RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 FOXP2O15409 715 aa12.11□□□□□ -0.47
CX3CL1-201ENST00000006053 CCP110O43303 1012 aa12.11□□□□□ -0.47
CX3CL1-201ENST00000006053 CBFA2T2O43439 604 aa12.11□□□□□ -0.47
CX3CL1-201ENST00000006053 PNMA6AP0CW24 399 aaPredicted RBP12.11□□□□□ -0.47
CX3CL1-201ENST00000006053 ZAP70P43403 619 aa12.11□□□□□ -0.47
CX3CL1-201ENST00000006053 SCARF1Q14162 830 aa12.11□□□□□ -0.47
CX3CL1-201ENST00000006053 LRRFIP1Q32MZ4 808 aaKnown RBP12.11□□□□□ -0.47
CX3CL1-201ENST00000006053 VPS37DQ86XT2 251 aa12.11□□□□□ -0.47
CX3CL1-201ENST00000006053 XAGE2Q96GT9 111 aa12.11□□□□□ -0.47
CX3CL1-201ENST00000006053 HSD3B7Q9H2F3 369 aa12.11□□□□□ -0.47
CX3CL1-201ENST00000006053 SEC31AO94979 1220 aaKnown RBP12.11□□□□□ -0.47
CX3CL1-201ENST00000006053 TRDNQ13061 729 aa12.11□□□□□ -0.47
CX3CL1-201ENST00000006053 STK11IPQ8N1F8 1099 aa12.11□□□□□ -0.47
CX3CL1-201ENST00000006053 FANCLQ9NW38 375 aa12.11□□□□□ -0.47
CX3CL1-201ENST00000006053 DHX8Q14562 1220 aaKnown RBP12.11□□□□□ -0.47
CX3CL1-201ENST00000006053 CCDC57Q2TAC2 916 aa12.11□□□□□ -0.47
CX3CL1-201ENST00000006053 SPECC1Q5M775 1068 aa12.11□□□□□ -0.47
CX3CL1-201ENST00000006053 KRT40Q6A162 431 aa12.11□□□□□ -0.47
CX3CL1-201ENST00000006053 SHC4Q6S5L8 630 aa12.11□□□□□ -0.47
CX3CL1-201ENST00000006053 MICU3Q86XE3 530 aa12.11□□□□□ -0.47
CX3CL1-201ENST00000006053 ABCC6O95255 1503 aa12.11□□□□□ -0.47
CX3CL1-201ENST00000006053 AFDNP55196 1824 aaKnown RBP12.1□□□□□ -0.47
CX3CL1-201ENST00000006053 GPAA1O43292 621 aa12.1□□□□□ -0.47
CX3CL1-201ENST00000006053 KCNJ6P48051 423 aa12.1□□□□□ -0.47
CX3CL1-201ENST00000006053 METAP2P50579 478 aaKnown RBP eCLIP12.1□□□□□ -0.47
CX3CL1-201ENST00000006053 SIPA1L3O60292 1781 aaPredicted RBP12.1□□□□□ -0.47
CX3CL1-201ENST00000006053 CAPN2P17655 700 aa12.1□□□□□ -0.47
CX3CL1-201ENST00000006053 TRIM65Q6PJ69 517 aa12.1□□□□□ -0.47
CX3CL1-201ENST00000006053 JMYQ8N9B5 988 aa12.1□□□□□ -0.47
CX3CL1-201ENST00000006053 CNNM3Q8NE01 707 aa12.1□□□□□ -0.47
CX3CL1-201ENST00000006053 PHLPP2Q6ZVD8 1323 aa12.1□□□□□ -0.47
CX3CL1-201ENST00000006053 TUBB4AP04350 444 aa12.09□□□□□ -0.47
CX3CL1-201ENST00000006053 PLA2G4AP47712 749 aa12.09□□□□□ -0.47
CX3CL1-201ENST00000006053 APPBP2Q92624 585 aa12.09□□□□□ -0.47
CX3CL1-201ENST00000006053 FANCGO15287 622 aa12.09□□□□□ -0.47
CX3CL1-201ENST00000006053 GNG11P61952 73 aa12.09□□□□□ -0.47
CX3CL1-201ENST00000006053 NFXL1Q6ZNB6 911 aa12.09□□□□□ -0.47
CX3CL1-201ENST00000006053 VSTM4Q8IW00 320 aa12.09□□□□□ -0.47
CX3CL1-201ENST00000006053 REXO1L1PQ8IX06 675 aa12.09□□□□□ -0.47
CX3CL1-201ENST00000006053 FBXL16Q8N461 479 aa12.09□□□□□ -0.47
CX3CL1-201ENST00000006053 MYL10Q9BUA6 226 aa12.09□□□□□ -0.47
CX3CL1-201ENST00000006053 TUBE1Q9UJT0 475 aa12.09□□□□□ -0.47
CX3CL1-201ENST00000006053 MEGF6O75095 1541 aa12.09□□□□□ -0.47
CX3CL1-201ENST00000006053 FOXN1O15353 648 aa12.09□□□□□ -0.47
CX3CL1-201ENST00000006053 ZFYP08048 801 aaPredicted RBP12.09□□□□□ -0.47
CX3CL1-201ENST00000006053 LONRF3Q496Y0 759 aa12.09□□□□□ -0.47
CX3CL1-201ENST00000006053 TEX35Q5T0J7 233 aa12.09□□□□□ -0.47
CX3CL1-201ENST00000006053 PCDHA5Q9Y5H7 936 aa12.09□□□□□ -0.47
CX3CL1-201ENST00000006053 ZSCAN12O43309 604 aa12.08□□□□□ -0.48
CX3CL1-201ENST00000006053 SLC20A2Q08357 652 aa12.08□□□□□ -0.48
CX3CL1-201ENST00000006053 CCDC102BQ68D86 513 aa12.08□□□□□ -0.48
CX3CL1-201ENST00000006053 CPLX2Q6PUV4 134 aaKnown RBP12.08□□□□□ -0.48
CX3CL1-201ENST00000006053 NKX2-3Q8TAU0 364 aa12.08□□□□□ -0.48
CX3CL1-201ENST00000006053 SENP2Q9HC62 589 aa12.08□□□□□ -0.48
CX3CL1-201ENST00000006053 PPP2R2CQ9Y2T4 447 aa12.08□□□□□ -0.48
CX3CL1-201ENST00000006053 PATL2C9JE40 543 aaKnown RBP12.08□□□□□ -0.48
CX3CL1-201ENST00000006053 TADA3O75528 432 aa12.08□□□□□ -0.48
CX3CL1-201ENST00000006053 TRIM29Q14134 588 aa12.08□□□□□ -0.48
CX3CL1-201ENST00000006053 METTL16Q86W50 562 aaKnown RBP12.08□□□□□ -0.48
CX3CL1-201ENST00000006053 ANGEL1Q9UNK9 670 aaKnown RBP12.08□□□□□ -0.48
CX3CL1-201ENST00000006053 B4E1Z4 1266 aa12.08□□□□□ -0.48
CX3CL1-201ENST00000006053 UBE2Q2LH0YL09 131 aa12.08□□□□□ -0.48
CX3CL1-201ENST00000006053 CDC27P30260 824 aa12.08□□□□□ -0.48
CX3CL1-201ENST00000006053 CASQ1P31415 396 aa12.08□□□□□ -0.48
CX3CL1-201ENST00000006053 ADKP55263 362 aaKnown RBP12.08□□□□□ -0.48
CX3CL1-201ENST00000006053 PDE4BQ07343 736 aa12.08□□□□□ -0.48
CX3CL1-201ENST00000006053 CYB5R4Q7L1T6 521 aa12.08□□□□□ -0.48
CX3CL1-201ENST00000006053 FOXP4Q8IVH2 680 aaPredicted RBP12.08□□□□□ -0.48
CX3CL1-201ENST00000006053 KCNH3Q9ULD8 1083 aa12.08□□□□□ -0.48
CX3CL1-201ENST00000006053 PARP3Q9Y6F1 533 aa12.08□□□□□ -0.48
CX3CL1-201ENST00000006053 VWA3AA6NCI4 1184 aa12.07□□□□□ -0.48
CX3CL1-201ENST00000006053 TMED8Q6PL24 325 aaPredicted RBP12.07□□□□□ -0.48
CX3CL1-201ENST00000006053 CCDC191Q8NCU4 936 aa12.07□□□□□ -0.48
CX3CL1-201ENST00000006053 SRRTQ9BXP5 876 aaKnown RBP12.07□□□□□ -0.48
CX3CL1-201ENST00000006053 STRN4Q9NRL3 753 aa12.07□□□□□ -0.48
CX3CL1-201ENST00000006053 HPSEQ9Y251 543 aa12.07□□□□□ -0.48
CX3CL1-201ENST00000006053 AKAP2Q9Y2D5 859 aa12.07□□□□□ -0.48
CX3CL1-201ENST00000006053 SLIT3O75094 1523 aa12.07□□□□□ -0.48
CX3CL1-201ENST00000006053 ZMYM6O95789 1325 aa12.07□□□□□ -0.48
CX3CL1-201ENST00000006053 ZNF335Q9H4Z2 1342 aaPredicted RBP12.07□□□□□ -0.48
CX3CL1-201ENST00000006053 PHRF1Q9P1Y6 1649 aaKnown RBP12.07□□□□□ -0.48
CX3CL1-201ENST00000006053 CIAO1O76071 339 aa12.07□□□□□ -0.48
CX3CL1-201ENST00000006053 PTPAQ15257 358 aa12.07□□□□□ -0.48
CX3CL1-201ENST00000006053 ZNF827Q17R98 1081 aa12.07□□□□□ -0.48
CX3CL1-201ENST00000006053 TBC1D10CQ8IV04 446 aa12.07□□□□□ -0.48
CX3CL1-201ENST00000006053 TRMT44Q8IYL2 757 aaKnown RBP12.07□□□□□ -0.48
CX3CL1-201ENST00000006053 WDR24Q96S15 920 aa12.07□□□□□ -0.48
CX3CL1-201ENST00000006053 BAG1Q99933 345 aaPredicted RBP12.07□□□□□ -0.48
CX3CL1-201ENST00000006053 RGPD5Q99666 1765 aa12.07□□□□□ -0.48
CX3CL1-201ENST00000006053 EFCAB8A8MWE9 144 aa12.06□□□□□ -0.48
CX3CL1-201ENST00000006053 ARHGAP6O43182 974 aa12.06□□□□□ -0.48
CX3CL1-201ENST00000006053 PPP6R2O75170 966 aa12.06□□□□□ -0.48
CX3CL1-201ENST00000006053 IDH1O75874 414 aaKnown RBP12.06□□□□□ -0.48
CX3CL1-201ENST00000006053 CDKL5O76039 1030 aa12.06□□□□□ -0.48
CX3CL1-201ENST00000006053 ATP2B1P20020 1258 aa12.06□□□□□ -0.48
CX3CL1-201ENST00000006053 IARSP41252 1262 aaKnown RBP12.06□□□□□ -0.48
CX3CL1-201ENST00000006053 KARSQ15046 597 aaKnown RBP12.06□□□□□ -0.48
CX3CL1-201ENST00000006053 KRBA2Q6ZNG9 492 aa12.06□□□□□ -0.48
CX3CL1-201ENST00000006053 CCDC34Q96HJ3 373 aa12.06□□□□□ -0.48
CX3CL1-201ENST00000006053 INCENPQ9NQS7 918 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms