RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 SPDYE4A6NLX3 237 aa26.14■■□□□ 1.78
TARBP1-201ENST00000040877 JAG2Q9Y219 1238 aa26.14■■□□□ 1.78
TARBP1-201ENST00000040877 KDM5AP29375 1690 aaKnown RBP26.14■■□□□ 1.77
TARBP1-201ENST00000040877 SNX14Q9Y5W7 946 aa26.14■■□□□ 1.77
TARBP1-201ENST00000040877 IKBKGQ9Y6K9 419 aa26.14■■□□□ 1.77
TARBP1-201ENST00000040877 HS1BP3Q53T59 392 aa26.13■■□□□ 1.77
TARBP1-201ENST00000040877 MAATS1Q7Z4T9 603 aa26.13■■□□□ 1.77
TARBP1-201ENST00000040877 CCDC97Q96F63 343 aaPredicted RBP26.13■■□□□ 1.77
TARBP1-201ENST00000040877 HAUS3Q68CZ6 603 aa26.13■■□□□ 1.77
TARBP1-201ENST00000040877 SPATA5Q8NB90 893 aa26.13■■□□□ 1.77
TARBP1-201ENST00000040877 ATP5JP18859 108 aa26.13■■□□□ 1.77
TARBP1-201ENST00000040877 NOLC1Q14978 699 aaKnown RBP eCLIP26.13■■□□□ 1.77
TARBP1-201ENST00000040877 FAM98CQ17RN3 349 aaKnown RBP26.13■■□□□ 1.77
TARBP1-201ENST00000040877 CEP112Q8N8E3 955 aa26.13■■□□□ 1.77
TARBP1-201ENST00000040877 CCDC155Q8N6L0 562 aa26.13■■□□□ 1.77
TARBP1-201ENST00000040877 ZNF594Q96JF6 807 aaPredicted RBP26.13■■□□□ 1.77
TARBP1-201ENST00000040877 MYL5Q02045 173 aa26.12■■□□□ 1.77
TARBP1-201ENST00000040877 HSP90AA4PQ58FG1 418 aa26.12■■□□□ 1.77
TARBP1-201ENST00000040877 SAP30BPQ9UHR5 308 aaKnown RBP26.12■■□□□ 1.77
TARBP1-201ENST00000040877 UBXN1Q04323 297 aa26.12■■□□□ 1.77
TARBP1-201ENST00000040877 LETM2Q2VYF4 491 aa26.12■■□□□ 1.77
TARBP1-201ENST00000040877 CCDC129Q6ZRS4 1044 aa26.12■■□□□ 1.77
TARBP1-201ENST00000040877 KLHDC4Q8TBB5 520 aa26.12■■□□□ 1.77
TARBP1-201ENST00000040877 PICK1Q9NRD5 415 aa26.12■■□□□ 1.77
TARBP1-201ENST00000040877 NEURL1BA8MQ27 555 aa26.12■■□□□ 1.77
TARBP1-201ENST00000040877 DKC1O60832 514 aaKnown RBP eCLIP26.12■■□□□ 1.77
TARBP1-201ENST00000040877 DNAI1Q9UI46 699 aa26.12■■□□□ 1.77
TARBP1-201ENST00000040877 FAM135BQ49AJ0 1406 aa26.12■■□□□ 1.77
TARBP1-201ENST00000040877 GCC2Q8IWJ2 1684 aa26.12■■□□□ 1.77
TARBP1-201ENST00000040877 PNMA6EA0A0J9YXQ4 647 aa26.11■■□□□ 1.77
TARBP1-201ENST00000040877 TSNARE1Q96NA8 513 aa26.11■■□□□ 1.77
TARBP1-201ENST00000040877 BACH1O14867 736 aa26.11■■□□□ 1.77
TARBP1-201ENST00000040877 CNGA4Q8IV77 575 aa26.11■■□□□ 1.77
TARBP1-201ENST00000040877 VWA3AA6NCI4 1184 aa26.11■■□□□ 1.77
TARBP1-201ENST00000040877 ANO1Q5XXA6 986 aa26.11■■□□□ 1.77
TARBP1-201ENST00000040877 CTAGE9A4FU28 777 aa26.11■■□□□ 1.77
TARBP1-201ENST00000040877 HSF2BPO75031 334 aa26.11■■□□□ 1.77
TARBP1-201ENST00000040877 GIGYF1O75420 1035 aaPredicted RBP26.11■■□□□ 1.77
TARBP1-201ENST00000040877 PHKG2P15735 406 aa26.11■■□□□ 1.77
TARBP1-201ENST00000040877 ALDH1B1P30837 517 aa26.11■■□□□ 1.77
TARBP1-201ENST00000040877 OTUD7AQ8TE49 926 aaPredicted RBP26.11■■□□□ 1.77
TARBP1-201ENST00000040877 DSCC1Q9BVC3 393 aa26.11■■□□□ 1.77
TARBP1-201ENST00000040877 LUC7L2Q9Y383 392 aaKnown RBP26.11■■□□□ 1.77
TARBP1-201ENST00000040877 HOMER2Q9NSB8 354 aa26.1■■□□□ 1.77
TARBP1-201ENST00000040877 MYO5CQ9NQX4 1742 aa26.1■■□□□ 1.77
TARBP1-201ENST00000040877 LTKP29376 864 aa26.1■■□□□ 1.77
TARBP1-201ENST00000040877 GIGYF2Q6Y7W6 1299 aaKnown RBP26.1■■□□□ 1.77
TARBP1-201ENST00000040877 CEP83Q9Y592 693 aa26.1■■□□□ 1.77
TARBP1-201ENST00000040877 TMOD4Q9NZQ9 345 aa26.1■■□□□ 1.77
TARBP1-201ENST00000040877 KDRP35968 1356 aa26.1■■□□□ 1.77
TARBP1-201ENST00000040877 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.1■■□□□ 1.771e-8■■■■□ 21.6
TARBP1-201ENST00000040877 LMAN1P49257 510 aa26.09■■□□□ 1.77
TARBP1-201ENST00000040877 TRERF1Q96PN7 1200 aa26.09■■□□□ 1.77
TARBP1-201ENST00000040877 ZKSCAN5Q9Y2L8 839 aa26.09■■□□□ 1.77
TARBP1-201ENST00000040877 VTI1AQ96AJ9 217 aa26.09■■□□□ 1.77
TARBP1-201ENST00000040877 TM6SF1Q9BZW5 370 aa26.09■■□□□ 1.77
TARBP1-201ENST00000040877 USP21Q9UK80 565 aa26.09■■□□□ 1.77
TARBP1-201ENST00000040877 AATKQ6ZMQ8 1374 aa26.09■■□□□ 1.77
TARBP1-201ENST00000040877 ZNF174Q15697 407 aa26.09■■□□□ 1.77
TARBP1-201ENST00000040877 CCDC77Q9BR77 488 aa26.09■■□□□ 1.77
TARBP1-201ENST00000040877 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.09■■□□□ 1.778e-8■■■■■ 60.4
TARBP1-201ENST00000040877 ABCC4O15439 1325 aa26.09■■□□□ 1.77
TARBP1-201ENST00000040877 SPECC1LQ69YQ0 1117 aa26.09■■□□□ 1.77
TARBP1-201ENST00000040877 FAM227BQ96M60 508 aa26.08■■□□□ 1.77
TARBP1-201ENST00000040877 GPCPD1Q9NPB8 672 aa26.08■■□□□ 1.77
TARBP1-201ENST00000040877 PLEKHG1Q9ULL1 1385 aa26.08■■□□□ 1.77
TARBP1-201ENST00000040877 KRT25Q7Z3Z0 450 aa26.08■■□□□ 1.77
TARBP1-201ENST00000040877 FLAD1Q8NFF5 587 aa26.08■■□□□ 1.77
TARBP1-201ENST00000040877 CUTAO60888 179 aa26.08■■□□□ 1.77
TARBP1-201ENST00000040877 V9GY48 417 aaPredicted RBP26.08■■□□□ 1.77
TARBP1-201ENST00000040877 STX17P56962 302 aa26.07■■□□□ 1.76
TARBP1-201ENST00000040877 CNNM4Q6P4Q7 775 aa26.07■■□□□ 1.76
TARBP1-201ENST00000040877 PTGS1P23219 599 aa26.07■■□□□ 1.76
TARBP1-201ENST00000040877 EIF6P56537 245 aaKnown RBP26.07■■□□□ 1.76
TARBP1-201ENST00000040877 ZSWIM4Q9H7M6 989 aa26.07■■□□□ 1.76
TARBP1-201ENST00000040877 COMMD10Q9Y6G5 202 aa26.07■■□□□ 1.76
TARBP1-201ENST00000040877 ARFGAP3Q9NP61 516 aa26.07■■□□□ 1.76
TARBP1-201ENST00000040877 FRMD4BQ9Y2L6 1034 aa26.07■■□□□ 1.76
TARBP1-201ENST00000040877 ATP2A1O14983 1001 aa26.06■■□□□ 1.76
TARBP1-201ENST00000040877 POLR3GO15318 223 aaPredicted RBP26.06■■□□□ 1.76
TARBP1-201ENST00000040877 RPS8P62241 208 aaKnown RBP26.06■■□□□ 1.76
TARBP1-201ENST00000040877 DIS3L2Q8IYB7 885 aaKnown RBP26.06■■□□□ 1.76
TARBP1-201ENST00000040877 LARGE2Q8N3Y3 721 aa26.06■■□□□ 1.76
TARBP1-201ENST00000040877 SSH3Q8TE77 659 aa26.06■■□□□ 1.76
TARBP1-201ENST00000040877 EFCAB6Q5THR3 1501 aa26.06■■□□□ 1.76
TARBP1-201ENST00000040877 KDM2BQ8NHM5 1336 aa26.06■■□□□ 1.76
TARBP1-201ENST00000040877 TAF5LO75529 589 aa26.06■■□□□ 1.76
TARBP1-201ENST00000040877 CPA1P15085 419 aa26.06■■□□□ 1.76
TARBP1-201ENST00000040877 CCT6AP40227 531 aaKnown RBP26.06■■□□□ 1.76
TARBP1-201ENST00000040877 IFNKQ9P0W0 207 aa26.06■■□□□ 1.76
TARBP1-201ENST00000040877 TUBBP07437 444 aa26.06■■□□□ 1.76
TARBP1-201ENST00000040877 CTSWP56202 376 aa26.06■■□□□ 1.76
TARBP1-201ENST00000040877 TRIM14Q14142 442 aa26.06■■□□□ 1.76
TARBP1-201ENST00000040877 AATFQ9NY61 560 aaKnown RBP eCLIP26.06■■□□□ 1.76
TARBP1-201ENST00000040877 ZNF532Q9HCE3 1301 aa26.05■■□□□ 1.76
TARBP1-201ENST00000040877 KCNH3Q9ULD8 1083 aa26.05■■□□□ 1.76
TARBP1-201ENST00000040877 MAGI2Q86UL8 1455 aa26.05■■□□□ 1.76
TARBP1-201ENST00000040877 SMTNP53814 917 aa26.05■■□□□ 1.76
TARBP1-201ENST00000040877 PABPN1LA6NDY0 278 aaKnown RBP26.05■■□□□ 1.76
TARBP1-201ENST00000040877 UBE4AQ14139 1066 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms