RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 MROH7-TTC4A0A0A0MT08 1334 aa28.64■■■□□ 2.18
HOMER3-201ENST00000221222 LDHCP07864 332 aa28.63■■■□□ 2.17
HOMER3-201ENST00000221222 MAP4K4O95819 1239 aaPredicted RBP28.62■■■□□ 2.17
HOMER3-201ENST00000221222 VEGFBP49765 207 aa28.62■■■□□ 2.17
HOMER3-201ENST00000221222 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.62■■■□□ 2.17
HOMER3-201ENST00000221222 ASTN2O75129 1339 aaPredicted RBP28.62■■■□□ 2.17
HOMER3-201ENST00000221222 POLR2AP24928 1970 aaKnown RBP28.61■■■□□ 2.17
HOMER3-201ENST00000221222 PITPNM2Q9BZ72 1349 aa28.61■■■□□ 2.17
HOMER3-201ENST00000221222 GPR75-ASB3A0A0A6YYF3 556 aa28.61■■■□□ 2.17
HOMER3-201ENST00000221222 MYO1BO43795 1136 aa28.61■■■□□ 2.17
HOMER3-201ENST00000221222 SLC9C2Q5TAH2 1124 aa28.61■■■□□ 2.17
HOMER3-201ENST00000221222 MAGEB6Q8N7X4 407 aa28.61■■■□□ 2.17
HOMER3-201ENST00000221222 ABT1Q9ULW3 272 aaKnown RBP28.61■■■□□ 2.17
HOMER3-201ENST00000221222 AK9Q5TCS8 1911 aa28.6■■■□□ 2.17
HOMER3-201ENST00000221222 TRAF5O00463 557 aa28.6■■■□□ 2.17
HOMER3-201ENST00000221222 PDE6AP16499 860 aa28.6■■■□□ 2.17
HOMER3-201ENST00000221222 TNS4Q8IZW8 715 aa28.6■■■□□ 2.17
HOMER3-201ENST00000221222 EVI5LQ96CN4 794 aa28.6■■■□□ 2.17
HOMER3-201ENST00000221222 GGA3Q9NZ52 723 aa28.6■■■□□ 2.17
HOMER3-201ENST00000221222 CYP7A1P22680 504 aa28.59■■■□□ 2.17
HOMER3-201ENST00000221222 ADD2P35612 726 aa28.59■■■□□ 2.17
HOMER3-201ENST00000221222 SPDYE2Q495Y8 402 aa28.59■■■□□ 2.17
HOMER3-201ENST00000221222 TTC22Q5TAA0 569 aa28.59■■■□□ 2.17
HOMER3-201ENST00000221222 ANGEL2Q5VTE6 544 aaKnown RBP28.59■■■□□ 2.17
HOMER3-201ENST00000221222 ZSCAN25Q6NSZ9 544 aa28.59■■■□□ 2.17
HOMER3-201ENST00000221222 ADGRA1Q86SQ6 560 aa28.59■■■□□ 2.17
HOMER3-201ENST00000221222 TDRD3Q9H7E2 651 aaKnown RBP28.59■■■□□ 2.17
HOMER3-201ENST00000221222 TCRBV5S4A2TA0A5A2 114 aa28.58■■■□□ 2.17
HOMER3-201ENST00000221222 ZNF70Q9UC06 446 aaPredicted RBP28.58■■■□□ 2.17
HOMER3-201ENST00000221222 BTDP43251 543 aa28.57■■■□□ 2.16
HOMER3-201ENST00000221222 TICAM2Q86XR7 235 aa28.57■■■□□ 2.16
HOMER3-201ENST00000221222 DCPSQ96C86 337 aaKnown RBP28.57■■■□□ 2.16
HOMER3-201ENST00000221222 TRPM7Q96QT4 1865 aa28.56■■■□□ 2.16
HOMER3-201ENST00000221222 ZNF532Q9HCE3 1301 aa28.56■■■□□ 2.16
HOMER3-201ENST00000221222 CAPN15O75808 1086 aa28.56■■■□□ 2.16
HOMER3-201ENST00000221222 ZFYP08048 801 aaPredicted RBP28.56■■■□□ 2.16
HOMER3-201ENST00000221222 UBE3CQ15386 1083 aa28.56■■■□□ 2.16
HOMER3-201ENST00000221222 DEFB115Q30KQ5 88 aa28.56■■■□□ 2.16
HOMER3-201ENST00000221222 LRRFIP1Q32MZ4 808 aaKnown RBP28.56■■■□□ 2.16
HOMER3-201ENST00000221222 CDC42EP5Q6NZY7 148 aa28.56■■■□□ 2.16
HOMER3-201ENST00000221222 SKAP1Q86WV1 359 aa28.56■■■□□ 2.16
HOMER3-201ENST00000221222 FSD1Q9BTV5 496 aa28.56■■■□□ 2.16
HOMER3-201ENST00000221222 CLRN2A0PK11 232 aa28.55■■■□□ 2.16
HOMER3-201ENST00000221222 GSPT1P15170 499 aaKnown RBP28.55■■■□□ 2.16
HOMER3-201ENST00000221222 PPP4CP60510 307 aa28.55■■■□□ 2.16
HOMER3-201ENST00000221222 APOBEC3FQ8IUX4 373 aaKnown RBP28.55■■■□□ 2.16
HOMER3-201ENST00000221222 RFX7Q2KHR2 1363 aa28.55■■■□□ 2.16
HOMER3-201ENST00000221222 RASSF10A6NK89 507 aa28.54■■■□□ 2.16
HOMER3-201ENST00000221222 TRIM6-TRIM34B2RNG4 842 aa28.54■■■□□ 2.16
HOMER3-201ENST00000221222 FOXN1O15353 648 aa28.54■■■□□ 2.16
HOMER3-201ENST00000221222 BAG3O95817 575 aa28.54■■■□□ 2.16
HOMER3-201ENST00000221222 FKBP1CQ5VVH2 108 aa28.54■■■□□ 2.16
HOMER3-201ENST00000221222 NOL10Q9BSC4 688 aaKnown RBP28.54■■■□□ 2.16
HOMER3-201ENST00000221222 USP40Q9NVE5 1235 aa28.54■■■□□ 2.16
HOMER3-201ENST00000221222 RNF113AO15541 343 aaKnown RBP28.53■■■□□ 2.16
HOMER3-201ENST00000221222 RHBDL3P58872 404 aa28.53■■■□□ 2.16
HOMER3-201ENST00000221222 PAXIP1Q6ZW49 1069 aaPredicted RBP28.53■■■□□ 2.16
HOMER3-201ENST00000221222 CERS3Q8IU89 383 aa28.53■■■□□ 2.16
HOMER3-201ENST00000221222 CDK5RAP2Q96SN8 1893 aa28.53■■■□□ 2.16
HOMER3-201ENST00000221222 CHGBP05060 677 aa28.52■■■□□ 2.16
HOMER3-201ENST00000221222 PLCG2P16885 1265 aa28.52■■■□□ 2.16
HOMER3-201ENST00000221222 CDC37L1Q7L3B6 337 aa28.52■■■□□ 2.16
HOMER3-201ENST00000221222 KRT26Q7Z3Y9 468 aa28.52■■■□□ 2.16
HOMER3-201ENST00000221222 RILPL2Q969X0 211 aa28.52■■■□□ 2.16
HOMER3-201ENST00000221222 GLIS2Q9BZE0 524 aaPredicted RBP28.52■■■□□ 2.16
HOMER3-201ENST00000221222 AATFQ9NY61 560 aaKnown RBP eCLIP28.52■■■□□ 2.16
HOMER3-201ENST00000221222 TMOD2Q9NZR1 351 aa28.52■■■□□ 2.16
HOMER3-201ENST00000221222 FOCADQ5VW36 1801 aa28.52■■■□□ 2.16
HOMER3-201ENST00000221222 GRM1Q13255 1194 aa28.51■■■□□ 2.16
HOMER3-201ENST00000221222 SULF1Q8IWU6 871 aa28.51■■■□□ 2.16
HOMER3-201ENST00000221222 VEZTQ9HBM0 779 aa28.51■■■□□ 2.16
HOMER3-201ENST00000221222 RGS3P49796 1198 aa28.5■■■□□ 2.15
HOMER3-201ENST00000221222 TNFAIP1Q13829 316 aa28.5■■■□□ 2.15
HOMER3-201ENST00000221222 SLFNL1Q499Z3 407 aa28.5■■■□□ 2.15
HOMER3-201ENST00000221222 CST9Q5W186 159 aa28.5■■■□□ 2.15
HOMER3-201ENST00000221222 MIGA1Q8NAN2 632 aa28.5■■■□□ 2.15
HOMER3-201ENST00000221222 AIDAQ96BJ3 306 aa28.5■■■□□ 2.15
HOMER3-201ENST00000221222 RIOK1Q9BRS2 568 aaKnown RBP28.5■■■□□ 2.15
HOMER3-201ENST00000221222 WDR33Q9C0J8 1336 aaKnown RBP28.5■■■□□ 2.15
HOMER3-201ENST00000221222 SDSP20132 328 aa28.5■■■□□ 2.15
HOMER3-201ENST00000221222 APPBP2Q92624 585 aa28.5■■■□□ 2.15
HOMER3-201ENST00000221222 IDI2Q9BXS1 227 aa28.5■■■□□ 2.15
HOMER3-201ENST00000221222 CACNB3P54284 484 aa28.49■■■□□ 2.15
HOMER3-201ENST00000221222 DYNLL1P63167 89 aaKnown RBP28.49■■■□□ 2.15
HOMER3-201ENST00000221222 USP48Q86UV5 1035 aa28.49■■■□□ 2.15
HOMER3-201ENST00000221222 FAM83AQ86UY5 434 aa28.49■■■□□ 2.15
HOMER3-201ENST00000221222 SH3RF3Q8TEJ3 882 aaPredicted RBP28.49■■■□□ 2.15
HOMER3-201ENST00000221222 MAGEB6P1A0A0J9YX57 407 aa28.48■■■□□ 2.15
HOMER3-201ENST00000221222 ADM5C9JUS6 153 aa28.48■■■□□ 2.15
HOMER3-201ENST00000221222 WDHD1O75717 1129 aaPredicted RBP28.48■■■□□ 2.15
HOMER3-201ENST00000221222 DEFB129Q9H1M3 183 aa28.48■■■□□ 2.15
HOMER3-201ENST00000221222 SCAF8Q9UPN6 1271 aaKnown RBP28.48■■■□□ 2.15
HOMER3-201ENST00000221222 PPP2R3BQ9Y5P8 575 aa28.48■■■□□ 2.15
HOMER3-201ENST00000221222 TCP10L2B9ZVM9 353 aa28.47■■■□□ 2.15
HOMER3-201ENST00000221222 NPM3O75607 178 aaKnown RBP28.47■■■□□ 2.15
HOMER3-201ENST00000221222 TNNI2P48788 182 aa28.47■■■□□ 2.15
HOMER3-201ENST00000221222 NFIAQ12857 509 aa28.47■■■□□ 2.15
HOMER3-201ENST00000221222 ZMYM1Q5SVZ6 1142 aa28.47■■■□□ 2.15
HOMER3-201ENST00000221222 PUS7LQ9H0K6 701 aaKnown RBP28.47■■■□□ 2.15
HOMER3-201ENST00000221222 ZNF408Q9H9D4 720 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms