RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Gm3409A0A0G2JE67 319 aa11.13□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Vgll3P85442 326 aa11.13□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Pde4dQ01063 747 aa11.13□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Ccdc34Q3UI66 367 aa11.13□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Atp1a2Q6PIE5 1020 aa11.13□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Eno4Q8C042 619 aa11.13□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Yeats4Q9CR11 227 aaKnown RBP11.13□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 C5P06684 1680 aa11.13□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Kmt5bQ3U8K7 883 aa11.13□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Cep112Q5PR68 954 aa11.13□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Znf532Q6NXK2 1036 aa11.13□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Abtb2Q7TQI7 1024 aa11.13□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Tsen34Q8BMZ5 316 aa11.13□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Tango6Q8C3S2 1079 aa11.13□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Ufl1Q8CCJ3 793 aaKnown RBP11.13□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Tmem143Q8VD26 458 aa11.13□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Klc3Q91W40 508 aa11.13□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Tlcd1Q99JT6 247 aa11.13□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Plekho1Q9JIY0 408 aa11.13□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Hdac6Q9Z2V5 1149 aa11.13□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Col14a1Q80X19 1797 aa11.13□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Cyp2j7A0A140T8U1 504 aa11.12□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Prl7d1P04769 244 aa11.12□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Ano2Q8CFW1 1002 aa11.12□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 CpvlQ9D3S9 478 aa11.12□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 CoblQ5NBX1 1337 aaKnown RBP11.12□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Ampd3O08739 766 aa11.12□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Cyp2d10P24456 504 aa11.12□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Q66JV7 365 aa11.12□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Dhx40Q6PE54 779 aaKnown RBP11.12□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Mei1Q9D4I2 1268 aa11.12□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Ipo7Q9EPL8 1038 aaKnown RBP11.12□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Large1Q9Z1M7 756 aa11.12□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Cdhr2E9Q7P9 1308 aa11.12□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Gm43638A0A0J9YU36 694 aa11.12□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Pramel3A2AHA7 463 aa11.12□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Gm7903A2AWL1 463 aa11.12□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 AV320801A2AWL3 467 aa11.12□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Gm15023L7MUB4 467 aa11.12□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Irx2P81066 474 aa11.12□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Triml1Q8BVP1 470 aa11.12□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Brd3Q8K2F0 726 aaKnown RBP11.12□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Lrrc59Q922Q8 307 aaKnown RBP11.12□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Krt23Q99PS0 422 aa11.12□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Cfap45Q9D9U9 551 aa11.12□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Sel1lQ9Z2G6 790 aa11.12□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Mast3Q3U214 1321 aa11.12□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Pard3Q99NH2 1333 aa11.12□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Pde4bB1AWC9 736 aa11.11□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Speer4dL7N216 212 aa11.11□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Rgs9O54828 675 aa11.11□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 MycbpapQ5SUV2 932 aa11.11□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Ovgp1Q62010 721 aa11.11□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Krt39Q6IFX4 482 aa11.11□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Tcp11l1Q8BTG3 509 aa11.11□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Bola3Q8CEI1 110 aa11.11□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Inpp5bQ8K337 993 aa11.11□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Pcdhb22Q91XZ8 794 aa11.11□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Tcof1O08784 1320 aaKnown RBP11.11□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Dhx8A2A4P0 1244 aaKnown RBP11.11□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Trim30cD3YVI9 513 aa11.11□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 AK157302I3ITR1 129 aa11.11□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Smarcc2Q6PDG5 1213 aa11.11□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Igsf3Q6ZQA6 1194 aa11.11□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Isca1Q9D924 129 aa11.11□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Lmbr1Q9JIT0 490 aa11.11□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Efcc1Q9JJF6 558 aa11.11□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Suclg2Q9Z2I8 433 aa11.11□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Cyp26c1B2RXA7 518 aa11.11□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Ccdc191J3QQ27 883 aa11.11□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Txndc16Q7TN22 820 aa11.11□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Amigo3Q8C2S7 508 aa11.11□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Rbm5Q91YE7 815 aaKnown RBP11.11□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 NsmfQ99NF2 532 aa11.11□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Kiaa0232Q80U59 1396 aaKnown RBP11.11□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Dennd3A2RT67 1274 aa11.1□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Tbc1d8bA3KGB4 1114 aa11.1□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Slc4a1P04919 929 aa11.1□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Ttll12Q3UDE2 639 aa11.1□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Trak2Q6P9N8 913 aa11.1□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Clca2Q8BG22 942 aa11.1□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Rbm43Q99J64 343 aa11.1□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Npc1l1Q6T3U4 1333 aa11.1□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Zbtb38Q3LR78 1197 aa11.1□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 C87499Q3UX49 493 aa11.1□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Jakmip3Q5DTN8 844 aa11.1□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 RragbQ6NTA4 374 aa11.1□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Kdm3aQ6PCM1 1323 aa11.1□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Ubn2Q80WC1 1314 aa11.1□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Alg3Q8K2A8 438 aa11.1□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Znf704Q9ERQ3 566 aa11.1□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Myo5bP21271 1818 aa11.1□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Scn4aQ9ER60 1841 aa11.1□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Pcdhb9E9Q5G2 828 aa11.1□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Ift88Q61371 824 aa11.1□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Cyp4f39Q8BGU0 532 aa11.1□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Etf1Q8BWY3 437 aaKnown RBP11.1□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Sipa1l2Q80TE4 1722 aa11.1□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Ccdc93Q7TQK5 629 aa11.09□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 NalcnQ8BXR5 1738 aa11.09□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 24.6 ms