RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 ETF1P62495 437 aaKnown RBP10.55□□□□□ -0.72
COL21A1-201ENST00000244728 SYCP1Q15431 976 aa10.55□□□□□ -0.72
COL21A1-201ENST00000244728 MAP9Q49MG5 647 aa10.55□□□□□ -0.72
COL21A1-201ENST00000244728 WDR78Q5VTH9 848 aa10.55□□□□□ -0.72
COL21A1-201ENST00000244728 BRAPQ7Z569 592 aa10.55□□□□□ -0.72
COL21A1-201ENST00000244728 NEK11Q8NG66 645 aa10.55□□□□□ -0.72
COL21A1-201ENST00000244728 RHOXF2Q9BQY4 288 aa10.55□□□□□ -0.72
COL21A1-201ENST00000244728 KIAA1468Q9P260 1216 aa10.55□□□□□ -0.72
COL21A1-201ENST00000244728 ATP7BP35670 1465 aa10.55□□□□□ -0.72
COL21A1-201ENST00000244728 PATL2C9JE40 543 aaKnown RBP10.54□□□□□ -0.72
COL21A1-201ENST00000244728 CCDC144BQ3MJ40 725 aa10.54□□□□□ -0.72
COL21A1-201ENST00000244728 SPTY2D1Q68D10 685 aaPredicted RBP10.54□□□□□ -0.72
COL21A1-201ENST00000244728 IGSF1Q8N6C5 1336 aa10.54□□□□□ -0.72
COL21A1-201ENST00000244728 ANO1Q5XXA6 986 aa10.54□□□□□ -0.72
COL21A1-201ENST00000244728 IL25Q9H293 177 aa10.54□□□□□ -0.72
COL21A1-201ENST00000244728 CHD1O14646 1710 aa10.54□□□□□ -0.72
COL21A1-201ENST00000244728 CTAGE15A4D2H0 777 aa10.54□□□□□ -0.72
COL21A1-201ENST00000244728 CTAGE8P0CG41 777 aa10.54□□□□□ -0.72
COL21A1-201ENST00000244728 STX17P56962 302 aa10.54□□□□□ -0.72
COL21A1-201ENST00000244728 NLRP12P59046 1061 aa10.54□□□□□ -0.72
COL21A1-201ENST00000244728 NECTIN1Q15223 517 aa10.54□□□□□ -0.72
COL21A1-201ENST00000244728 CTAGE6Q86UF2 777 aa10.54□□□□□ -0.72
COL21A1-201ENST00000244728 CTAGE4Q8IX94 777 aa10.54□□□□□ -0.72
COL21A1-201ENST00000244728 PHKBQ93100 1093 aa10.54□□□□□ -0.72
COL21A1-201ENST00000244728 RASSF4Q9H2L5 321 aa10.54□□□□□ -0.72
COL21A1-201ENST00000244728 TCP11L1Q9NUJ3 509 aa10.54□□□□□ -0.72
COL21A1-201ENST00000244728 CCNL1Q9UK58 526 aaPredicted RBP10.54□□□□□ -0.72
COL21A1-201ENST00000244728 N4BP3O15049 544 aa10.54□□□□□ -0.72
COL21A1-201ENST00000244728 RDXP35241 583 aaKnown RBP10.54□□□□□ -0.72
COL21A1-201ENST00000244728 ST5P78524 1137 aa10.54□□□□□ -0.72
COL21A1-201ENST00000244728 TCIRG1Q13488 830 aa10.54□□□□□ -0.72
COL21A1-201ENST00000244728 ZNF589Q86UQ0 364 aaPredicted RBP10.54□□□□□ -0.72
COL21A1-201ENST00000244728 DHX58Q96C10 678 aa10.54□□□□□ -0.72
COL21A1-201ENST00000244728 CDC25BP30305 580 aa10.53□□□□□ -0.72
COL21A1-201ENST00000244728 TERF2Q15554 542 aa10.53□□□□□ -0.72
COL21A1-201ENST00000244728 SPECC1Q5M775 1068 aa10.53□□□□□ -0.72
COL21A1-201ENST00000244728 ZNF569Q5MCW4 686 aa10.53□□□□□ -0.72
COL21A1-201ENST00000244728 SAP30BPQ9UHR5 308 aaKnown RBP10.53□□□□□ -0.72
COL21A1-201ENST00000244728 PDE8AO60658 829 aa10.53□□□□□ -0.72
COL21A1-201ENST00000244728 CENPHQ9H3R5 247 aa10.53□□□□□ -0.72
COL21A1-201ENST00000244728 CNNM2Q9H8M5 875 aa10.53□□□□□ -0.72
COL21A1-201ENST00000244728 PCDHA7Q9UN72 937 aa10.53□□□□□ -0.72
COL21A1-201ENST00000244728 AXIN2Q9Y2T1 843 aa10.53□□□□□ -0.72
COL21A1-201ENST00000244728 USP27XA6NNY8 438 aa10.53□□□□□ -0.72
COL21A1-201ENST00000244728 IVLP07476 585 aa10.53□□□□□ -0.72
COL21A1-201ENST00000244728 CTDSPL2Q05D32 466 aa10.53□□□□□ -0.72
COL21A1-201ENST00000244728 SCRN1Q12765 414 aa10.53□□□□□ -0.72
COL21A1-201ENST00000244728 CTR9Q6PD62 1173 aa10.53□□□□□ -0.72
COL21A1-201ENST00000244728 SLF2Q8IX21 1173 aa10.53□□□□□ -0.72
COL21A1-201ENST00000244728 PPP1R13BQ96KQ4 1090 aa10.53□□□□□ -0.72
COL21A1-201ENST00000244728 ZCCHC11Q5TAX3 1644 aaKnown RBP10.53□□□□□ -0.72
COL21A1-201ENST00000244728 USP6P35125 1406 aa10.52□□□□□ -0.72
COL21A1-201ENST00000244728 ADALQ6DHV7 355 aa10.52□□□□□ -0.72
COL21A1-201ENST00000244728 CEP112Q8N8E3 955 aa10.52□□□□□ -0.72
COL21A1-201ENST00000244728 APPBP2Q92624 585 aa10.52□□□□□ -0.72
COL21A1-201ENST00000244728 PRDM4Q9UKN5 801 aa10.52□□□□□ -0.72
COL21A1-201ENST00000244728 SETBP1Q9Y6X0 1596 aa10.52□□□□□ -0.72
COL21A1-201ENST00000244728 REREQ9P2R6 1566 aa10.52□□□□□ -0.73
COL21A1-201ENST00000244728 CTAGE9A4FU28 777 aa10.52□□□□□ -0.73
COL21A1-201ENST00000244728 ARHGAP6O43182 974 aa10.52□□□□□ -0.73
COL21A1-201ENST00000244728 YEATS4O95619 227 aa10.52□□□□□ -0.73
COL21A1-201ENST00000244728 EIF6P56537 245 aaKnown RBP10.52□□□□□ -0.73
COL21A1-201ENST00000244728 SMC1AQ14683 1233 aaKnown RBP10.52□□□□□ -0.73
COL21A1-201ENST00000244728 DPCR1Q3MIW9 517 aa10.52□□□□□ -0.73
COL21A1-201ENST00000244728 RBM26Q5T8P6 1007 aaKnown RBP10.52□□□□□ -0.73
COL21A1-201ENST00000244728 IQCEQ6IPM2 695 aa10.52□□□□□ -0.73
COL21A1-201ENST00000244728 TMTC2Q8N394 836 aa10.52□□□□□ -0.73
COL21A1-201ENST00000244728 PGBD1Q96JS3 809 aa10.52□□□□□ -0.73
COL21A1-201ENST00000244728 UIMC1Q96RL1 719 aa10.52□□□□□ -0.73
COL21A1-201ENST00000244728 ABCC3O15438 1527 aa10.52□□□□□ -0.73
COL21A1-201ENST00000244728 NDUFA8P51970 172 aa10.52□□□□□ -0.73
COL21A1-201ENST00000244728 MTX1Q13505 466 aa10.52□□□□□ -0.73
COL21A1-201ENST00000244728 POLA2Q14181 598 aa10.52□□□□□ -0.73
COL21A1-201ENST00000244728 SHTN1A0MZ66 631 aa10.52□□□□□ -0.73
COL21A1-201ENST00000244728 MTIF2P46199 727 aaKnown RBP10.52□□□□□ -0.73
COL21A1-201ENST00000244728 KMT5BQ4FZB7 885 aa10.52□□□□□ -0.73
COL21A1-201ENST00000244728 TRAPPC3LQ5T215 181 aa10.52□□□□□ -0.73
COL21A1-201ENST00000244728 TCERG1LQ5VWI1 586 aa10.52□□□□□ -0.73
COL21A1-201ENST00000244728 PLA2G4DQ86XP0 818 aa10.52□□□□□ -0.73
COL21A1-201ENST00000244728 CMTR1Q8N1G2 835 aaKnown RBP10.52□□□□□ -0.73
COL21A1-201ENST00000244728 CCDC87Q9NVE4 849 aa10.52□□□□□ -0.73
COL21A1-201ENST00000244728 ZNF532Q9HCE3 1301 aa10.51□□□□□ -0.73
COL21A1-201ENST00000244728 TRIM75PA6NK02 468 aa10.51□□□□□ -0.73
COL21A1-201ENST00000244728 LDHBP07195 334 aaKnown RBP10.51□□□□□ -0.73
COL21A1-201ENST00000244728 PUM3Q15397 648 aaKnown RBP10.51□□□□□ -0.73
COL21A1-201ENST00000244728 CACNA2D4Q7Z3S7 1137 aa10.51□□□□□ -0.73
COL21A1-201ENST00000244728 CABP5Q9NP86 173 aa10.51□□□□□ -0.73
COL21A1-201ENST00000244728 AATFQ9NY61 560 aaKnown RBP eCLIP10.51□□□□□ -0.73
COL21A1-201ENST00000244728 VIRMAQ69YN4 1812 aaKnown RBP10.51□□□□□ -0.73
COL21A1-201ENST00000244728 PFKFB2O60825 505 aa10.51□□□□□ -0.73
COL21A1-201ENST00000244728 SEC31AO94979 1220 aaKnown RBP10.51□□□□□ -0.73
COL21A1-201ENST00000244728 USP8P40818 1118 aa10.51□□□□□ -0.73
COL21A1-201ENST00000244728 RESTQ13127 1097 aa10.51□□□□□ -0.73
COL21A1-201ENST00000244728 ZSCAN26Q16670 478 aa10.51□□□□□ -0.73
COL21A1-201ENST00000244728 PTPN21Q16825 1174 aa10.51□□□□□ -0.73
COL21A1-201ENST00000244728 KANK3Q6NY19 840 aa10.51□□□□□ -0.73
COL21A1-201ENST00000244728 PI16Q6UXB8 463 aa10.51□□□□□ -0.73
COL21A1-201ENST00000244728 ANKRD7Q92527 254 aa10.51□□□□□ -0.73
COL21A1-201ENST00000244728 HELLSQ9NRZ9 838 aa10.51□□□□□ -0.73
COL21A1-201ENST00000244728 DBNLQ9UJU6 430 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms