RNA–Protein interactions for RNA: ENSMUST00000192221.5

Pcdh9-202, Transcript of Protocadherin 9, mousemouse

TSL 1 (best) BASIC

Gene Pcdh9, Length 5,161 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-202ENSMUST00000192221 Cnnm2Q3TWN3 875 aa6.41□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Atp2a3Q64518 1038 aa6.41□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Stx3Q64704 289 aa6.41□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Arhgef6Q8K4I3 771 aa6.41□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Mxra7Q9CZH7 178 aa6.41□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Olr1Q9EQ09 363 aa6.41□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Nup62clA2AG10 272 aa6.41□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Hspa1lP16627 641 aa6.41□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Atp8a2P98200 1148 aa6.41□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Lrriq3Q14DL3 633 aa6.41□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Frmd3Q8BHD4 595 aa6.41□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Afg3l2Q8JZQ2 802 aaKnown RBP6.41□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Atp2a1Q8R429 994 aa6.41□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Ddx27Q921N6 760 aaKnown RBP6.41□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Cul5Q9D5V5 780 aa6.41□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Fmnl1Q9JL26 1094 aa6.41□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Epb41l3Q9WV92 929 aa6.41□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Col20a1Q923P0 1320 aa6.41□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Abl1P00520 1123 aa6.41□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 TrhQ62361 256 aa6.41□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 GopcQ8BH60 463 aa6.41□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Tmem143Q8VD26 458 aa6.41□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Ctnnbl1Q9CWL8 563 aaKnown RBP6.41□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 CenppQ9CZ92 286 aa6.41□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Riok3Q9DBU3 519 aaKnown RBP6.41□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Stat2Q9WVL2 923 aa6.41□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Ccdc183A2AJB1 534 aa6.4□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Cylc2B1AWN8 422 aa6.4□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Gm10093D3YYI8 482 aa6.4□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Hdac1O09106 482 aaKnown RBP6.4□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Ccdc50Q810U5 305 aaKnown RBP6.4□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Vps52Q8C754 723 aaKnown RBP6.4□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 RarsQ9D0I9 660 aaKnown RBP6.4□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Noc2lQ9WV70 747 aaKnown RBP6.4□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Dip2bQ3UH60 1574 aa6.4□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Nrxn3Q6P9K9 1571 aa6.4□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Mst1rQ62190 1378 aa6.4□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Kcnh4A2A5F7 1018 aa6.4□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 MeiocA2AG06 965 aa6.4□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Srek1ip1Q4V9W2 153 aa6.4□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Fgfr1opQ66JX5 399 aa6.4□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Rufy2Q8R4C2 606 aa6.4□□□□□ -1.38
Pcdh9-202ENSMUST00000192221 Trpm1Q2TV84 1622 aa6.4□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 GnaqP21279 359 aa6.4□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Bub1bQ9Z1S0 1052 aa6.4□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Rlbp1Q9Z275 317 aa6.4□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Speer3W4VSP1 261 aa6.4□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 MaddQ80U28 1577 aa6.4□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Zc3h13E9Q784 1729 aaKnown RBP6.4□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Nphp3Q7TNH6 1325 aa6.4□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Gm6583E9Q8Z1 469 aa6.4□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Kif1cO35071 1100 aaKnown RBP6.4□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Cops6O88545 324 aa6.4□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Fhdc1Q3ULZ2 1149 aa6.4□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Ccdc110Q3V125 848 aa6.4□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Sdad1Q80UZ2 687 aaKnown RBP6.4□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Slx1bQ8BX32 270 aa6.4□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Cep57l1Q8VDS7 400 aa6.4□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Kif18aQ91WD7 886 aa6.4□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Ankrd1Q9CR42 319 aa6.4□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Lmbr1lQ9D1E5 489 aa6.4□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Naa16Q9DBB4 864 aa6.4□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 CebpzP53569 1052 aaKnown RBP6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Cfap157Q0VFX2 523 aa6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Thrap3Q569Z6 951 aaKnown RBP6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Tsg101Q61187 391 aa6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Krt77Q6IFZ6 572 aa6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Brf1Q8CFK2 676 aa6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Brms1Q99N20 246 aa6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 4930548H24RikQ9D496 437 aa6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 IkQ9Z1M8 557 aaKnown RBP6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Iqsec2Q5DU25 1478 aa6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Atp10bB1AWN4 1474 aa6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Gm28043E0CXC2 719 aa6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 EsrrgP62509 458 aa6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Zbtb16Q3UQ17 673 aa6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 RgmbQ7TQ33 436 aa6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Usp6nlQ80XC3 819 aa6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Bicdl2Q8CHW5 507 aa6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Pspc1Q8R326 523 aaKnown RBP6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Rnf8Q8VC56 488 aa6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Klf15Q9EPW2 415 aa6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Vamp4O70480 141 aa6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Casp8O89110 480 aa6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Lmnb2P21619 596 aaKnown RBP6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Eef1dP57776 281 aaKnown RBP6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Ncf1Q09014 390 aa6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Usp48Q3V0C5 1052 aa6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Prpf4bQ61136 1007 aaKnown RBP6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Ccdc172Q810N9 267 aa6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Ptcd1Q8C2E4 695 aaKnown RBP6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Plcb1Q9Z1B3 1216 aa6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Xrn1P97789 1719 aaKnown RBP6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Tubb1A2AQ07 451 aa6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Ppfia1B2RXQ2 1266 aa6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Agbl1Q09M05 972 aa6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 SfswapQ3USH5 945 aaKnown RBP6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 ScocQ78YZ6 125 aa6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Aldh8a1Q8BH00 487 aa6.39□□□□□ -1.39
Pcdh9-202ENSMUST00000192221 Anapc4Q91W96 807 aa6.39□□□□□ -1.39
Retrieved 100 of 22,080 RNA–protein pairs in 40.5 ms