RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Cep55Q8BT07 462 aa16.75■□□□□ 0.27
Ssr1-204ENSMUST00000225319 DpydQ8CHR6 1025 aa16.75■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Pms1Q8K119 917 aa16.75■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Rbm33Q9CXK9 1231 aaKnown RBP16.75■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Sytl4Q9R0Q1 673 aa16.75■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Epb41l3Q9WV92 929 aa16.75■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Wdr19Q3UGF1 1341 aa16.75■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Atp8b3Q6UQ17 1335 aa16.75■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Lmnb1P14733 588 aaKnown RBP16.74■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Tpm2P58774 284 aa16.74■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Dynll1P63168 89 aa16.74■□□□□ 0.27
Ssr1-204ENSMUST00000225319 PcQ05920 1178 aa16.74■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Ccdc174Q3U155 467 aa16.74■□□□□ 0.27
Ssr1-204ENSMUST00000225319 SfswapQ3USH5 945 aaKnown RBP16.74■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Nell2Q61220 819 aa16.74■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Agtpbp1Q641K1 1218 aa16.74■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Rnf214Q8BFU3 668 aaKnown RBP16.74■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Bloc1s2Q9CWG9 143 aa16.74■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Cfap70D3YVL2 1141 aa16.74■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Becn1O88597 448 aa16.74■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Ppp4cP97470 307 aa16.74■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Insm1Q63ZV0 521 aa16.74■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Smarcc2Q6PDG5 1213 aa16.74■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Olfr118Q7TRJ6 321 aa16.74■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Fsd2Q8BZ52 692 aa16.74■□□□□ 0.27
Ssr1-204ENSMUST00000225319 E4f1Q8CCE9 783 aa16.74■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Nup88Q8CEC0 753 aaKnown RBP16.74■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Cep57l1Q8VDS7 400 aa16.74■□□□□ 0.27
Ssr1-204ENSMUST00000225319 PdcQ9QW08 244 aa16.74■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Cep63Q3UPP8 700 aa16.73■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Leo1Q5XJE5 667 aa16.73■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Nap1l3Q794H2 544 aa16.73■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Rnf41Q8BH75 317 aa16.73■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Zfp113Q8C689 439 aa16.73■□□□□ 0.27
Ssr1-204ENSMUST00000225319 MlphQ91V27 590 aa16.73■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Trpc5Q9QX29 975 aa16.73■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Nfe2l3Q9WTM4 660 aa16.73■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Lamb1P02469 1786 aa16.73■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Lipo1J3QME6 396 aa16.72■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Adam7O35227 789 aa16.72■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Bnip3O55003 187 aa16.72■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Usp48Q3V0C5 1052 aa16.72■□□□□ 0.27
Ssr1-204ENSMUST00000225319 AsnsQ61024 561 aa16.72■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Samm50Q8BGH2 469 aa16.72■□□□□ 0.27
Ssr1-204ENSMUST00000225319 IarsQ8BU30 1262 aa16.72■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Slc44a4Q91VA1 707 aa16.72■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Bap1Q99PU7 728 aa16.72■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Chd1lQ9CXF7 900 aa16.72■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Pes1Q9EQ61 584 aaKnown RBP16.72■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Rcan1Q9JHG6 198 aa16.72■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Ccdc85cE9Q6B2 420 aa16.71■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Pde6aP27664 859 aa16.71■□□□□ 0.27
Ssr1-204ENSMUST00000225319 XpcP51612 930 aa16.71■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Tmem59lQ7TNI2 337 aa16.71■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Adck5Q80V03 582 aa16.71■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Olfml1Q8BSH2 233 aa16.71■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Tsr2Q8C8T8 191 aa16.71■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Paf1Q8K2T8 535 aa16.71■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Uba5Q8VE47 403 aa16.71■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Klhl34A2AI76 644 aa16.7■□□□□ 0.26
Ssr1-204ENSMUST00000225319 Pde11aP0C1Q2 933 aa16.7■□□□□ 0.26
Ssr1-204ENSMUST00000225319 Zfp51Q3U4L8 781 aa16.7■□□□□ 0.26
Ssr1-204ENSMUST00000225319 Cdcp1Q5U462 833 aa16.7■□□□□ 0.26
Ssr1-204ENSMUST00000225319 Anp32cQ64G17 123 aa16.7■□□□□ 0.26
Ssr1-204ENSMUST00000225319 HelbQ6NVF4 1074 aa16.7■□□□□ 0.26
Ssr1-204ENSMUST00000225319 Rufy2Q8R4C2 606 aa16.7■□□□□ 0.26
Ssr1-204ENSMUST00000225319 Mad1l1Q9WTX8 717 aaKnown RBP16.7■□□□□ 0.26
Ssr1-204ENSMUST00000225319 Tsc2Q61037 1814 aa16.7■□□□□ 0.26
Ssr1-204ENSMUST00000225319 Vmn2r23E9PXI5 849 aa16.7■□□□□ 0.26
Ssr1-204ENSMUST00000225319 Usp17lbE9Q9U0 468 aa16.7■□□□□ 0.26
Ssr1-204ENSMUST00000225319 Atp6v1aP50516 617 aaKnown RBP16.7■□□□□ 0.26
Ssr1-204ENSMUST00000225319 Limch1Q3UH68 1057 aa16.7■□□□□ 0.26
Ssr1-204ENSMUST00000225319 Ehmt1Q5DW34 1296 aa16.7■□□□□ 0.26
Ssr1-204ENSMUST00000225319 VmacQ8BP01 174 aa16.7■□□□□ 0.26
Ssr1-204ENSMUST00000225319 Ttc12Q8BW49 704 aa16.7■□□□□ 0.26
Ssr1-204ENSMUST00000225319 Wdr24Q8CFJ9 790 aa16.7■□□□□ 0.26
Ssr1-204ENSMUST00000225319 Mboat7Q8CHK3 473 aa16.7■□□□□ 0.26
Ssr1-204ENSMUST00000225319 OscarQ8VBT3 265 aa16.7■□□□□ 0.26
Ssr1-204ENSMUST00000225319 Myoz2Q9JJW5 264 aa16.7■□□□□ 0.26
Ssr1-204ENSMUST00000225319 Sall1Q9ER74 1322 aa16.69■□□□□ 0.26
Ssr1-204ENSMUST00000225319 Cd22P35329 862 aa16.69■□□□□ 0.26
Ssr1-204ENSMUST00000225319 Ctr9Q62018 1173 aaKnown RBP16.69■□□□□ 0.26
Ssr1-204ENSMUST00000225319 Ccdc66Q6NS45 935 aa16.69■□□□□ 0.26
Ssr1-204ENSMUST00000225319 Fsd1Q7TPM6 496 aa16.69■□□□□ 0.26
Ssr1-204ENSMUST00000225319 Iffo2Q8R2V2 512 aa16.69■□□□□ 0.26
Ssr1-204ENSMUST00000225319 Trim59Q922Y2 403 aa16.69■□□□□ 0.26
Ssr1-204ENSMUST00000225319 Znf638Q61464 1960 aaKnown RBP16.68■□□□□ 0.26
Ssr1-204ENSMUST00000225319 Pet2A2AHY8 747 aa16.68■□□□□ 0.26
Ssr1-204ENSMUST00000225319 TrdnE9Q9K5 693 aa16.68■□□□□ 0.26
Ssr1-204ENSMUST00000225319 Mtx1P47802 317 aa16.68■□□□□ 0.26
Ssr1-204ENSMUST00000225319 Pcmtd1P59913 357 aa16.68■□□□□ 0.26
Ssr1-204ENSMUST00000225319 Chrna5Q2MKA5 467 aa16.68■□□□□ 0.26
Ssr1-204ENSMUST00000225319 Esyt1Q3U7R1 1092 aaKnown RBP16.68■□□□□ 0.26
Ssr1-204ENSMUST00000225319 Spata5Q3UMC0 893 aaKnown RBP16.68■□□□□ 0.26
Ssr1-204ENSMUST00000225319 Pdzph1Q8BGR1 1238 aa16.68■□□□□ 0.26
Ssr1-204ENSMUST00000225319 Me3Q8BMF3 604 aa16.68■□□□□ 0.26
Ssr1-204ENSMUST00000225319 Sil1Q9EPK6 465 aa16.68■□□□□ 0.26
Ssr1-204ENSMUST00000225319 Wdr33Q8K4P0 1330 aaKnown RBP16.68■□□□□ 0.26
Ssr1-204ENSMUST00000225319 UncxO08934 530 aa16.67■□□□□ 0.26
Ssr1-204ENSMUST00000225319 GapdhsQ64467 440 aa16.67■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 39.1 ms