RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 MEX3CQ5U5Q3 659 aaKnown RBP9.64□□□□□ -0.87
VAMP3-201ENST00000054666 APOA5Q6Q788 366 aa9.64□□□□□ -0.87
VAMP3-201ENST00000054666 MIGA1Q8NAN2 632 aa9.64□□□□□ -0.87
VAMP3-201ENST00000054666 RGS22Q8NE09 1264 aa9.64□□□□□ -0.87
VAMP3-201ENST00000054666 FAM200AQ8TCP9 573 aa9.64□□□□□ -0.87
VAMP3-201ENST00000054666 PGBD1Q96JS3 809 aa9.64□□□□□ -0.87
VAMP3-201ENST00000054666 USP28Q96RU2 1077 aa9.64□□□□□ -0.87
VAMP3-201ENST00000054666 RCOR1Q9UKL0 485 aa9.64□□□□□ -0.87
VAMP3-201ENST00000054666 NOL7Q9UMY1 257 aaKnown RBP9.64□□□□□ -0.87
VAMP3-201ENST00000054666 IQSEC3Q9UPP2 1182 aaPredicted RBP9.64□□□□□ -0.87
VAMP3-201ENST00000054666 GSG1L2A8MUP6 293 aa9.63□□□□□ -0.87
VAMP3-201ENST00000054666 IFIT3O14879 490 aaKnown RBP9.63□□□□□ -0.87
VAMP3-201ENST00000054666 NR1I2O75469 434 aa9.63□□□□□ -0.87
VAMP3-201ENST00000054666 GYG1P46976 350 aa9.63□□□□□ -0.87
VAMP3-201ENST00000054666 ME1P48163 572 aa9.63□□□□□ -0.87
VAMP3-201ENST00000054666 SASS6Q6UVJ0 657 aa9.63□□□□□ -0.87
VAMP3-201ENST00000054666 TPTE2Q6XPS3 522 aa9.63□□□□□ -0.87
VAMP3-201ENST00000054666 C3orf67Q6ZVT6 689 aa9.63□□□□□ -0.87
VAMP3-201ENST00000054666 SGMS1Q86VZ5 419 aa9.63□□□□□ -0.87
VAMP3-201ENST00000054666 FBXO18Q8NFZ0 1043 aa9.63□□□□□ -0.87
VAMP3-201ENST00000054666 STAG1Q8WVM7 1258 aa9.63□□□□□ -0.87
VAMP3-201ENST00000054666 MINPP1Q9UNW1 487 aa9.63□□□□□ -0.87
VAMP3-201ENST00000054666 SLC12A7Q9Y666 1083 aa9.63□□□□□ -0.87
VAMP3-201ENST00000054666 COL4A1P02462 1669 aa9.63□□□□□ -0.87
VAMP3-201ENST00000054666 MAGEB6P1A0A0J9YX57 407 aa9.63□□□□□ -0.87
VAMP3-201ENST00000054666 SEMA3EO15041 775 aa9.63□□□□□ -0.87
VAMP3-201ENST00000054666 CTAGE5O15320 804 aa9.63□□□□□ -0.87
VAMP3-201ENST00000054666 KINO60870 393 aaKnown RBP9.63□□□□□ -0.87
VAMP3-201ENST00000054666 KDM4AO75164 1064 aa9.63□□□□□ -0.87
VAMP3-201ENST00000054666 ADD1P35611 737 aaKnown RBP9.63□□□□□ -0.87
VAMP3-201ENST00000054666 LIFRP42702 1097 aa9.63□□□□□ -0.87
VAMP3-201ENST00000054666 PLCB2Q00722 1185 aa9.63□□□□□ -0.87
VAMP3-201ENST00000054666 CTDSPL2Q05D32 466 aa9.63□□□□□ -0.87
VAMP3-201ENST00000054666 GNL2Q13823 731 aaKnown RBP9.63□□□□□ -0.87
VAMP3-201ENST00000054666 TRIM29Q14134 588 aa9.63□□□□□ -0.87
VAMP3-201ENST00000054666 STK38Q15208 465 aa9.63□□□□□ -0.87
VAMP3-201ENST00000054666 SF3A1Q15459 793 aaKnown RBP9.63□□□□□ -0.87
VAMP3-201ENST00000054666 RRP12Q5JTH9 1297 aaKnown RBP9.63□□□□□ -0.87
VAMP3-201ENST00000054666 CKAP2LQ8IYA6 745 aa9.63□□□□□ -0.87
VAMP3-201ENST00000054666 CELF1Q92879 486 aaKnown RBP9.63□□□□□ -0.87
VAMP3-201ENST00000054666 ANKRD2Q9GZV1 360 aa9.63□□□□□ -0.87
VAMP3-201ENST00000054666 BCL2L12Q9HB09 334 aa9.63□□□□□ -0.87
VAMP3-201ENST00000054666 LY9Q9HBG7 655 aa9.63□□□□□ -0.87
VAMP3-201ENST00000054666 SRP68Q9UHB9 627 aaKnown RBP9.63□□□□□ -0.87
VAMP3-201ENST00000054666 ZKSCAN5Q9Y2L8 839 aa9.63□□□□□ -0.87
VAMP3-201ENST00000054666 MYH13Q9UKX3 1938 aa9.63□□□□□ -0.87
VAMP3-201ENST00000054666 RBM43Q6ZSC3 357 aaKnown RBP9.62□□□□□ -0.87
VAMP3-201ENST00000054666 CCAR1Q8IX12 1150 aaKnown RBP9.62□□□□□ -0.87
VAMP3-201ENST00000054666 KCNG4Q8TDN1 519 aa9.62□□□□□ -0.87
VAMP3-201ENST00000054666 ALG1Q9BT22 464 aa9.62□□□□□ -0.87
VAMP3-201ENST00000054666 FTOQ9C0B1 505 aaKnown RBP eCLIP9.62□□□□□ -0.87
VAMP3-201ENST00000054666 COL1A1P02452 1464 aaPredicted RBP9.62□□□□□ -0.87
VAMP3-201ENST00000054666 PRKAB2O43741 272 aa9.62□□□□□ -0.87
VAMP3-201ENST00000054666 YEATS4O95619 227 aa9.62□□□□□ -0.87
VAMP3-201ENST00000054666 ADCY5O95622 1261 aa9.62□□□□□ -0.87
VAMP3-201ENST00000054666 RXRAP19793 462 aa9.62□□□□□ -0.87
VAMP3-201ENST00000054666 IARSP41252 1262 aaKnown RBP9.62□□□□□ -0.87
VAMP3-201ENST00000054666 RPS8P62241 208 aaKnown RBP9.62□□□□□ -0.87
VAMP3-201ENST00000054666 WASF1Q92558 559 aa9.62□□□□□ -0.87
VAMP3-201ENST00000054666 MTA3Q9BTC8 594 aa9.62□□□□□ -0.87
VAMP3-201ENST00000054666 RTEL1Q9NZ71 1219 aa9.62□□□□□ -0.87
VAMP3-201ENST00000054666 MRVI1Q9Y6F6 885 aa9.62□□□□□ -0.87
VAMP3-201ENST00000054666 LY75O60449 1722 aa9.61□□□□□ -0.87
VAMP3-201ENST00000054666 TAF1P21675 1872 aa9.61□□□□□ -0.87
VAMP3-201ENST00000054666 STK36Q9NRP7 1315 aa9.61□□□□□ -0.87
VAMP3-201ENST00000054666 CAVIN2O95810 425 aa9.61□□□□□ -0.87
VAMP3-201ENST00000054666 RFC4P35249 363 aa9.61□□□□□ -0.87
VAMP3-201ENST00000054666 FAM160A1Q05DH4 1040 aa9.61□□□□□ -0.87
VAMP3-201ENST00000054666 PPARAQ07869 468 aa9.61□□□□□ -0.87
VAMP3-201ENST00000054666 WTAPQ15007 396 aa9.61□□□□□ -0.87
VAMP3-201ENST00000054666 MYSM1Q5VVJ2 828 aa9.61□□□□□ -0.87
VAMP3-201ENST00000054666 OTUD7BQ6GQQ9 843 aa9.61□□□□□ -0.87
VAMP3-201ENST00000054666 PTF1AQ7RTS3 328 aa9.61□□□□□ -0.87
VAMP3-201ENST00000054666 ILDR1Q86SU0 546 aaPredicted RBP9.61□□□□□ -0.87
VAMP3-201ENST00000054666 TMTC2Q8N394 836 aa9.61□□□□□ -0.87
VAMP3-201ENST00000054666 FSIP1Q8NA03 581 aa9.61□□□□□ -0.87
VAMP3-201ENST00000054666 IGDCC4Q8TDY8 1250 aa9.61□□□□□ -0.87
VAMP3-201ENST00000054666 MRPS27Q92552 414 aaKnown RBP9.61□□□□□ -0.87
VAMP3-201ENST00000054666 UBAC1Q9BSL1 405 aa9.61□□□□□ -0.87
VAMP3-201ENST00000054666 POLR3EQ9NVU0 708 aa9.61□□□□□ -0.87
VAMP3-201ENST00000054666 ZSWIM5Q9P217 1185 aa9.61□□□□□ -0.87
VAMP3-201ENST00000054666 TAF1LQ8IZX4 1826 aa9.61□□□□□ -0.87
VAMP3-201ENST00000054666 NID2Q14112 1375 aa9.61□□□□□ -0.87
VAMP3-201ENST00000054666 PDS5AQ29RF7 1337 aaKnown RBP9.61□□□□□ -0.87
VAMP3-201ENST00000054666 CCDC196A0A1B0GTZ2 297 aa9.6□□□□□ -0.87
VAMP3-201ENST00000054666 POLR3DP05423 398 aaPredicted RBP9.6□□□□□ -0.87
VAMP3-201ENST00000054666 KIF23Q02241 960 aaPredicted RBP9.6□□□□□ -0.87
VAMP3-201ENST00000054666 ANO6Q4KMQ2 910 aa9.6□□□□□ -0.87
VAMP3-201ENST00000054666 CCDC144CPQ8IYA2 1237 aa9.6□□□□□ -0.87
VAMP3-201ENST00000054666 TRIM22Q8IYM9 498 aa9.6□□□□□ -0.87
VAMP3-201ENST00000054666 FAM84BQ96KN1 310 aaPredicted RBP9.6□□□□□ -0.87
VAMP3-201ENST00000054666 MAST2Q6P0Q8 1798 aa9.6□□□□□ -0.87
VAMP3-201ENST00000054666 CACNA1SQ13698 1873 aa9.6□□□□□ -0.87
VAMP3-201ENST00000054666 ECM29Q5VYK3 1845 aa9.6□□□□□ -0.87
VAMP3-201ENST00000054666 MINDY4BA8MYZ0 360 aa9.6□□□□□ -0.87
VAMP3-201ENST00000054666 GOLGA6L6A8MZA4 724 aa9.6□□□□□ -0.87
VAMP3-201ENST00000054666 CDC27P30260 824 aa9.6□□□□□ -0.87
VAMP3-201ENST00000054666 RCAN1P53805 252 aa9.6□□□□□ -0.87
VAMP3-201ENST00000054666 SSRP1Q08945 709 aaKnown RBP9.6□□□□□ -0.87
VAMP3-201ENST00000054666 RTN1Q16799 776 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms