RNA–Protein interactions for RNA: ENSMUST00000077689.13

Ssh1-201, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 3,164 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-201ENSMUST00000077689 IntuQ059U7 942 aa13.04□□□□□ -0.32
Ssh1-201ENSMUST00000077689 Mum1l1Q4VA55 681 aa13.04□□□□□ -0.32
Ssh1-201ENSMUST00000077689 Zfp113Q8C689 439 aa13.04□□□□□ -0.32
Ssh1-201ENSMUST00000077689 Bin1O08539 588 aaKnown RBP13.04□□□□□ -0.32
Ssh1-201ENSMUST00000077689 Fam71bQ5STT6 665 aa13.04□□□□□ -0.32
Ssh1-201ENSMUST00000077689 Sycp1Q62209 993 aa13.04□□□□□ -0.32
Ssh1-201ENSMUST00000077689 Zcwpw1Q6IR42 630 aa13.04□□□□□ -0.32
Ssh1-201ENSMUST00000077689 Ccdc93Q7TQK5 629 aa13.04□□□□□ -0.32
Ssh1-201ENSMUST00000077689 Lmod1Q8BVA4 595 aa13.04□□□□□ -0.32
Ssh1-201ENSMUST00000077689 Farp2Q91VS8 1065 aa13.04□□□□□ -0.32
Ssh1-201ENSMUST00000077689 Desi2Q9D291 194 aa13.04□□□□□ -0.32
Ssh1-201ENSMUST00000077689 Echdc1Q9D9V3 322 aa13.04□□□□□ -0.32
Ssh1-201ENSMUST00000077689 Atp8b3Q6UQ17 1335 aa13.03□□□□□ -0.32
Ssh1-201ENSMUST00000077689 Ttc13A0A1L1SSC7 844 aa13.03□□□□□ -0.32
Ssh1-201ENSMUST00000077689 FosbP13346 338 aa13.03□□□□□ -0.32
Ssh1-201ENSMUST00000077689 Ms4a2P20490 235 aa13.03□□□□□ -0.32
Ssh1-201ENSMUST00000077689 Tti2Q8BGV4 512 aa13.03□□□□□ -0.32
Ssh1-201ENSMUST00000077689 Ptpn23Q6PB44 1692 aa13.03□□□□□ -0.32
Ssh1-201ENSMUST00000077689 Bcl9Q9D219 1425 aa13.03□□□□□ -0.32
Ssh1-201ENSMUST00000077689 Gm21698A0A087WQP8 267 aa13.03□□□□□ -0.32
Ssh1-201ENSMUST00000077689 Tex13c2A0A0G2JGA3 530 aa13.03□□□□□ -0.32
Ssh1-201ENSMUST00000077689 Dnajc25A2ALW5 357 aa13.03□□□□□ -0.32
Ssh1-201ENSMUST00000077689 Fam43bA2AM80 330 aa13.03□□□□□ -0.32
Ssh1-201ENSMUST00000077689 Gm21671G3UY31 267 aa13.03□□□□□ -0.32
Ssh1-201ENSMUST00000077689 Exoc4O35382 975 aa13.03□□□□□ -0.32
Ssh1-201ENSMUST00000077689 Ier5O89113 308 aa13.03□□□□□ -0.32
Ssh1-201ENSMUST00000077689 G3bp2P97379 482 aaKnown RBP13.03□□□□□ -0.32
Ssh1-201ENSMUST00000077689 LbrQ3U9G9 626 aaKnown RBP13.03□□□□□ -0.32
Ssh1-201ENSMUST00000077689 Atad2Q8CDM1 1040 aa13.03□□□□□ -0.32
Ssh1-201ENSMUST00000077689 Cd209bQ8CJ91 325 aa13.03□□□□□ -0.32
Ssh1-201ENSMUST00000077689 Mex3cQ05A36 652 aaKnown RBP13.02□□□□□ -0.32
Ssh1-201ENSMUST00000077689 Ric8aQ3TIR3 530 aa13.02□□□□□ -0.32
Ssh1-201ENSMUST00000077689 LgsnQ8CIX8 563 aa13.02□□□□□ -0.32
Ssh1-201ENSMUST00000077689 Apbb1ipQ8R5A3 670 aa13.02□□□□□ -0.32
Ssh1-201ENSMUST00000077689 Nop2Q922K7 793 aaKnown RBP13.02□□□□□ -0.32
Ssh1-201ENSMUST00000077689 Ndufab1Q9CR21 156 aa13.02□□□□□ -0.32
Ssh1-201ENSMUST00000077689 Dusp10Q9ESS0 483 aa13.02□□□□□ -0.32
Ssh1-201ENSMUST00000077689 Scn7aB1AYL1 1681 aa13.02□□□□□ -0.32
Ssh1-201ENSMUST00000077689 Usp5P56399 858 aaKnown RBP13.02□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Ppp1r37Q8BKR5 712 aa13.02□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Msantd4Q91YU3 345 aa13.02□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Uts2Q9QZQ3 123 aa13.02□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Tlr7P58681 1050 aa13.02□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Specc1lQ2KN98 1118 aaKnown RBP13.02□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Ddx17Q501J6 650 aaKnown RBP13.02□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Zranb3Q6NZP1 1069 aa13.02□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Chmp7Q8R1T1 451 aa13.02□□□□□ -0.33
Ssh1-201ENSMUST00000077689 TkfcQ8VC30 578 aa13.02□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Psmd2Q8VDM4 908 aa13.02□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Rbm5Q91YE7 815 aaKnown RBP13.02□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Q9D9S1 216 aa13.02□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Stat2Q9WVL2 923 aa13.02□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Tpx2A2APB8 745 aaKnown RBP13.01□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Trove2O08848 538 aa13.01□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Myo1fP70248 1099 aa13.01□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Map3k2Q61083 619 aa13.01□□□□□ -0.33
Ssh1-201ENSMUST00000077689 GckrQ91X44 587 aa13.01□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Prpf6Q91YR7 941 aaKnown RBP13.01□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Tceal9Q9DD24 104 aa13.01□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Eif3aP23116 1344 aaKnown RBP13.01□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Pnpla7A2AJ88 1352 aa13.01□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Nkx2-3P97334 362 aa13.01□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Mybpc2Q5XKE0 1136 aa13.01□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Tcp11l1Q8BTG3 509 aa13.01□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Nat10Q8K224 1024 aaKnown RBP13.01□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Efcc1Q9JJF6 558 aa13.01□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Lmtk3Q5XJV6 1424 aa13□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Atf3Q60765 181 aa13□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Ppfibp1Q8C8U0 969 aaKnown RBP13□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Tceanc2Q8R2M0 207 aa13□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Srgap1Q91Z69 1062 aa13□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Card14Q99KF0 999 aa13□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Ebag9Q9D0V7 213 aa13□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Lztfl1Q9JHQ5 299 aa13□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Ahnak2E9PYB0 1738 aaKnown RBP13□□□□□ -0.33
Ssh1-201ENSMUST00000077689 PtprvP70289 1705 aa13□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Trpm3Q5F4S9 1721 aa13□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Zfpm1O35615 995 aa13□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Usp28Q5I043 1051 aa13□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Lamb3Q61087 1168 aa13□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Agtpbp1Q641K1 1218 aa13□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Bend3Q6PAL0 825 aa13□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Exd1Q8CDF7 570 aa13□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Mtmr6Q8VE11 617 aa13□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Tet3Q8BG87 1668 aa13□□□□□ -0.33
Ssh1-201ENSMUST00000077689 RabggtaQ9JHK4 567 aa13□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Gkap1Q9JMB0 366 aa13□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Col1a2Q01149 1372 aa12.99□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Rrp1P56183 494 aaKnown RBP12.99□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Psmb7P70195 277 aa12.99□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Sco1Q5SUC9 284 aa12.99□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Snd1Q78PY7 910 aaKnown RBP12.99□□□□□ -0.33
Ssh1-201ENSMUST00000077689 AopepQ8BXQ6 817 aa12.99□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Trim11Q99PQ2 467 aa12.99□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Bloc1s2Q9CWG9 143 aa12.99□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Fam50bQ9WTJ8 334 aa12.99□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Coro1cQ9WUM4 474 aa12.99□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Ccdc24E9PUW8 296 aa12.99□□□□□ -0.33
Ssh1-201ENSMUST00000077689 VeztQ3ZK22 780 aa12.99□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Atp1a3Q6PIC6 1013 aa12.99□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms