3A-201ENST00000245908 GOLGA8AA7E2F4 631 aa25.05■■□□□ 1.6
SH2D3A-201ENST00000245908 MBD4O95243 580 aa25.05■■□□□ 1.6
SH2D3A-201ENST00000245908 EIF5P55010 431 aaKnown RBP25.05■■□□□ 1.6
SH2D3A-201ENST00000245908 NFXL1Q6ZNB6 911 aa25.05■■□□□ 1.6
SH2D3A-201ENST00000245908 NAPBQ9H115 298 aa25.05■■□□□ 1.6
SH2D3A-201ENST00000245908 STK36Q9NRP7 1315 aa25.05■■□□□ 1.6
SH2D3A-201ENST00000245908 SMTNL1A8MU46 457 aa25.05■■□□□ 1.6
SH2D3A-201ENST00000245908 IARSP41252 1262 aaKnown RBP25.05■■□□□ 1.6
SH2D3A-201ENST00000245908 PTPAQ15257 358 aa25.05■■□□□ 1.6
SH2D3A-201ENST00000245908 SUSD4Q5VX71 490 aa25.05■■□□□ 1.6
SH2D3A-201ENST00000245908 NID2Q14112 1375 aa25.04■■□□□ 1.6
SH2D3A-201ENST00000245908 PHLPP1O60346 1717 aa25.04■■□□□ 1.6
SH2D3A-201ENST00000245908 CCDC69A6NI79 296 aa25.04■■□□□ 1.6
SH2D3A-201ENST00000245908 FAM177BA6PVY3 158 aa25.04■■□□□ 1.6
SH2D3A-201ENST00000245908 RANBP6O60518 1105 aaKnown RBP25.04■■□□□ 1.6
SH2D3A-201ENST00000245908 U2AF2P26368 475 aaKnown RBP eCLIP25.04■■□□□ 1.6
SH2D3A-201ENST00000245908 MARCKSP29966 332 aaPredicted RBP25.04■■□□□ 1.6
SH2D3A-201ENST00000245908 CCZ1BP86790 482 aa25.04■■□□□ 1.6
SH2D3A-201ENST00000245908 CCZ1P86791 482 aaPredicted RBP25.04■■□□□ 1.6
SH2D3A-201ENST00000245908 TPD52L1Q16890 204 aaPredicted RBP25.04■■□□□ 1.6
SH2D3A-201ENST00000245908 JMYQ8N9B5 988 aa25.04■■□□□ 1.6
SH2D3A-201ENST00000245908 CNNM2Q9H8M5 875 aa25.04■■□□□ 1.6
SH2D3A-201ENST00000245908 HPSEQ9Y251 543 aa25.04■■□□□ 1.6
SH2D3A-201ENST00000245908 FAM237AA0A1B0GTK4 181 aa25.03■■□□□ 1.6
SH2D3A-201ENST00000245908 NBPF11Q86T75 865 aa25.03■■□□□ 1.6
SH2D3A-201ENST00000245908 BCORQ6W2J9 1755 aa25.03■■□□□ 1.6
SH2D3A-201ENST00000245908 COL16A1Q07092 1604 aaPredicted RBP25.03■■□□□ 1.6
SH2D3A-201ENST00000245908 GSDMDP57764 484 aa25.03■■□□□ 1.6
SH2D3A-201ENST00000245908 FILIP1Q7Z7B0 1213 aa25.03■■□□□ 1.6
SH2D3A-201ENST00000245908 MAP3K14Q99558 947 aa25.03■■□□□ 1.6
SH2D3A-201ENST00000245908 OSBPL5Q9H0X9 879 aaPredicted RBP25.03■■□□□ 1.6
SH2D3A-201ENST00000245908 INCENPQ9NQS7 918 aa25.03■■□□□ 1.6
SH2D3A-201ENST00000245908 ZSWIM5Q9P217 1185 aa25.03■■□□□ 1.6
SH2D3A-201ENST00000245908 IMPACTQ9P2X3 320 aa25.03■■□□□ 1.6
SH2D3A-201ENST00000245908 SKILP12757 684 aa25.02■■□□□ 1.6
SH2D3A-201ENST00000245908 CTDSPL2Q05D32 466 aa25.02■■□□□ 1.6
SH2D3A-201ENST00000245908 MPHOSPH8Q99549 860 aa25.02■■□□□ 1.6
SH2D3A-201ENST00000245908 ARMT1Q9H993 441 aa25.02■■□□□ 1.6
SH2D3A-201ENST00000245908 PAXBP1Q9Y5B6 917 aa25.02■■□□□ 1.6
SH2D3A-201ENST00000245908 TACC3Q9Y6A5 838 aa25.02■■□□□ 1.6
SH2D3A-201ENST00000245908 GSG1L2A8MUP6 293 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms