RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 CIAO1O76071 339 aa17.85■□□□□ 0.45
DDX55-201ENST00000238146 TBC1D8O95759 1140 aa17.85■□□□□ 0.45
DDX55-201ENST00000238146 LONRF3Q496Y0 759 aa17.85■□□□□ 0.45
DDX55-201ENST00000238146 KRT40Q6A162 431 aa17.85■□□□□ 0.45
DDX55-201ENST00000238146 OLFM4Q6UX06 510 aa17.85■□□□□ 0.45
DDX55-201ENST00000238146 RGS22Q8NE09 1264 aa17.85■□□□□ 0.45
DDX55-201ENST00000238146 DCAF5Q96JK2 942 aa17.85■□□□□ 0.45
DDX55-201ENST00000238146 WDR24Q96S15 920 aa17.85■□□□□ 0.45
DDX55-201ENST00000238146 MAP3K14Q99558 947 aa17.85■□□□□ 0.45
DDX55-201ENST00000238146 ZNF213O14771 459 aa17.85■□□□□ 0.45
DDX55-201ENST00000238146 MYO1BO43795 1136 aa17.85■□□□□ 0.45
DDX55-201ENST00000238146 ZFYP08048 801 aaPredicted RBP17.85■□□□□ 0.45
DDX55-201ENST00000238146 MAP3K9P80192 1104 aa17.85■□□□□ 0.45
DDX55-201ENST00000238146 PDE4BQ07343 736 aa17.85■□□□□ 0.45
DDX55-201ENST00000238146 TTLL7Q6ZT98 887 aa17.85■□□□□ 0.45
DDX55-201ENST00000238146 C19orf44Q9H6X5 657 aa17.85■□□□□ 0.45
DDX55-201ENST00000238146 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.85■□□□□ 0.451e-6■■■□□ 17.8
DDX55-201ENST00000238146 PCDHA5Q9Y5H7 936 aa17.85■□□□□ 0.45
DDX55-201ENST00000238146 CYP27B1O15528 508 aa17.85■□□□□ 0.45
DDX55-201ENST00000238146 BMP6P22004 513 aa17.85■□□□□ 0.45
DDX55-201ENST00000238146 CDC27P30260 824 aa17.85■□□□□ 0.45
DDX55-201ENST00000238146 ADORA1P30542 326 aa17.85■□□□□ 0.45
DDX55-201ENST00000238146 TBX2Q13207 712 aaPredicted RBP17.85■□□□□ 0.45
DDX55-201ENST00000238146 TEX35Q5T0J7 233 aa17.85■□□□□ 0.45
DDX55-201ENST00000238146 BBXQ8WY36 941 aaPredicted RBP17.85■□□□□ 0.45
DDX55-201ENST00000238146 CEP126Q9P2H0 1117 aa17.85■□□□□ 0.45
DDX55-201ENST00000238146 MEGF6O75095 1541 aa17.84■□□□□ 0.45
DDX55-201ENST00000238146 CPDO75976 1380 aa17.84■□□□□ 0.45
DDX55-201ENST00000238146 WDR19Q8NEZ3 1342 aa17.84■□□□□ 0.45
DDX55-201ENST00000238146 GTF2E1P29083 439 aaPredicted RBP17.84■□□□□ 0.45
DDX55-201ENST00000238146 CC2D1AQ6P1N0 951 aaPredicted RBP17.84■□□□□ 0.45
DDX55-201ENST00000238146 APPBP2Q92624 585 aa17.84■□□□□ 0.45
DDX55-201ENST00000238146 BAG1Q99933 345 aaPredicted RBP17.84■□□□□ 0.45
DDX55-201ENST00000238146 DENND2AQ9ULE3 1009 aa17.84■□□□□ 0.45
DDX55-201ENST00000238146 ZMYM6O95789 1325 aa17.84■□□□□ 0.45
DDX55-201ENST00000238146 TULP2O00295 520 aa17.84■□□□□ 0.45
DDX55-201ENST00000238146 CASQ1P31415 396 aa17.84■□□□□ 0.45
DDX55-201ENST00000238146 GNG11P61952 73 aa17.84■□□□□ 0.45
DDX55-201ENST00000238146 SCARF1Q14162 830 aa17.84■□□□□ 0.45
DDX55-201ENST00000238146 TTC39AQ5SRH9 613 aa17.84■□□□□ 0.45
DDX55-201ENST00000238146 CCDC102BQ68D86 513 aa17.84■□□□□ 0.45
DDX55-201ENST00000238146 KRBA2Q6ZNG9 492 aa17.84■□□□□ 0.45
DDX55-201ENST00000238146 GPR161Q8N6U8 529 aaKnown RBP17.84■□□□□ 0.45
DDX55-201ENST00000238146 NKX2-3Q8TAU0 364 aa17.84■□□□□ 0.45
DDX55-201ENST00000238146 ATG3Q9NT62 314 aa17.84■□□□□ 0.45
DDX55-201ENST00000238146 HSP90AA4PQ58FG1 418 aa17.83■□□□□ 0.44
DDX55-201ENST00000238146 TAOK2Q9UL54 1235 aa17.83■□□□□ 0.44
DDX55-201ENST00000238146 RXRAP19793 462 aa17.83■□□□□ 0.44
DDX55-201ENST00000238146 RSRC2Q7L4I2 434 aaKnown RBP17.83■□□□□ 0.44
DDX55-201ENST00000238146 KRT28Q7Z3Y7 464 aa17.83■□□□□ 0.44
DDX55-201ENST00000238146 CNNM3Q8NE01 707 aa17.83■□□□□ 0.44
DDX55-201ENST00000238146 XAGE2Q96GT9 111 aa17.83■□□□□ 0.44
DDX55-201ENST00000238146 NBPF3Q9H094 633 aa17.83■□□□□ 0.44
DDX55-201ENST00000238146 ZCCHC17Q9NP64 241 aaKnown RBP17.83■□□□□ 0.44
DDX55-201ENST00000238146 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.83■□□□□ 0.44
DDX55-201ENST00000238146 KCNH3Q9ULD8 1083 aa17.83■□□□□ 0.44
DDX55-201ENST00000238146 MRFAP1Q9Y605 127 aa17.83■□□□□ 0.44
DDX55-201ENST00000238146 C4AP0C0L4 1744 aa17.82■□□□□ 0.44
DDX55-201ENST00000238146 C4BP0C0L5 1744 aa17.82■□□□□ 0.44
DDX55-201ENST00000238146 GOLGA6L9A6NEM1 432 aa17.82■□□□□ 0.44
DDX55-201ENST00000238146 FOXN1O15353 648 aa17.82■□□□□ 0.44
DDX55-201ENST00000238146 GPAA1O43292 621 aa17.82■□□□□ 0.44
DDX55-201ENST00000238146 STX10O60499 249 aa17.82■□□□□ 0.44
DDX55-201ENST00000238146 ZAP70P43403 619 aa17.82■□□□□ 0.44
DDX55-201ENST00000238146 METAP2P50579 478 aaKnown RBP eCLIP17.82■□□□□ 0.44
DDX55-201ENST00000238146 TOGARAM2Q6ZUX3 1019 aa17.82■□□□□ 0.44
DDX55-201ENST00000238146 TC2NQ8N9U0 490 aa17.82■□□□□ 0.44
DDX55-201ENST00000238146 PHKBQ93100 1093 aa17.82■□□□□ 0.44
DDX55-201ENST00000238146 ANGEL1Q9UNK9 670 aaKnown RBP17.82■□□□□ 0.44
DDX55-201ENST00000238146 CUTAO60888 179 aa17.82■□□□□ 0.44
DDX55-201ENST00000238146 PPP2R3AQ06190 1150 aa17.82■□□□□ 0.44
DDX55-201ENST00000238146 GNL2Q13823 731 aaKnown RBP17.82■□□□□ 0.44
DDX55-201ENST00000238146 PDILTQ8N807 584 aa17.82■□□□□ 0.44
DDX55-201ENST00000238146 NEK11Q8NG66 645 aa17.82■□□□□ 0.44
DDX55-201ENST00000238146 DDX60Q8IY21 1712 aaKnown RBP17.82■□□□□ 0.44
DDX55-201ENST00000238146 CABP4P57796 275 aa17.81■□□□□ 0.44
DDX55-201ENST00000238146 ST5P78524 1137 aa17.81■□□□□ 0.44
DDX55-201ENST00000238146 MDM2Q00987 491 aaPredicted RBP17.81■□□□□ 0.44
DDX55-201ENST00000238146 KIFC2Q96AC6 838 aa17.81■□□□□ 0.44
DDX55-201ENST00000238146 CAPN2P17655 700 aa17.81■□□□□ 0.44
DDX55-201ENST00000238146 OAS2P29728 719 aaKnown RBP17.81■□□□□ 0.44
DDX55-201ENST00000238146 ADKP55263 362 aaKnown RBP17.81■□□□□ 0.44
DDX55-201ENST00000238146 PI16Q6UXB8 463 aa17.81■□□□□ 0.44
DDX55-201ENST00000238146 CYB5R4Q7L1T6 521 aa17.81■□□□□ 0.44
DDX55-201ENST00000238146 CCDC191Q8NCU4 936 aa17.81■□□□□ 0.44
DDX55-201ENST00000238146 FER1L4A9Z1Z3 1794 aa17.8■□□□□ 0.44
DDX55-201ENST00000238146 CDKL5O76039 1030 aa17.8■□□□□ 0.44
DDX55-201ENST00000238146 TRDNQ13061 729 aa17.8■□□□□ 0.44
DDX55-201ENST00000238146 SMC1AQ14683 1233 aaKnown RBP17.8■□□□□ 0.44
DDX55-201ENST00000238146 ANKLE2Q86XL3 938 aa17.8■□□□□ 0.44
DDX55-201ENST00000238146 SMARCE1Q969G3 411 aa17.8■□□□□ 0.44
DDX55-201ENST00000238146 PARD6BQ9BYG5 372 aa17.8■□□□□ 0.44
DDX55-201ENST00000238146 SH2B2O14492 632 aaPredicted RBP17.8■□□□□ 0.44
DDX55-201ENST00000238146 SPECC1LQ69YQ0 1117 aa17.8■□□□□ 0.44
DDX55-201ENST00000238146 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.8■□□□□ 0.44
DDX55-201ENST00000238146 ZBTB3Q9H5J0 574 aa17.8■□□□□ 0.44
DDX55-201ENST00000238146 SENP2Q9HC62 589 aa17.8■□□□□ 0.44
DDX55-201ENST00000238146 ZNF18P17022 549 aa17.79■□□□□ 0.44
DDX55-201ENST00000238146 FMR1Q06787 632 aaKnown RBP eCLIP17.79■□□□□ 0.44
DDX55-201ENST00000238146 APOA5Q6Q788 366 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms