RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 DACT1Q9NYF0 836 aa22.41■■□□□ 1.18
YBX3-201ENST00000228251 LRP2BPQ9P2M1 347 aa22.41■■□□□ 1.18
YBX3-201ENST00000228251 ORC3Q9UBD5 711 aaPredicted RBP22.41■■□□□ 1.18
YBX3-201ENST00000228251 ZPR1O75312 459 aa22.4■■□□□ 1.18
YBX3-201ENST00000228251 FOSBP53539 338 aa22.4■■□□□ 1.18
YBX3-201ENST00000228251 CTDSPL2Q05D32 466 aa22.4■■□□□ 1.18
YBX3-201ENST00000228251 NBPF5PQ86XG9 351 aaPredicted RBP22.4■■□□□ 1.18
YBX3-201ENST00000228251 ZNF384Q8TF68 577 aa22.4■■□□□ 1.18
YBX3-201ENST00000228251 NLRP3Q96P20 1036 aa22.4■■□□□ 1.18
YBX3-201ENST00000228251 RIOK1Q9BRS2 568 aaKnown RBP22.4■■□□□ 1.18
YBX3-201ENST00000228251 FTOQ9C0B1 505 aaKnown RBP eCLIP22.4■■□□□ 1.18
YBX3-201ENST00000228251 CLSTN2Q9H4D0 955 aa22.4■■□□□ 1.18
YBX3-201ENST00000228251 CNNM2Q9H8M5 875 aa22.4■■□□□ 1.18
YBX3-201ENST00000228251 ZSWIM5Q9P217 1185 aa22.4■■□□□ 1.18
YBX3-201ENST00000228251 IQSEC3Q9UPP2 1182 aaPredicted RBP22.4■■□□□ 1.18
YBX3-201ENST00000228251 SLC4A4Q9Y6R1 1079 aa22.4■■□□□ 1.18
YBX3-201ENST00000228251 BAZ2AQ9UIF9 1905 aaKnown RBP22.4■■□□□ 1.18
YBX3-201ENST00000228251 DLEC1Q9Y238 1755 aa22.4■■□□□ 1.18
YBX3-201ENST00000228251 SEMA3EO15041 775 aa22.4■■□□□ 1.18
YBX3-201ENST00000228251 CYP7A1P22680 504 aa22.4■■□□□ 1.18
YBX3-201ENST00000228251 GUCY1B3Q02153 619 aa22.4■■□□□ 1.18
YBX3-201ENST00000228251 NTRK3Q16288 839 aa22.4■■□□□ 1.18
YBX3-201ENST00000228251 RAB11FIP4Q86YS3 637 aa22.4■■□□□ 1.18
YBX3-201ENST00000228251 FAM217BQ9NTX9 383 aaPredicted RBP22.4■■□□□ 1.18
YBX3-201ENST00000228251 CCDC88AQ3V6T2 1871 aa22.4■■□□□ 1.18
YBX3-201ENST00000228251 GTF2E1P29083 439 aaPredicted RBP22.39■■□□□ 1.17
YBX3-201ENST00000228251 TPTE2Q6XPS3 522 aa22.39■■□□□ 1.17
YBX3-201ENST00000228251 ZNF396Q96N95 335 aaPredicted RBP22.39■■□□□ 1.17
YBX3-201ENST00000228251 MTA3Q9BTC8 594 aa22.39■■□□□ 1.17
YBX3-201ENST00000228251 ANAPC4Q9UJX5 808 aa22.39■■□□□ 1.17
YBX3-201ENST00000228251 LAMB1P07942 1786 aa22.38■■□□□ 1.17
YBX3-201ENST00000228251 NR1I2O75469 434 aa22.38■■□□□ 1.17
YBX3-201ENST00000228251 KLRK1P26718 216 aa22.38■■□□□ 1.17
YBX3-201ENST00000228251 CDC27P30260 824 aa22.38■■□□□ 1.17
YBX3-201ENST00000228251 MAP3K11Q16584 847 aa22.38■■□□□ 1.17
YBX3-201ENST00000228251 CAVIN4Q5BKX8 364 aa22.38■■□□□ 1.17
YBX3-201ENST00000228251 ZSCAN30Q86W11 494 aa22.38■■□□□ 1.17
YBX3-201ENST00000228251 MIGA1Q8NAN2 632 aa22.38■■□□□ 1.17
YBX3-201ENST00000228251 C8orf76Q96K31 380 aa22.38■■□□□ 1.17
YBX3-201ENST00000228251 NACAP1Q9BZK3 213 aa22.38■■□□□ 1.17
YBX3-201ENST00000228251 KRT23Q9C075 422 aa22.38■■□□□ 1.17
YBX3-201ENST00000228251 DUOX1Q9NRD9 1551 aa22.38■■□□□ 1.17
YBX3-201ENST00000228251 GOLGA6L4A6NEF3 574 aa22.38■■□□□ 1.17
YBX3-201ENST00000228251 METAP2P50579 478 aaKnown RBP eCLIP22.38■■□□□ 1.179e-10■■■■□ 20.1
YBX3-201ENST00000228251 RTEL1Q9NZ71 1219 aa22.38■■□□□ 1.17
YBX3-201ENST00000228251 CPLX1O14810 134 aa22.37■■□□□ 1.17
YBX3-201ENST00000228251 KDM4AO75164 1064 aa22.37■■□□□ 1.17
YBX3-201ENST00000228251 OTUD7BQ6GQQ9 843 aa22.37■■□□□ 1.17
YBX3-201ENST00000228251 ANKRD2Q9GZV1 360 aa22.37■■□□□ 1.17
YBX3-201ENST00000228251 AFF2P51816 1311 aa22.37■■□□□ 1.17
YBX3-201ENST00000228251 MYH2Q9UKX2 1941 aa22.37■■□□□ 1.17
YBX3-201ENST00000228251 CCDC192P0DO97 292 aa22.36■■□□□ 1.17
YBX3-201ENST00000228251 TMEM67Q5HYA8 995 aa22.36■■□□□ 1.17
YBX3-201ENST00000228251 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.36■■□□□ 1.17
YBX3-201ENST00000228251 MAGEB6P1A0A0J9YX57 407 aa22.35■■□□□ 1.17
YBX3-201ENST00000228251 ZBTB43O43298 467 aa22.35■■□□□ 1.17
YBX3-201ENST00000228251 TDO2P48775 406 aa22.35■■□□□ 1.17
YBX3-201ENST00000228251 MFSD6Q6ZSS7 791 aa22.35■■□□□ 1.17
YBX3-201ENST00000228251 BRAPQ7Z569 592 aa22.35■■□□□ 1.17
YBX3-201ENST00000228251 ABCF2Q9UG63 623 aa22.35■■□□□ 1.17
YBX3-201ENST00000228251 NOL7Q9UMY1 257 aaKnown RBP22.35■■□□□ 1.17
YBX3-201ENST00000228251 MRVI1Q9Y6F6 885 aa22.35■■□□□ 1.17
YBX3-201ENST00000228251 KIF23Q02241 960 aaPredicted RBP22.35■■□□□ 1.17
YBX3-201ENST00000228251 ENGASEQ8NFI3 743 aa22.35■■□□□ 1.17
YBX3-201ENST00000228251 BICD2Q8TD16 824 aa22.35■■□□□ 1.17
YBX3-201ENST00000228251 TNMDQ9H2S6 317 aa22.35■■□□□ 1.17
YBX3-201ENST00000228251 LRRC4BQ9NT99 713 aa22.35■■□□□ 1.17
YBX3-201ENST00000228251 GJB4Q9NTQ9 266 aa22.35■■□□□ 1.17
YBX3-201ENST00000228251 STK36Q9NRP7 1315 aa22.34■■□□□ 1.17
YBX3-201ENST00000228251 KIF28PB7ZC32 967 aa22.34■■□□□ 1.17
YBX3-201ENST00000228251 RANBP6O60518 1105 aaKnown RBP22.34■■□□□ 1.17
YBX3-201ENST00000228251 CDKL5O76039 1030 aa22.34■■□□□ 1.17
YBX3-201ENST00000228251 HSPA1LP34931 641 aa22.34■■□□□ 1.17
YBX3-201ENST00000228251 TYRO3Q06418 890 aa22.34■■□□□ 1.17
YBX3-201ENST00000228251 PPARAQ07869 468 aa22.34■■□□□ 1.17
YBX3-201ENST00000228251 CAMK4Q16566 473 aa22.34■■□□□ 1.17
YBX3-201ENST00000228251 GOLPH3LQ9H4A5 285 aa22.34■■□□□ 1.17
YBX3-201ENST00000228251 RAI14Q9P0K7 980 aa22.34■■□□□ 1.17
YBX3-201ENST00000228251 BRWD3Q6RI45 1802 aa22.34■■□□□ 1.17
YBX3-201ENST00000228251 CEBPZQ03701 1054 aaKnown RBP22.33■■□□□ 1.17
YBX3-201ENST00000228251 SNW1Q13573 536 aaKnown RBP22.33■■□□□ 1.17
YBX3-201ENST00000228251 CCDC24Q8N4L8 307 aa22.33■■□□□ 1.17
YBX3-201ENST00000228251 BRIP1Q9BX63 1249 aa22.33■■□□□ 1.17
YBX3-201ENST00000228251 BCL11BQ9C0K0 894 aaPredicted RBP22.33■■□□□ 1.17
YBX3-201ENST00000228251 POLR3EQ9NVU0 708 aa22.33■■□□□ 1.17
YBX3-201ENST00000228251 IFIT3O14879 490 aaKnown RBP22.33■■□□□ 1.16
YBX3-201ENST00000228251 RXRAP19793 462 aa22.33■■□□□ 1.16
YBX3-201ENST00000228251 RCAN1P53805 252 aa22.33■■□□□ 1.16
YBX3-201ENST00000228251 NFIXQ14938 502 aa22.33■■□□□ 1.16
YBX3-201ENST00000228251 MYSM1Q5VVJ2 828 aa22.33■■□□□ 1.16
YBX3-201ENST00000228251 FAM196AQ6ZSG2 479 aa22.33■■□□□ 1.16
YBX3-201ENST00000228251 MICU3Q86XE3 530 aa22.33■■□□□ 1.16
YBX3-201ENST00000228251 LINC00301Q8NCQ3 95 aa22.33■■□□□ 1.16
YBX3-201ENST00000228251 SDR42E1Q8WUS8 393 aa22.33■■□□□ 1.16
YBX3-201ENST00000228251 NSUN4Q96CB9 384 aaKnown RBP22.33■■□□□ 1.16
YBX3-201ENST00000228251 RNF41Q9H4P4 317 aaPredicted RBP22.33■■□□□ 1.16
YBX3-201ENST00000228251 GOLGA8AA7E2F4 631 aa22.32■■□□□ 1.16
YBX3-201ENST00000228251 YEATS4O95619 227 aa22.32■■□□□ 1.16
YBX3-201ENST00000228251 FGRP09769 529 aa22.32■■□□□ 1.16
YBX3-201ENST00000228251 ADRA2BP18089 450 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms