RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Tut1Q8R3F9 869 aa10.5□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Pak1O88643 545 aa10.49□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Maip1Q8BHE8 291 aa10.49□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Zkscan8Q8BSL0 588 aa10.49□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Tpcn2Q8BWC0 731 aa10.49□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Xrcc4Q924T3 326 aa10.49□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Gm5935Q497S0 212 aa10.49□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Gtf3c5Q8R2T8 520 aa10.49□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Lonrf3Q9D4H7 753 aa10.49□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Calml3Q9D6P8 149 aa10.49□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Irs4Q9Z0Y7 1216 aa10.49□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 PalldQ9ET54 1408 aa10.49□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Prr16A3KMN5 304 aa10.49□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Krt8P11679 490 aaKnown RBP10.49□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Mdh1bQ5F204 500 aa10.49□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Ift20Q61025 132 aa10.49□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Trim6Q8BGE7 488 aa10.49□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Zscan22Q8BGS5 496 aa10.49□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Sf3a3Q9D554 501 aaKnown RBP10.49□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Rsrc1Q9DBU6 334 aa10.49□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Sorbs3Q9R1Z8 733 aa10.49□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Astn2Q80Z10 1352 aa10.49□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Prl3d3A0A0M6L0J6 224 aa10.49□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 PparaP23204 468 aa10.49□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Gngt1Q61012 74 aa10.49□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Gm2030D3Z7C4 212 aa10.49□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Sult6b1P0CC03 303 aa10.49□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Art2aP17981 287 aa10.49□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Plcb3P51432 1234 aaKnown RBP10.49□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Ints8Q80V86 995 aa10.49□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 AdpgkQ8VDL4 496 aa10.49□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Pcdhb22Q91XZ8 794 aa10.49□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 NapaQ9DB05 295 aa10.49□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Mrpl12Q9DB15 201 aaKnown RBP10.49□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Mtmr7Q9Z2C9 660 aa10.49□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Plekhg2Q6KAU7 1340 aa10.48□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Actn3O88990 900 aaKnown RBP10.48□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Ms4a1P19437 291 aa10.48□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Haus1Q8BHX1 278 aa10.48□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Sde2Q8K1J5 448 aaKnown RBP10.48□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Tm6sf1P58749 370 aa10.48□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Cdr2P97817 455 aa10.48□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 EsrrbQ61539 433 aa10.48□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 KaznQ69ZS8 779 aa10.48□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Edc4Q3UJB9 1406 aaKnown RBP10.48□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Micall1Q8BGT6 870 aa10.48□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Synpo2Q91YE8 1087 aaKnown RBP10.48□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 St5Q924W7 1134 aa10.48□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 ThemisQ8BGW0 636 aa10.48□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Dydc2Q9D3X8 139 aa10.48□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Dpf1Q9QX66 387 aa10.48□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Skor2A7M7C7 1008 aa10.48□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Pls1Q3V0K9 630 aa10.48□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Kiaa1024Q8K3V7 917 aa10.48□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 ByslO54825 436 aaKnown RBP10.47□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Diaph2O70566 1098 aa10.47□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Mx1P09922 631 aa10.47□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Ankrd13dQ6PD24 605 aa10.47□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Fam204aQ8C6C7 236 aa10.47□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Apol10bG3X9K7 334 aa10.47□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Glg1Q61543 1175 aaKnown RBP10.47□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Trerf1Q8BXJ2 1205 aa10.47□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Bmp2kQ91Z96 1138 aa10.47□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Kif21aQ9QXL2 1672 aa10.47□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Rpl13P47963 211 aaKnown RBP10.47□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Ifit1Q64282 463 aa10.47□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Apol7cQ8C6E1 369 aa10.47□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Tbc1d2B1AVH7 922 aa10.47□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Psmc4P54775 418 aa10.47□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Snx25Q3ZT31 840 aa10.47□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Mtus1Q5HZI1 1210 aa10.47□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Klhl7Q8BUL5 586 aa10.47□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Spata16Q8C636 571 aa10.47□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Rab44Q8CB87 725 aa10.47□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Proca1B0QZF7 307 aa10.47□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Epb41l2O70318 988 aaKnown RBP10.47□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Atp6v0a2P15920 856 aa10.47□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 EmbP21995 330 aa10.47□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Asic2Q925H0 512 aa10.47□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Pdcd6ipQ9WU78 869 aaKnown RBP10.47□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Hoxc9P09633 260 aa10.47□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Kcnj14Q8JZN3 434 aa10.47□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Lrrc7Q80TE7 1490 aa10.47□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 MthfslL7N466 203 aa10.46□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Rfc1P35601 1131 aa10.46□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 SpopQ6ZWS8 374 aa10.46□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Traf3ip3Q8C0G2 513 aa10.46□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 NelfbQ8C4Y3 580 aa10.46□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Lin9Q8C735 542 aa10.46□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Atp2a2O55143 1044 aaKnown RBP10.46□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Stmn2P55821 179 aa10.46□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Snrpa1P57784 255 aaKnown RBP10.46□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Kif22Q3V300 660 aa10.46□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Cep128Q8BI22 1102 aa10.46□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Ccdc113Q8C5T8 377 aa10.46□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Krt20Q9D312 431 aa10.46□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 TsksO54887 585 aa10.46□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Aimp1P31230 310 aaKnown RBP10.46□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Lrrc8aQ80WG5 810 aa10.46□□□□□ -0.73
Prpf40a-201ENSMUST00000076313 Dhx38Q80X98 1228 aa10.46□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms