RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 CTDSPL2Q05D32 466 aa18■□□□□ 0.47
HDHD3-201ENST00000238379 TRDNQ13061 729 aa18■□□□□ 0.47
HDHD3-201ENST00000238379 MFSD14BQ5SR56 506 aa18■□□□□ 0.47
HDHD3-201ENST00000238379 GIMAP6Q6P9H5 292 aa18■□□□□ 0.47
HDHD3-201ENST00000238379 NKX2-3Q8TAU0 364 aa18■□□□□ 0.47
HDHD3-201ENST00000238379 ZNF219Q9P2Y4 722 aaPredicted RBP18■□□□□ 0.47
HDHD3-201ENST00000238379 TACC3Q9Y6A5 838 aa18■□□□□ 0.47
HDHD3-201ENST00000238379 WDR19Q8NEZ3 1342 aa18■□□□□ 0.47
HDHD3-201ENST00000238379 PRC1O43663 620 aa17.99■□□□□ 0.47
HDHD3-201ENST00000238379 ZBTB7AO95365 584 aa17.99■□□□□ 0.47
HDHD3-201ENST00000238379 DIXDC1Q155Q3 683 aa17.99■□□□□ 0.47
HDHD3-201ENST00000238379 CC2D2BQ6DHV5 1058 aa17.99■□□□□ 0.47
HDHD3-201ENST00000238379 CRNKL1Q9BZJ0 848 aaKnown RBP17.99■□□□□ 0.47
HDHD3-201ENST00000238379 ZDHHC9Q9Y397 364 aa17.99■□□□□ 0.47
HDHD3-201ENST00000238379 TIAM2Q8IVF5 1701 aa17.99■□□□□ 0.47
HDHD3-201ENST00000238379 NEDD4P46934 1319 aa17.98■□□□□ 0.47
HDHD3-201ENST00000238379 LDHCP07864 332 aa17.98■□□□□ 0.47
HDHD3-201ENST00000238379 KCNA3P22001 575 aa17.98■□□□□ 0.47
HDHD3-201ENST00000238379 PPP4CP60510 307 aa17.98■□□□□ 0.47
HDHD3-201ENST00000238379 DOK7Q18PE1 504 aa17.98■□□□□ 0.47
HDHD3-201ENST00000238379 AKNAD1Q5T1N1 836 aa17.98■□□□□ 0.47
HDHD3-201ENST00000238379 ANAPC4Q9UJX5 808 aa17.98■□□□□ 0.47
HDHD3-201ENST00000238379 DLEC1Q9Y238 1755 aa17.98■□□□□ 0.47
HDHD3-201ENST00000238379 EVCP57679 992 aa17.98■□□□□ 0.47
HDHD3-201ENST00000238379 STAG1Q8WVM7 1258 aa17.98■□□□□ 0.47
HDHD3-201ENST00000238379 INCENPQ9NQS7 918 aa17.98■□□□□ 0.47
HDHD3-201ENST00000238379 SMC3Q9UQE7 1217 aa17.98■□□□□ 0.47
HDHD3-201ENST00000238379 MROH7-TTC4A0A0A0MT08 1334 aa17.97■□□□□ 0.47
HDHD3-201ENST00000238379 DPEP1P16444 411 aa17.97■□□□□ 0.47
HDHD3-201ENST00000238379 PPARAQ07869 468 aa17.97■□□□□ 0.47
HDHD3-201ENST00000238379 APOBRQ0VD83 1088 aa17.97■□□□□ 0.47
HDHD3-201ENST00000238379 CYB5R4Q7L1T6 521 aa17.97■□□□□ 0.47
HDHD3-201ENST00000238379 TTLL6Q8N841 843 aa17.97■□□□□ 0.47
HDHD3-201ENST00000238379 UPF1Q92900 1129 aaKnown RBP eCLIP17.97■□□□□ 0.47
HDHD3-201ENST00000238379 FAM163AQ96GL9 167 aaPredicted RBP17.97■□□□□ 0.47
HDHD3-201ENST00000238379 MTFR1LQ9H019 292 aa17.97■□□□□ 0.47
HDHD3-201ENST00000238379 DCP1AQ9NPI6 582 aaPredicted RBP17.97■□□□□ 0.47
HDHD3-201ENST00000238379 GPHNQ9NQX3 736 aaPredicted RBP17.97■□□□□ 0.47
HDHD3-201ENST00000238379 ATP8A2Q9NTI2 1148 aa17.97■□□□□ 0.47
HDHD3-201ENST00000238379 B4E1Z4 1266 aa17.96■□□□□ 0.47
HDHD3-201ENST00000238379 STK3Q13188 491 aa17.96■□□□□ 0.47
HDHD3-201ENST00000238379 CLEC17AQ6ZS10 378 aa17.96■□□□□ 0.47
HDHD3-201ENST00000238379 MFSD6Q6ZSS7 791 aa17.96■□□□□ 0.47
HDHD3-201ENST00000238379 PODNQ7Z5L7 613 aa17.96■□□□□ 0.47
HDHD3-201ENST00000238379 GTF3C6Q969F1 213 aa17.96■□□□□ 0.47
HDHD3-201ENST00000238379 CNNM2Q9H8M5 875 aa17.96■□□□□ 0.47
HDHD3-201ENST00000238379 ATF5Q9Y2D1 282 aaPredicted RBP17.96■□□□□ 0.47
HDHD3-201ENST00000238379 SUGT1Q9Y2Z0 365 aa17.96■□□□□ 0.47
HDHD3-201ENST00000238379 KIF13BQ9NQT8 1826 aa17.96■□□□□ 0.47
HDHD3-201ENST00000238379 C21orf2O43822 256 aa17.95■□□□□ 0.46
HDHD3-201ENST00000238379 BAG3O95817 575 aa17.95■□□□□ 0.46
HDHD3-201ENST00000238379 CTR9Q6PD62 1173 aa17.95■□□□□ 0.46
HDHD3-201ENST00000238379 CERS5Q8N5B7 392 aa17.95■□□□□ 0.46
HDHD3-201ENST00000238379 ZNF274Q96GC6 653 aaPredicted RBP17.95■□□□□ 0.46
HDHD3-201ENST00000238379 GPR75-ASB3A0A0A6YYF3 556 aa17.95■□□□□ 0.46
HDHD3-201ENST00000238379 MINDY4BA8MYZ0 360 aa17.95■□□□□ 0.46
HDHD3-201ENST00000238379 G3V3G9 751 aa17.95■□□□□ 0.46
HDHD3-201ENST00000238379 SMIM22K7EJ46 135 aa17.95■□□□□ 0.46
HDHD3-201ENST00000238379 PFKFB2O60825 505 aa17.95■□□□□ 0.46
HDHD3-201ENST00000238379 BRD1O95696 1058 aa17.95■□□□□ 0.46
HDHD3-201ENST00000238379 GJB2P29033 226 aa17.95■□□□□ 0.46
HDHD3-201ENST00000238379 MCM4P33991 863 aa17.95■□□□□ 0.46
HDHD3-201ENST00000238379 R3HDM1Q15032 1099 aaKnown RBP17.95■□□□□ 0.46
HDHD3-201ENST00000238379 DCAF8Q5TAQ9 597 aa17.95■□□□□ 0.46
HDHD3-201ENST00000238379 SH3RF3Q8TEJ3 882 aaPredicted RBP17.95■□□□□ 0.46
HDHD3-201ENST00000238379 KRT23Q9C075 422 aa17.95■□□□□ 0.46
HDHD3-201ENST00000238379 DBNDD1Q9H9R9 158 aa17.95■□□□□ 0.46
HDHD3-201ENST00000238379 ZSWIM5Q9P217 1185 aa17.95■□□□□ 0.46
HDHD3-201ENST00000238379 MKRN1Q9UHC7 482 aaKnown RBP17.95■□□□□ 0.46
HDHD3-201ENST00000238379 MYH2Q9UKX2 1941 aa17.94■□□□□ 0.46
HDHD3-201ENST00000238379 GAKO14976 1311 aa17.94■□□□□ 0.46
HDHD3-201ENST00000238379 USP17L12C9JPN9 530 aa17.94■□□□□ 0.46
HDHD3-201ENST00000238379 USP17L21D6R901 530 aa17.94■□□□□ 0.46
HDHD3-201ENST00000238379 DTNBO60941 627 aa17.94■□□□□ 0.46
HDHD3-201ENST00000238379 PDIA3P30101 505 aaKnown RBP17.94■□□□□ 0.46
HDHD3-201ENST00000238379 SCRN1Q12765 414 aa17.94■□□□□ 0.46
HDHD3-201ENST00000238379 SLF2Q8IX21 1173 aa17.94■□□□□ 0.46
HDHD3-201ENST00000238379 RNF41Q9H4P4 317 aaPredicted RBP17.94■□□□□ 0.46
HDHD3-201ENST00000238379 BAZ2AQ9UIF9 1905 aaKnown RBP17.94■□□□□ 0.46
HDHD3-201ENST00000238379 CYP2D7A0A087X1C5 515 aa17.93■□□□□ 0.46
HDHD3-201ENST00000238379 KDM4AO75164 1064 aa17.93■□□□□ 0.46
HDHD3-201ENST00000238379 POLD1P28340 1107 aa17.93■□□□□ 0.46
HDHD3-201ENST00000238379 GRIPAP1Q4V328 841 aa17.93■□□□□ 0.46
HDHD3-201ENST00000238379 SBK1Q52WX2 424 aa17.93■□□□□ 0.46
HDHD3-201ENST00000238379 CERS3Q8IU89 383 aa17.93■□□□□ 0.46
HDHD3-201ENST00000238379 TMEM87BQ96K49 555 aa17.93■□□□□ 0.46
HDHD3-201ENST00000238379 NOL10Q9BSC4 688 aaKnown RBP17.93■□□□□ 0.46
HDHD3-201ENST00000238379 BRPF3Q9ULD4 1205 aa17.93■□□□□ 0.46
HDHD3-201ENST00000238379 FGRP09769 529 aa17.93■□□□□ 0.46
HDHD3-201ENST00000238379 BTDP43251 543 aa17.93■□□□□ 0.46
HDHD3-201ENST00000238379 TGFB2P61812 414 aa17.93■□□□□ 0.46
HDHD3-201ENST00000238379 KIAA2012Q0VF49 1180 aa17.93■□□□□ 0.46
HDHD3-201ENST00000238379 SUPT20HQ8NEM7 779 aa17.93■□□□□ 0.46
HDHD3-201ENST00000238379 IGDCC4Q8TDY8 1250 aa17.93■□□□□ 0.46
HDHD3-201ENST00000238379 FBXW7Q969H0 707 aa17.93■□□□□ 0.46
HDHD3-201ENST00000238379 GBP4Q96PP9 640 aa17.93■□□□□ 0.46
HDHD3-201ENST00000238379 KCNQ5Q9NR82 932 aa17.93■□□□□ 0.46
HDHD3-201ENST00000238379 ANGEL1Q9UNK9 670 aaKnown RBP17.93■□□□□ 0.46
HDHD3-201ENST00000238379 SH2B2O14492 632 aaPredicted RBP17.92■□□□□ 0.46
HDHD3-201ENST00000238379 SYT1P21579 422 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms