RNA–Protein interactions for RNA: ENSMUST00000111051.9

Bdnf-210, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,125 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-210ENSMUST00000111051 Speer4f2E9Q366 295 aa9.53□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Slc20a2Q80UP8 656 aa9.53□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Slc13a4Q8BZ82 625 aa9.53□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Inpp5bQ8K337 993 aa9.53□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Znf131Q8K3J5 619 aa9.53□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Ciao1Q99KN2 339 aa9.53□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Klhl10Q9D5V2 608 aa9.53□□□□□ -0.88
Bdnf-210ENSMUST00000111051 NgdnQ9DB96 315 aaKnown RBP9.53□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Golga5Q9QYE6 729 aa9.53□□□□□ -0.88
Bdnf-210ENSMUST00000111051 AmfrQ9R049 643 aa9.53□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Qser1A2BIE1 1698 aa9.53□□□□□ -0.88
Bdnf-210ENSMUST00000111051 NktrP30415 1453 aa9.53□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Capn2O08529 700 aa9.53□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Cyp26a1O55127 497 aa9.53□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Actn3O88990 900 aaKnown RBP9.53□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Ftl2P49945 183 aa9.53□□□□□ -0.88
Bdnf-210ENSMUST00000111051 NpeppsQ11011 920 aa9.53□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Ube2oQ6ZPJ3 1288 aa9.53□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Ttc12Q8BW49 704 aa9.53□□□□□ -0.88
Bdnf-210ENSMUST00000111051 PigbQ9JJQ0 542 aa9.53□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Pnpla7A2AJ88 1352 aa9.53□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Dnajc25A2ALW5 357 aa9.53□□□□□ -0.88
Bdnf-210ENSMUST00000111051 CalrP14211 416 aaKnown RBP9.53□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Cdr2P97817 455 aa9.53□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Top1Q04750 767 aaKnown RBP9.53□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Ccdc129Q14B48 1034 aa9.53□□□□□ -0.88
Bdnf-210ENSMUST00000111051 RubcnlQ3TD16 648 aa9.53□□□□□ -0.88
Bdnf-210ENSMUST00000111051 VeztQ3ZK22 780 aa9.53□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Secisbp2lQ6A098 1086 aaKnown RBP9.53□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Ccdc122Q8BVN0 290 aa9.53□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Gtf3c6Q9D8P7 227 aa9.53□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Lonp2Q9DBN5 852 aa9.53□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Atp10bB1AWN4 1474 aa9.52□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Dip2bQ3UH60 1574 aa9.52□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Slc1a4O35874 532 aa9.52□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Hmx1O70218 332 aa9.52□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Foxp1P58462 705 aa9.52□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Ccdc114Q3UX62 658 aa9.52□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Cdc37Q61081 379 aa9.52□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Fam170aQ66LM6 333 aa9.52□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Ccdc181Q80ZU5 509 aa9.52□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Klhl40Q9D783 621 aa9.52□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Abcb6Q9DC29 842 aa9.52□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Zfp853A0A1D5RM95 733 aa9.52□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Kcna6Q61923 529 aa9.52□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Tubgcp2Q921G8 905 aa9.52□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Trim59Q922Y2 403 aa9.52□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Smc1aQ9CU62 1233 aaKnown RBP9.52□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Abca14E9Q8F8 1683 aa9.52□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Cops6O88545 324 aa9.52□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Dhx40Q6PE54 779 aaKnown RBP9.52□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Jade2Q6ZQF7 829 aa9.52□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Rnf187Q8BFX1 236 aa9.52□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Cep128Q8BI22 1102 aa9.52□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Cd209bQ8CJ91 325 aa9.52□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Gps2Q921N8 327 aa9.52□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Kansl3A2RSY1 903 aaKnown RBP9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Calm1P0DP26 149 aaKnown RBP9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Calm2P0DP27 149 aaKnown RBP9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Calm3P0DP28 149 aaKnown RBP9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Ccnl1Q52KE7 532 aaKnown RBP9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Gm12185Q5NCB2 835 aa9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Nlrp9bQ66X22 1003 aa9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Ctdp1Q7TSG2 960 aa9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Ccdc172Q810N9 267 aa9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 VmacQ8BP01 174 aa9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Mei4Q8BRM6 389 aa9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Hps3Q91VB4 1002 aa9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Tlcd1Q99JT6 247 aa9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Kif1aP33173 1695 aa9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Nfatc2ipO09130 412 aa9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Prl3d1P18121 224 aa9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Myl10Q62082 202 aa9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Ppp2r5bQ6PD28 497 aa9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Triml1Q8BVP1 470 aa9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Zswim4Q8C7B8 1101 aa9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Golph3lQ8R088 285 aaKnown RBP9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Smtnl1Q99LM3 459 aa9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 NapgQ9CWZ7 312 aa9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Simc1E9Q6E9 1354 aa9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 PparaP23204 468 aa9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 MarcksP26645 309 aaKnown RBP9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Tbc1d2bQ3U0J8 965 aa9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Ccdc42Q5SV66 316 aa9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Slf2Q6P9P0 1278 aa9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Snd1Q78PY7 910 aaKnown RBP9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Trim56Q80VI1 734 aaKnown RBP9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Ccdc38Q8CDN8 563 aa9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Nup133Q8R0G9 1155 aa9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Tab2Q99K90 693 aa9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 CltcQ68FD5 1675 aaKnown RBP9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Sipa1l1Q8C0T5 1782 aa9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Rreb1Q3UH06 1700 aaKnown RBP9.51□□□□□ -0.89
Bdnf-210ENSMUST00000111051 NpcdF8VQB8 469 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Exosc10P56960 887 aaKnown RBP9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Pald1P70261 859 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Ccdc57Q6PHN1 1016 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Tsen34Q8BMZ5 316 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Ppm1mQ8BU27 406 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Olfm5Q8BU90 496 aa9.5□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms