RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Terf2ipQ91VL8 393 aa17.33■□□□□ 0.37
Nup88-202ENSMUST00000108530 Stag1Q9D3E6 1258 aa17.33■□□□□ 0.37
Nup88-202ENSMUST00000108530 Gm3893E9Q1I1 302 aa17.33■□□□□ 0.36
Nup88-202ENSMUST00000108530 Chrna5Q2MKA5 467 aa17.33■□□□□ 0.36
Nup88-202ENSMUST00000108530 Llgl2Q3TJ91 1027 aa17.33■□□□□ 0.36
Nup88-202ENSMUST00000108530 Pcsk7Q61139 770 aa17.33■□□□□ 0.36
Nup88-202ENSMUST00000108530 Mxd3Q80US8 206 aa17.33■□□□□ 0.36
Nup88-202ENSMUST00000108530 Lrrc2Q8VDB8 371 aa17.33■□□□□ 0.36
Nup88-202ENSMUST00000108530 Bap1Q99PU7 728 aa17.33■□□□□ 0.36
Nup88-202ENSMUST00000108530 Zbtb21E9Q444 1094 aa17.32■□□□□ 0.36
Nup88-202ENSMUST00000108530 Metap2O08663 478 aaKnown RBP17.32■□□□□ 0.36
Nup88-202ENSMUST00000108530 Csrnp1P59054 583 aa17.32■□□□□ 0.36
Nup88-202ENSMUST00000108530 Ctr9Q62018 1173 aaKnown RBP17.32■□□□□ 0.36
Nup88-202ENSMUST00000108530 Ccdc82Q6PG04 518 aa17.32■□□□□ 0.36
Nup88-202ENSMUST00000108530 4931400O07RikQ9D4M5 137 aa17.32■□□□□ 0.36
Nup88-202ENSMUST00000108530 Myh13B1AR69 1938 aa17.32■□□□□ 0.36
Nup88-202ENSMUST00000108530 SlkO54988 1233 aa17.31■□□□□ 0.36
Nup88-202ENSMUST00000108530 Pcmtd1P59913 357 aa17.31■□□□□ 0.36
Nup88-202ENSMUST00000108530 Bend4P86174 541 aa17.31■□□□□ 0.36
Nup88-202ENSMUST00000108530 Slc44a1Q6X893 653 aa17.31■□□□□ 0.36
Nup88-202ENSMUST00000108530 Bola3Q8CEI1 110 aa17.31■□□□□ 0.36
Nup88-202ENSMUST00000108530 Col23a1Q8K4G2 532 aa17.31■□□□□ 0.36
Nup88-202ENSMUST00000108530 Clstn1Q9EPL2 979 aa17.31■□□□□ 0.36
Nup88-202ENSMUST00000108530 Mtcl1Q3UHU5 1945 aa17.31■□□□□ 0.36
Nup88-202ENSMUST00000108530 Sned1Q70E20 1403 aa17.31■□□□□ 0.36
Nup88-202ENSMUST00000108530 Aox3G3X982 1335 aa17.31■□□□□ 0.36
Nup88-202ENSMUST00000108530 Cnnm2Q3TWN3 875 aa17.31■□□□□ 0.36
Nup88-202ENSMUST00000108530 Ehmt1Q5DW34 1296 aa17.31■□□□□ 0.36
Nup88-202ENSMUST00000108530 Sirt2Q8VDQ8 389 aa17.31■□□□□ 0.36
Nup88-202ENSMUST00000108530 Epb41l3Q9WV92 929 aa17.31■□□□□ 0.36
Nup88-202ENSMUST00000108530 TrdnE9Q9K5 693 aa17.3■□□□□ 0.36
Nup88-202ENSMUST00000108530 Kif4P33174 1231 aa17.3■□□□□ 0.36
Nup88-202ENSMUST00000108530 Ube2hP62257 183 aa17.3■□□□□ 0.36
Nup88-202ENSMUST00000108530 Prom2Q3UUY6 835 aa17.3■□□□□ 0.36
Nup88-202ENSMUST00000108530 Adck5Q80V03 582 aa17.3■□□□□ 0.36
Nup88-202ENSMUST00000108530 Tmem179Q8BHH9 233 aa17.3■□□□□ 0.36
Nup88-202ENSMUST00000108530 Plcd1Q8R3B1 756 aa17.3■□□□□ 0.36
Nup88-202ENSMUST00000108530 UvssaQ9D479 717 aa17.3■□□□□ 0.36
Nup88-202ENSMUST00000108530 Naaladl2A0A0N4SUJ3 795 aa17.3■□□□□ 0.36
Nup88-202ENSMUST00000108530 Gm20425E9Q035 978 aaKnown RBP17.3■□□□□ 0.36
Nup88-202ENSMUST00000108530 Kif23E9Q5G3 953 aa17.3■□□□□ 0.36
Nup88-202ENSMUST00000108530 SrprbP47758 269 aa17.3■□□□□ 0.36
Nup88-202ENSMUST00000108530 Wdr24Q8CFJ9 790 aa17.3■□□□□ 0.36
Nup88-202ENSMUST00000108530 Ndufa8Q9DCJ5 172 aa17.3■□□□□ 0.36
Nup88-202ENSMUST00000108530 Igbp1bQ9QZ29 343 aa17.3■□□□□ 0.36
Nup88-202ENSMUST00000108530 Znf638Q61464 1960 aaKnown RBP17.29■□□□□ 0.36
Nup88-202ENSMUST00000108530 CebpaP53566 359 aa17.29■□□□□ 0.36
Nup88-202ENSMUST00000108530 Hps6Q8BLY7 805 aa17.29■□□□□ 0.36
Nup88-202ENSMUST00000108530 SdsQ8VBT2 327 aa17.29■□□□□ 0.36
Nup88-202ENSMUST00000108530 Srgap1Q91Z69 1062 aa17.29■□□□□ 0.36
Nup88-202ENSMUST00000108530 Terb1Q8C0V1 768 aa17.29■□□□□ 0.36
Nup88-202ENSMUST00000108530 Myl6bQ8CI43 207 aa17.29■□□□□ 0.36
Nup88-202ENSMUST00000108530 WtapQ9ER69 396 aa17.29■□□□□ 0.36
Nup88-202ENSMUST00000108530 Kifc2O08672 792 aa17.28■□□□□ 0.36
Nup88-202ENSMUST00000108530 Nmt2O70311 529 aa17.28■□□□□ 0.36
Nup88-202ENSMUST00000108530 Hmgb2P30681 210 aaKnown RBP17.28■□□□□ 0.36
Nup88-202ENSMUST00000108530 Terf1P70371 421 aa17.28■□□□□ 0.36
Nup88-202ENSMUST00000108530 Pdcl3Q8BVF2 240 aa17.28■□□□□ 0.36
Nup88-202ENSMUST00000108530 Nup88Q8CEC0 753 aaKnown RBP17.28■□□□□ 0.36
Nup88-202ENSMUST00000108530 Stn1Q8K2X3 378 aa17.28■□□□□ 0.36
Nup88-202ENSMUST00000108530 Pla2g12bQ99P27 195 aa17.28■□□□□ 0.36
Nup88-202ENSMUST00000108530 Sall1Q9ER74 1322 aa17.28■□□□□ 0.36
Nup88-202ENSMUST00000108530 Adamtsl1Q8BLI0 1745 aa17.28■□□□□ 0.36
Nup88-202ENSMUST00000108530 Ces1hD3Z298 562 aa17.28■□□□□ 0.36
Nup88-202ENSMUST00000108530 PtmaP26350 111 aa17.28■□□□□ 0.36
Nup88-202ENSMUST00000108530 Rnf41Q8BH75 317 aa17.28■□□□□ 0.36
Nup88-202ENSMUST00000108530 Ranbp6Q8BIV3 1105 aa17.28■□□□□ 0.36
Nup88-202ENSMUST00000108530 Jag1Q9QXX0 1218 aa17.28■□□□□ 0.36
Nup88-202ENSMUST00000108530 Pnpla6Q3TRM4 1355 aa17.27■□□□□ 0.36
Nup88-202ENSMUST00000108530 Rgs12Q8CGE9 1381 aa17.27■□□□□ 0.36
Nup88-202ENSMUST00000108530 Gm36210A0A1B0GS00 229 aa17.27■□□□□ 0.36
Nup88-202ENSMUST00000108530 LyarQ08288 388 aaKnown RBP17.27■□□□□ 0.36
Nup88-202ENSMUST00000108530 Kif22Q3V300 660 aa17.27■□□□□ 0.36
Nup88-202ENSMUST00000108530 Glis3Q6XP49 780 aa17.27■□□□□ 0.36
Nup88-202ENSMUST00000108530 Glipr1l2Q9CQ35 332 aa17.27■□□□□ 0.36
Nup88-202ENSMUST00000108530 Trmt44Q9D2Q2 713 aa17.27■□□□□ 0.36
Nup88-202ENSMUST00000108530 Atp6v1aP50516 617 aaKnown RBP17.26■□□□□ 0.35
Nup88-202ENSMUST00000108530 Best3Q6H1V1 669 aa17.26■□□□□ 0.35
Nup88-202ENSMUST00000108530 Zscan22Q8BGS5 496 aa17.26■□□□□ 0.35
Nup88-202ENSMUST00000108530 Gpr108Q91WD0 569 aa17.26■□□□□ 0.35
Nup88-202ENSMUST00000108530 Gtf2iQ9ESZ8 998 aaKnown RBP17.26■□□□□ 0.35
Nup88-202ENSMUST00000108530 Krt85Q9Z2T6 507 aa17.26■□□□□ 0.35
Nup88-202ENSMUST00000108530 Tcof1O08784 1320 aaKnown RBP17.26■□□□□ 0.35
Nup88-202ENSMUST00000108530 Rnf214Q8BFU3 668 aaKnown RBP17.26■□□□□ 0.35
Nup88-202ENSMUST00000108530 R3hcc1Q8BSI6 488 aa17.26■□□□□ 0.35
Nup88-202ENSMUST00000108530 Skor1Q8BX46 964 aa17.26■□□□□ 0.35
Nup88-202ENSMUST00000108530 Ccdc47Q9D024 483 aaKnown RBP17.26■□□□□ 0.35
Nup88-202ENSMUST00000108530 Cnpy3Q9DAU1 276 aa17.26■□□□□ 0.35
Nup88-202ENSMUST00000108530 Chd5A2A8L1 1946 aa17.26■□□□□ 0.35
Nup88-202ENSMUST00000108530 Atp8b3Q6UQ17 1335 aa17.26■□□□□ 0.35
Nup88-202ENSMUST00000108530 Ccdc85cE9Q6B2 420 aa17.25■□□□□ 0.35
Nup88-202ENSMUST00000108530 Myl3P09542 204 aa17.25■□□□□ 0.35
Nup88-202ENSMUST00000108530 Esyt2Q3TZZ7 845 aa17.25■□□□□ 0.35
Nup88-202ENSMUST00000108530 Aak1Q3UHJ0 959 aa17.25■□□□□ 0.35
Nup88-202ENSMUST00000108530 Usp28Q5I043 1051 aa17.25■□□□□ 0.35
Nup88-202ENSMUST00000108530 Ttll4Q80UG8 1193 aa17.25■□□□□ 0.35
Nup88-202ENSMUST00000108530 Pramel6Q810Y9 485 aa17.25■□□□□ 0.35
Nup88-202ENSMUST00000108530 Dynll2Q9D0M5 89 aa17.25■□□□□ 0.35
Nup88-202ENSMUST00000108530 CpdO89001 1377 aa17.25■□□□□ 0.35
Nup88-202ENSMUST00000108530 Mcm3P25206 812 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 42.4 ms