RNA–Protein interactions for RNA: ENSMUST00000106618.7

Ttc39a-202, Transcript of Tetratricopeptide repeat protein 39A, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39a, Length 1,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39a-202ENSMUST00000106618 Ell2Q3UKU1 639 aa12.55□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Spata5Q3UMC0 893 aaKnown RBP12.55□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 1810065E05RikQ5NC41 235 aa12.55□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Casc1Q6TDU8 730 aa12.55□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Olfr118Q7TRJ6 321 aa12.55□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Mtmr3Q8K296 1196 aa12.55□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Paf1Q8K2T8 535 aa12.55□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 SrrtQ99MR6 875 aaKnown RBP12.55□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 NsmfQ99NF2 532 aa12.55□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Phf14Q9D4H9 881 aa12.55□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Efcc1Q9JJF6 558 aa12.55□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Pnpla6Q3TRM4 1355 aa12.55□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Col4a5Q63ZW6 1691 aa12.55□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Prss40A6H6T1 365 aa12.54□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Me1P06801 572 aa12.54□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Pcmtd1P59913 357 aa12.54□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 VmacQ8BP01 174 aa12.54□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 9230110C19RikQ8CC70 267 aa12.54□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Mknk2Q8CDB0 459 aa12.54□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 SdsQ8VBT2 327 aa12.54□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Kcnn1Q9EQR3 537 aa12.54□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Rcan1Q9JHG6 198 aa12.54□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Cfap99A0A140LIX9 648 aa12.54□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Atp6v0a2P15920 856 aa12.54□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Mtx1P47802 317 aa12.54□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Bend4P86174 541 aa12.54□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Lins1Q3U1D0 764 aa12.54□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Fam198bQ3UPI1 517 aa12.54□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Ckap2Q3V1H1 664 aa12.54□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Fchsd1Q6PFY1 688 aa12.54□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Otop3Q80UF9 577 aa12.54□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Rnf214Q8BFU3 668 aaKnown RBP12.54□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Rnf41Q8BH75 317 aa12.54□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Ranbp6Q8BIV3 1105 aa12.54□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 St5Q924W7 1134 aa12.54□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Ccdc47Q9D024 483 aaKnown RBP12.54□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 PdcQ9QW08 244 aa12.54□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Cdc45Q9Z1X9 566 aa12.54□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Togaram1Q6A070 1776 aaKnown RBP12.53□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 1700113H08RikE9Q9Q5 327 aa12.53□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Tnni2P13412 182 aa12.53□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Mcm3P25206 812 aaKnown RBP12.53□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Zfp51Q3U4L8 781 aa12.53□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Cdcp1Q5U462 833 aa12.53□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Terb1Q8C0V1 768 aa12.53□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Cnpy3Q9DAU1 276 aa12.53□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Suclg2Q9Z2I8 433 aa12.53□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Prdm11A2AGX3 565 aa12.52□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Ccng2O08918 344 aa12.52□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Hmgb2P30681 210 aaKnown RBP12.52□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Sec23aQ01405 765 aa12.52□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Esyt2Q3TZZ7 845 aa12.52□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Spg7Q3ULF4 781 aa12.52□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Ctr9Q62018 1173 aaKnown RBP12.52□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Slitrk3Q810B9 980 aa12.52□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 RarsQ9D0I9 660 aaKnown RBP12.52□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Mrpl12Q9DB15 201 aaKnown RBP12.52□□□□□ -0.4
Ttc39a-202ENSMUST00000106618 Pet2A2AHY8 747 aa12.52□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 NppbP40753 121 aa12.52□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 PcQ05920 1178 aa12.52□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Pcsk7Q61139 770 aa12.52□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Tex2Q6ZPJ0 1128 aaKnown RBP12.52□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 UvssaQ9D479 717 aa12.52□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 WtapQ9ER69 396 aa12.52□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Epb41l3Q9WV92 929 aa12.52□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Wdr33Q8K4P0 1330 aaKnown RBP12.52□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Ccdc112A0AUP1 442 aa12.51□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Foxp1P58462 705 aa12.51□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Tmem109Q3UBX0 243 aa12.51□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Cdkl5Q3UTQ8 938 aa12.51□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Adck5Q80V03 582 aa12.51□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Lrrc2Q8VDB8 371 aa12.51□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Uba5Q8VE47 403 aa12.51□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Nup188Q6ZQH8 1759 aa12.51□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Ambra1A2AH22 1300 aa12.5□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Gm3893E9Q1I1 302 aa12.5□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Abl1P00520 1123 aa12.5□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Dnajc2P54103 621 aaKnown RBP12.5□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Cplx2P84086 134 aa12.5□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Gas1Q01721 343 aa12.5□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Mum1l1Q4VA55 681 aa12.5□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 CerkQ8K4Q7 531 aa12.5□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Col20a1Q923P0 1320 aa12.5□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Kif22Q3V300 660 aa12.5□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Ehmt1Q5DW34 1296 aa12.5□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Prkag3Q8BGM7 489 aa12.5□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Bicd2Q921C5 820 aa12.5□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Chd1lQ9CXF7 900 aa12.5□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Col4a3bpQ9EQG9 624 aa12.5□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Rcan3Q9JKK0 239 aa12.5□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Mtcl1Q3UHU5 1945 aa12.49□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Tcof1O08784 1320 aaKnown RBP12.49□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Msl1Q6PDM1 616 aa12.49□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Glis3Q6XP49 780 aa12.49□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Acnat2Q8BGG9 420 aa12.49□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Tmem179Q8BHH9 233 aa12.49□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Slc44a4Q91VA1 707 aa12.49□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Ccdc39Q9D5Y1 937 aa12.49□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Clic4Q9QYB1 253 aa12.49□□□□□ -0.41
Ttc39a-202ENSMUST00000106618 Add3Q9QYB5 706 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms