RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Vil1Q62468 827 aa11.74□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 EngaseQ8BX80 734 aa11.74□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Xrcc4Q924T3 326 aa11.74□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Txnrd3Q99MD6 652 aa11.74□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Ltn1Q6A009 1767 aa11.74□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Pkp1P97350 728 aaKnown RBP11.74□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 1700003F12RikA2AKE5 210 aa11.74□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Pde11aP0C1Q2 933 aa11.74□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Prpf38aQ4FK66 312 aaKnown RBP11.74□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Tomm22Q9CPQ3 142 aa11.74□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Ly6iQ9WU67 134 aa11.74□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Frmpd3A0A140LIW3 1774 aa11.74□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Gm29094F6Q785 221 aa11.73□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Znf697Q569E7 569 aa11.73□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Zcwpw1Q6IR42 630 aa11.73□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Cep55Q8BT07 462 aa11.73□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Alx1Q8C8B0 326 aa11.73□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 KinQ8K339 391 aa11.73□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Myh3P13541 1940 aa11.73□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 DnttP09838 530 aa11.73□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 TbcaP48428 108 aaKnown RBP11.73□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Rpusd2Q149F1 553 aa11.73□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Gm21985Q6P6P5 1106 aa11.73□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Olfr118Q7TRJ6 321 aa11.73□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 KhnynQ80U38 671 aa11.73□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Shtn1Q8K2Q9 631 aa11.73□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Glis2Q8VDL9 521 aa11.73□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Lipo1J3QME6 396 aa11.73□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Myl3P09542 204 aa11.73□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Il7P10168 154 aa11.73□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 GmpsQ3THK7 693 aa11.73□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Ctr9Q62018 1173 aaKnown RBP11.73□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Cyp27a1Q9DBG1 533 aa11.73□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Cct2P80314 535 aaKnown RBP11.72□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 VrtnQ3SYK4 740 aa11.72□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Fam196bQ6GQV1 535 aa11.72□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Mageb2A2AHM0 380 aa11.72□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Smarce1O54941 411 aaKnown RBP11.72□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Rps6kb1Q8BSK8 525 aa11.72□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Lonrf3Q9D4H7 753 aa11.72□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Mical3Q8CJ19 1993 aa11.72□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Slc1a4O35874 532 aa11.72□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Pde4aO89084 844 aa11.72□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 FosbP13346 338 aa11.72□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Mrpl50Q8VDT9 159 aaKnown RBP11.72□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 MlphQ91V27 590 aa11.72□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Ttll4Q80UG8 1193 aa11.71□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 HibadhQ99L13 335 aaKnown RBP11.71□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Stk32bQ9JJX8 414 aa11.71□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Arid4aF8VPQ2 1261 aaKnown RBP11.71□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 MycnP03966 462 aaKnown RBP11.71□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Usp53P15975 1069 aa11.71□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Myo1bP46735 1107 aa11.71□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Esyt2Q3TZZ7 845 aa11.71□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Aak1Q3UHJ0 959 aa11.71□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Bms1Q6PGF5 1284 aaKnown RBP11.71□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Aox3G3X982 1335 aa11.71□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Casz1Q9CWL2 1761 aa11.71□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Clrn2B2RVW2 232 aa11.71□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Dcdc2bF7BCK0 340 aa11.71□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Fam178bQ24JP3 464 aa11.71□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Shisa4Q8CA71 197 aa11.71□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Cchcr1Q8K2I2 770 aa11.71□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Pla2g12bQ99P27 195 aa11.71□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Aox4Q3TYQ9 1336 aa11.7□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 NesQ6P5H2 1864 aaKnown RBP11.7□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Me1P06801 572 aa11.7□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Psmd1Q3TXS7 953 aa11.7□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Tm4sf1Q64302 202 aa11.7□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Fsd1Q7TPM6 496 aa11.7□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Rnf41Q8BH75 317 aa11.7□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Tor1aip2Q8BYU6 502 aa11.7□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Atxn7Q8R4I1 867 aa11.7□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Cap1P40124 474 aa11.7□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Eef2P58252 858 aaKnown RBP11.7□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Utp18Q5SSI6 552 aaKnown RBP11.7□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 DymQ8CHY3 669 aa11.7□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Yipf1Q91VU1 306 aa11.7□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Rufy3Q9D394 469 aa11.7□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Dmrtc1Q9D9R7 182 aa11.7□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Cyp2d34L7N463 504 aa11.7□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Stx8O88983 236 aa11.7□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Cd3dP04235 173 aa11.7□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Ppp4cP97470 307 aa11.7□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Znf667Q2TL60 609 aa11.7□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 RubcnlQ3TD16 648 aa11.7□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Ccdc174Q3U155 467 aa11.7□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Ncbp1Q3UYV9 790 aaKnown RBP11.7□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 9230110C19RikQ8CC70 267 aa11.7□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Trappc12Q8K2L8 797 aa11.7□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Map3k9Q3U1V8 1077 aa11.69□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 CbarpQ66L44 698 aa11.69□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Tekt3Q6X6Z7 490 aa11.69□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Nol12Q8BG17 217 aa11.69□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Catsper2A2ARP9 588 aa11.69□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Nmt2O70311 529 aa11.69□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Eme2Q56A04 373 aa11.69□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Slc10a5Q5PT54 434 aa11.69□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Tsr2Q8C8T8 191 aa11.69□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Atad2Q8CDM1 1040 aa11.69□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms