RNA–Protein interactions for RNA: ENSMUST00000176686.7

Cpsf6-207, Transcript of Cleavage and polyadenylation specificity factor subunit 6, mousemouse

TSL 1 (best) BASIC

Gene Cpsf6, Length 2,200 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6-207ENSMUST00000176686 Popdc2Q9ES82 367 aa17.16■□□□□ 0.34
Cpsf6-207ENSMUST00000176686 Nup98Q6PFD9 1816 aaKnown RBP17.15■□□□□ 0.34
Cpsf6-207ENSMUST00000176686 Gnat2P50149 354 aa17.15■□□□□ 0.34
Cpsf6-207ENSMUST00000176686 Siah1aP61092 282 aa17.15■□□□□ 0.34
Cpsf6-207ENSMUST00000176686 Rtkn2Q14B46 604 aa17.15■□□□□ 0.34
Cpsf6-207ENSMUST00000176686 Slc44a1Q6X893 653 aa17.15■□□□□ 0.34
Cpsf6-207ENSMUST00000176686 Bsdc1Q80Y55 427 aa17.15■□□□□ 0.34
Cpsf6-207ENSMUST00000176686 Q8BZJ8 459 aa17.15■□□□□ 0.34
Cpsf6-207ENSMUST00000176686 CerkQ8K4Q7 531 aa17.15■□□□□ 0.34
Cpsf6-207ENSMUST00000176686 Zbtb7aO88939 569 aaKnown RBP17.15■□□□□ 0.34
Cpsf6-207ENSMUST00000176686 Dnm1P39053 867 aa17.15■□□□□ 0.34
Cpsf6-207ENSMUST00000176686 Cdkn1cP49919 348 aa17.15■□□□□ 0.34
Cpsf6-207ENSMUST00000176686 Fam170aQ66LM6 333 aa17.15■□□□□ 0.34
Cpsf6-207ENSMUST00000176686 Dhx40Q6PE54 779 aaKnown RBP17.15■□□□□ 0.34
Cpsf6-207ENSMUST00000176686 Slu7Q8BHJ9 585 aa17.15■□□□□ 0.34
Cpsf6-207ENSMUST00000176686 Lrrc2Q8VDB8 371 aa17.15■□□□□ 0.34
Cpsf6-207ENSMUST00000176686 Rcan1Q9JHG6 198 aa17.15■□□□□ 0.34
Cpsf6-207ENSMUST00000176686 Slc4a4O88343 1079 aa17.14■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Foxp1P58462 705 aa17.14■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Vps33bP59016 617 aa17.14■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Olfm5Q8BU90 496 aa17.14■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Evc2Q8K1G2 1220 aa17.14■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Kcnk13Q8R1P5 405 aa17.14■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Grpel1Q99LP6 217 aa17.14■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Cacna1sQ02789 1880 aa17.14■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Gm45140A0A0N4SUM8 220 aa17.13■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Cdk4P30285 303 aa17.13■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 CebpaP53566 359 aa17.13■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Epha2Q03145 977 aa17.13■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Zc3h12cQ5DTV4 884 aa17.13■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Rec8Q8C5S7 591 aa17.13■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Zfp202Q8C879 641 aa17.13■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Pold4Q9CWP8 107 aa17.13■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 1700029H14RikE9PY36 240 aa17.13■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 IqcgQ80W32 419 aa17.13■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Slitrk3Q810B9 980 aa17.13■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Paf1Q8K2T8 535 aa17.13■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Luzp1Q8R4U7 1068 aaKnown RBP17.13■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Tlcd1Q99JT6 247 aa17.13■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Acot9Q9R0X4 439 aaKnown RBP17.13■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Stxbp4Q9WV89 557 aa17.13■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Prl7d1P04769 244 aa17.12■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Pfkfb1P70266 471 aa17.12■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 9230110C19RikQ8CC70 267 aa17.12■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 DmtnQ9WV69 405 aa17.12■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 MsnP26041 577 aaKnown RBP17.12■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 XpcP51612 930 aa17.12■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Ckap2Q3V1H1 664 aa17.12■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Zkscan4Q5SZT6 480 aa17.12■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Wasf1Q8R5H6 559 aa17.12■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Cnpy2Q9QXT0 182 aa17.12■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Ube4aE9Q735 1028 aa17.11■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Oas2E9Q9A9 742 aa17.11■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Slc7a3P70423 618 aa17.11■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Vps37dQ810I0 261 aa17.11■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Ints4Q8CIM8 964 aa17.11■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Dnaaf4Q8R368 420 aa17.11■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Stag1Q9D3E6 1258 aa17.11■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Irx4Q9QY61 515 aa17.11■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Dennd3A2RT67 1274 aa17.11■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Npy5rO70342 466 aa17.11■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Cd3dP04235 173 aa17.11■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Trim30aP15533 496 aa17.11■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Hps6Q8BLY7 805 aa17.11■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 HdlbpQ8VDJ3 1268 aaKnown RBP17.11■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Ifi35Q9D8C4 286 aa17.11■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Lgr5Q9Z1P4 907 aa17.11■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Myh15E9Q264 1925 aa17.1■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Bicdl1A0JNT9 577 aa17.1■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Gpatch11Q3UFS4 262 aa17.1■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Rnf41Q8BH75 317 aa17.1■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 NenfQ9CQ45 171 aa17.1■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 WtapQ9ER69 396 aa17.1■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Suclg2Q9Z2I8 433 aa17.1■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 C4bP01029 1738 aa17.1■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Myh6Q02566 1938 aaKnown RBP17.1■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Izumo3A6PWV3 263 aa17.09■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 U2af2P26369 475 aaKnown RBP17.09■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Dnajc2P54103 621 aaKnown RBP17.09■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Sept9Q80UG5 583 aa17.09■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Sgsm1Q8BPQ7 1093 aa17.09■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Ankrd1Q9CR42 319 aa17.09■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Rps6ka4Q9Z2B9 773 aa17.09■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Stox1B2RQL2 990 aa17.09■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Bin1O08539 588 aaKnown RBP17.09■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Q3TYL0 343 aa17.09■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Glis3Q6XP49 780 aa17.09■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Lrrc8aQ80WG5 810 aa17.09■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Sh3bp5lQ99LH9 392 aa17.09■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 AfdnQ9QZQ1 1820 aaKnown RBP17.09■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Myh4Q5SX39 1939 aa17.08■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 CltaO08585 235 aa17.08■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Cyp24a1Q64441 514 aa17.08■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Ccz1Q8C1Y8 480 aa17.08■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Serpina10Q8R121 448 aa17.08■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Cnpy3Q9DAU1 276 aa17.08■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Dpf1Q9QX66 387 aa17.08■□□□□ 0.33
Cpsf6-207ENSMUST00000176686 Ccdc6D3YZP9 469 aa17.08■□□□□ 0.32
Cpsf6-207ENSMUST00000176686 Zbtb21E9Q444 1094 aa17.08■□□□□ 0.32
Cpsf6-207ENSMUST00000176686 Pcdhb14Q6PB90 796 aa17.08■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 35.3 ms