RNA–Protein interactions for RNA: ENSMUST00000165443.2

Nup50-201, Transcript of Nuclear pore complex protein Nup50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup50, Length 4,741 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50-201ENSMUST00000165443 Tbc1d4Q8BYJ6 1307 aa11.91□□□□□ -0.5
Nup50-201ENSMUST00000165443 Atp2a2O55143 1044 aaKnown RBP11.91□□□□□ -0.5
Nup50-201ENSMUST00000165443 Cops6O88545 324 aa11.91□□□□□ -0.5
Nup50-201ENSMUST00000165443 LdhaP06151 332 aaKnown RBP11.91□□□□□ -0.5
Nup50-201ENSMUST00000165443 Fam170aQ66LM6 333 aa11.91□□□□□ -0.5
Nup50-201ENSMUST00000165443 Sdccag8Q80UF4 717 aa11.91□□□□□ -0.5
Nup50-201ENSMUST00000165443 Hdac9Q99N13 588 aa11.91□□□□□ -0.5
Nup50-201ENSMUST00000165443 Rbm33Q9CXK9 1231 aaKnown RBP11.91□□□□□ -0.5
Nup50-201ENSMUST00000165443 Cd274Q9EP73 290 aa11.91□□□□□ -0.5
Nup50-201ENSMUST00000165443 Lrrc7Q80TE7 1490 aa11.91□□□□□ -0.5
Nup50-201ENSMUST00000165443 Eftud2O08810 971 aaKnown RBP11.91□□□□□ -0.5
Nup50-201ENSMUST00000165443 Myl3P09542 204 aa11.91□□□□□ -0.5
Nup50-201ENSMUST00000165443 Zfp51Q3U4L8 781 aa11.91□□□□□ -0.5
Nup50-201ENSMUST00000165443 Q4VA45 678 aa11.91□□□□□ -0.5
Nup50-201ENSMUST00000165443 Krt77Q6IFZ6 572 aa11.91□□□□□ -0.5
Nup50-201ENSMUST00000165443 Cdca7Q9D0M2 382 aa11.91□□□□□ -0.5
Nup50-201ENSMUST00000165443 Irs4Q9Z0Y7 1216 aa11.91□□□□□ -0.5
Nup50-201ENSMUST00000165443 Erbb3Q61526 1339 aa11.91□□□□□ -0.5
Nup50-201ENSMUST00000165443 Gm5624F6ZZG8 207 aa11.91□□□□□ -0.5
Nup50-201ENSMUST00000165443 Map3k9Q3U1V8 1077 aa11.91□□□□□ -0.5
Nup50-201ENSMUST00000165443 Ccdc25Q78PG9 208 aa11.91□□□□□ -0.5
Nup50-201ENSMUST00000165443 Fam204aQ8C6C7 236 aa11.91□□□□□ -0.5
Nup50-201ENSMUST00000165443 Tmx1Q8VBT0 278 aa11.91□□□□□ -0.5
Nup50-201ENSMUST00000165443 Golga5Q9QYE6 729 aa11.91□□□□□ -0.5
Nup50-201ENSMUST00000165443 Prrc2bQ7TPM1 1486 aaKnown RBP11.91□□□□□ -0.5
Nup50-201ENSMUST00000165443 Bpifb4A2BGH0 617 aa11.9□□□□□ -0.5
Nup50-201ENSMUST00000165443 PparaP23204 468 aa11.9□□□□□ -0.5
Nup50-201ENSMUST00000165443 Ccdc189Q6NZQ0 333 aa11.9□□□□□ -0.5
Nup50-201ENSMUST00000165443 Zkscan8Q8BSL0 588 aa11.9□□□□□ -0.5
Nup50-201ENSMUST00000165443 Pak1O88643 545 aa11.9□□□□□ -0.5
Nup50-201ENSMUST00000165443 Timm10P62073 90 aa11.9□□□□□ -0.5
Nup50-201ENSMUST00000165443 Arhgef2Q60875 985 aa11.9□□□□□ -0.5
Nup50-201ENSMUST00000165443 Ift20Q61025 132 aa11.9□□□□□ -0.5
Nup50-201ENSMUST00000165443 Ankrd13dQ6PD24 605 aa11.9□□□□□ -0.5
Nup50-201ENSMUST00000165443 Elf2Q9JHC9 593 aa11.9□□□□□ -0.5
Nup50-201ENSMUST00000165443 JmyQ9QXM1 983 aa11.9□□□□□ -0.5
Nup50-201ENSMUST00000165443 Gm16486A0A1D5RMD1 1434 aa11.9□□□□□ -0.5
Nup50-201ENSMUST00000165443 AU022751B1B0V2 589 aa11.9□□□□□ -0.5
Nup50-201ENSMUST00000165443 Rsph10bE9PYQ0 876 aa11.9□□□□□ -0.5
Nup50-201ENSMUST00000165443 KaznQ69ZS8 779 aa11.9□□□□□ -0.5
Nup50-201ENSMUST00000165443 Lmbrd2Q8C561 694 aa11.9□□□□□ -0.5
Nup50-201ENSMUST00000165443 Myl6bQ8CI43 207 aa11.9□□□□□ -0.5
Nup50-201ENSMUST00000165443 Prr16A3KMN5 304 aa11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 Ppp1r9aH3BJD6 1292 aa11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 Aimp1P31230 310 aaKnown RBP11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 SbdsP70122 250 aa11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 Aifm3Q3TY86 605 aa11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 Nsrp1Q5NCR9 542 aa11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 Glg1Q61543 1175 aaKnown RBP11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 Nek5Q7TSC3 627 aa11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 Mxra7Q9CZH7 178 aa11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 Ccdc152E9PX14 254 aa11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 Zfpm1O35615 995 aa11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 Sept7O55131 436 aa11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 VimP20152 466 aaKnown RBP11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 Abcb4P21440 1276 aa11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 Ranbp1P34022 203 aaKnown RBP11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 Atp8a2P98200 1148 aa11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 Ccdc57Q6PHN1 1016 aa11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 Ginm1Q91WR6 327 aa11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 Ndufab1Q9CR21 156 aa11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 2310002L09RikQ9D7L5 217 aa11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 Polr2dQ9D7M8 142 aaKnown RBP11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 Sept14Q9DA97 430 aa11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 AatkQ80YE4 1365 aa11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 Cetn3O35648 167 aa11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 Bach2P97303 839 aa11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 Pram1Q6BCL1 675 aa11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 Kiaa1328Q6NZK5 612 aa11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 Svs3aF2Z472 265 aa11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 Mcm5P49718 733 aa11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 Tex35Q14BK3 207 aa11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 PsdQ5DTT2 1024 aa11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 Exoc3Q6KAR6 755 aa11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 Prkab2Q6PAM0 271 aa11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 Prpf40bQ80W14 870 aa11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 Ifih1Q8R5F7 1025 aa11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 PpanQ91YU8 470 aaKnown RBP11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 Gbp7Q91Z40 638 aa11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 Tab2Q99K90 693 aa11.89□□□□□ -0.51
Nup50-201ENSMUST00000165443 Dnajc21E9Q8D0 531 aa11.88□□□□□ -0.51
Nup50-201ENSMUST00000165443 Pdrg1P59048 133 aa11.88□□□□□ -0.51
Nup50-201ENSMUST00000165443 PcQ05920 1178 aa11.88□□□□□ -0.51
Nup50-201ENSMUST00000165443 Pank2Q3U4S0 443 aa11.88□□□□□ -0.51
Nup50-201ENSMUST00000165443 Frat2Q8K025 231 aa11.88□□□□□ -0.51
Nup50-201ENSMUST00000165443 Fam114a1Q9D281 569 aa11.88□□□□□ -0.51
Nup50-201ENSMUST00000165443 Krt18P05784 423 aa11.88□□□□□ -0.51
Nup50-201ENSMUST00000165443 Psmb7P70195 277 aa11.88□□□□□ -0.51
Nup50-201ENSMUST00000165443 Ubac1Q8VDI7 409 aa11.88□□□□□ -0.51
Nup50-201ENSMUST00000165443 Rsrc1Q9DBU6 334 aa11.88□□□□□ -0.51
Nup50-201ENSMUST00000165443 IntuQ059U7 942 aa11.88□□□□□ -0.51
Nup50-201ENSMUST00000165443 Cfap57Q9D180 1249 aa11.88□□□□□ -0.51
Nup50-201ENSMUST00000165443 Naa16Q9DBB4 864 aa11.88□□□□□ -0.51
Nup50-201ENSMUST00000165443 Xpo4Q9ESJ0 1151 aa11.88□□□□□ -0.51
Nup50-201ENSMUST00000165443 Lztfl1Q9JHQ5 299 aa11.88□□□□□ -0.51
Nup50-201ENSMUST00000165443 Abca9Q8K449 1623 aa11.88□□□□□ -0.51
Nup50-201ENSMUST00000165443 MthfslL7N466 203 aa11.88□□□□□ -0.51
Nup50-201ENSMUST00000165443 Eef2P58252 858 aaKnown RBP11.88□□□□□ -0.51
Nup50-201ENSMUST00000165443 Itga6Q61739 1091 aa11.88□□□□□ -0.51
Nup50-201ENSMUST00000165443 Klhl20Q8VCK5 604 aa11.88□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 25.1 ms