RNA–Protein interactions for RNA: ENSMUST00000048077.11

Lime1-201, Transcript of Lck-interacting transmembrane adapter 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lime1, Length 1,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1-201ENSMUST00000048077 Stag1Q9D3E6 1258 aa16.09■□□□□ 0.17
Lime1-201ENSMUST00000048077 Sil1Q9EPK6 465 aa16.09■□□□□ 0.17
Lime1-201ENSMUST00000048077 Zscan29E9Q5B4 869 aa16.08■□□□□ 0.16
Lime1-201ENSMUST00000048077 Dnm1P39053 867 aa16.08■□□□□ 0.16
Lime1-201ENSMUST00000048077 Irf5P56477 497 aa16.08■□□□□ 0.16
Lime1-201ENSMUST00000048077 PcQ05920 1178 aa16.08■□□□□ 0.16
Lime1-201ENSMUST00000048077 Washc4Q3UMB9 1173 aa16.08■□□□□ 0.16
Lime1-201ENSMUST00000048077 Pcdhb14Q6PB90 796 aa16.08■□□□□ 0.16
Lime1-201ENSMUST00000048077 Sec62Q8BU14 398 aaKnown RBP16.08■□□□□ 0.16
Lime1-201ENSMUST00000048077 Rbm43Q99J64 343 aa16.08■□□□□ 0.16
Lime1-201ENSMUST00000048077 NenfQ9CQ45 171 aa16.08■□□□□ 0.16
Lime1-201ENSMUST00000048077 Xpo4Q9ESJ0 1151 aa16.08■□□□□ 0.16
Lime1-201ENSMUST00000048077 CrcpO35427 148 aa16.07■□□□□ 0.16
Lime1-201ENSMUST00000048077 Dync1i1O88485 628 aa16.07■□□□□ 0.16
Lime1-201ENSMUST00000048077 Cd3dP04235 173 aa16.07■□□□□ 0.16
Lime1-201ENSMUST00000048077 Susd4Q8BH32 490 aa16.07■□□□□ 0.16
Lime1-201ENSMUST00000048077 Ranbp6Q8BIV3 1105 aa16.07■□□□□ 0.16
Lime1-201ENSMUST00000048077 Tcp11l1Q8BTG3 509 aa16.07■□□□□ 0.16
Lime1-201ENSMUST00000048077 Otud6bQ8K2H2 294 aa16.07■□□□□ 0.16
Lime1-201ENSMUST00000048077 Ces1dQ8VCT4 565 aa16.07■□□□□ 0.16
Lime1-201ENSMUST00000048077 Myh6Q02566 1938 aaKnown RBP16.07■□□□□ 0.16
Lime1-201ENSMUST00000048077 Znfx1Q8R151 1909 aaKnown RBP16.07■□□□□ 0.16
Lime1-201ENSMUST00000048077 Mtx1P47802 317 aa16.07■□□□□ 0.16
Lime1-201ENSMUST00000048077 Llgl2Q3TJ91 1027 aa16.07■□□□□ 0.16
Lime1-201ENSMUST00000048077 Agtpbp1Q641K1 1218 aa16.07■□□□□ 0.16
Lime1-201ENSMUST00000048077 Cep135Q6P5D4 1140 aa16.07■□□□□ 0.16
Lime1-201ENSMUST00000048077 Slf2Q6P9P0 1278 aa16.07■□□□□ 0.16
Lime1-201ENSMUST00000048077 Rnf41Q8BH75 317 aa16.07■□□□□ 0.16
Lime1-201ENSMUST00000048077 Olfm5Q8BU90 496 aa16.07■□□□□ 0.16
Lime1-201ENSMUST00000048077 Trim11Q99PQ2 467 aa16.07■□□□□ 0.16
Lime1-201ENSMUST00000048077 Nek3Q9R0A5 511 aa16.07■□□□□ 0.16
Lime1-201ENSMUST00000048077 Mast2Q60592 1734 aa16.07■□□□□ 0.16
Lime1-201ENSMUST00000048077 GabrdP22933 449 aa16.06■□□□□ 0.16
Lime1-201ENSMUST00000048077 Gpatch11Q3UFS4 262 aa16.06■□□□□ 0.16
Lime1-201ENSMUST00000048077 Ankrd23Q812A3 306 aa16.06■□□□□ 0.16
Lime1-201ENSMUST00000048077 Ccdc150Q8CDI7 1110 aa16.06■□□□□ 0.16
Lime1-201ENSMUST00000048077 Q8K2W9 541 aa16.06■□□□□ 0.16
Lime1-201ENSMUST00000048077 IcoslgQ9JHJ8 322 aa16.06■□□□□ 0.16
Lime1-201ENSMUST00000048077 Grin2dQ03391 1323 aa16.06■□□□□ 0.16
Lime1-201ENSMUST00000048077 Panx2Q6IMP4 677 aa16.06■□□□□ 0.16
Lime1-201ENSMUST00000048077 Ppp2r5bQ6PD28 497 aa16.06■□□□□ 0.16
Lime1-201ENSMUST00000048077 Arid5bQ8BM75 1188 aaKnown RBP16.06■□□□□ 0.16
Lime1-201ENSMUST00000048077 SowahdQ8BY98 327 aa16.06■□□□□ 0.16
Lime1-201ENSMUST00000048077 Ufl1Q8CCJ3 793 aaKnown RBP16.06■□□□□ 0.16
Lime1-201ENSMUST00000048077 Cnpy3Q9DAU1 276 aa16.06■□□□□ 0.16
Lime1-201ENSMUST00000048077 Ccdc121E9Q6D3 323 aa16.05■□□□□ 0.16
Lime1-201ENSMUST00000048077 Dapk3O54784 448 aa16.05■□□□□ 0.16
Lime1-201ENSMUST00000048077 Arhgef16Q3U5C8 713 aa16.05■□□□□ 0.16
Lime1-201ENSMUST00000048077 PsdQ5DTT2 1024 aa16.05■□□□□ 0.16
Lime1-201ENSMUST00000048077 Abcf1Q6P542 837 aaKnown RBP16.05■□□□□ 0.16
Lime1-201ENSMUST00000048077 Ube3cQ80U95 1083 aa16.05■□□□□ 0.16
Lime1-201ENSMUST00000048077 Lmod1Q8BVA4 595 aa16.05■□□□□ 0.16
Lime1-201ENSMUST00000048077 Tubb4aQ9D6F9 444 aa16.05■□□□□ 0.16
Lime1-201ENSMUST00000048077 Snapc4Q8BP86 1333 aa16.05■□□□□ 0.16
Lime1-201ENSMUST00000048077 Jakmip2D3YXK0 820 aa16.04■□□□□ 0.16
Lime1-201ENSMUST00000048077 Prl7d1P04769 244 aa16.04■□□□□ 0.16
Lime1-201ENSMUST00000048077 Surf1P09925 306 aa16.04■□□□□ 0.16
Lime1-201ENSMUST00000048077 Vps33bP59016 617 aa16.04■□□□□ 0.16
Lime1-201ENSMUST00000048077 Rtkn2Q14B46 604 aa16.04■□□□□ 0.16
Lime1-201ENSMUST00000048077 Tmem143Q8VD26 458 aa16.04■□□□□ 0.16
Lime1-201ENSMUST00000048077 WtapQ9ER69 396 aa16.04■□□□□ 0.16
Lime1-201ENSMUST00000048077 Tbc1d8bA3KGB4 1114 aa16.04■□□□□ 0.16
Lime1-201ENSMUST00000048077 Ube4aE9Q735 1028 aa16.04■□□□□ 0.16
Lime1-201ENSMUST00000048077 Slc4a4O88343 1079 aa16.04■□□□□ 0.16
Lime1-201ENSMUST00000048077 Q3TYL0 343 aa16.04■□□□□ 0.16
Lime1-201ENSMUST00000048077 Cdc37Q61081 379 aa16.04■□□□□ 0.16
Lime1-201ENSMUST00000048077 9230110C19RikQ8CC70 267 aa16.04■□□□□ 0.16
Lime1-201ENSMUST00000048077 Rtn1Q8K0T0 780 aa16.04■□□□□ 0.16
Lime1-201ENSMUST00000048077 AfdnQ9QZQ1 1820 aaKnown RBP16.03■□□□□ 0.16
Lime1-201ENSMUST00000048077 Dennd3A2RT67 1274 aa16.03■□□□□ 0.16
Lime1-201ENSMUST00000048077 Bin1O08539 588 aaKnown RBP16.03■□□□□ 0.16
Lime1-201ENSMUST00000048077 Slc7a3P70423 618 aa16.03■□□□□ 0.16
Lime1-201ENSMUST00000048077 Slc7a1Q09143 622 aa16.03■□□□□ 0.16
Lime1-201ENSMUST00000048077 Kcnh3Q9WVJ0 1095 aa16.03■□□□□ 0.16
Lime1-201ENSMUST00000048077 Plch1Q4KWH5 1682 aa16.02■□□□□ 0.16
Lime1-201ENSMUST00000048077 Nup98Q6PFD9 1816 aaKnown RBP16.02■□□□□ 0.16
Lime1-201ENSMUST00000048077 Ifit1bl2Q3U687 466 aa16.02■□□□□ 0.16
Lime1-201ENSMUST00000048077 TfrcQ62351 763 aaKnown RBP16.02■□□□□ 0.16
Lime1-201ENSMUST00000048077 Ddx54Q8K4L0 874 aaKnown RBP16.02■□□□□ 0.16
Lime1-201ENSMUST00000048077 Tspyl4Q8VD63 406 aa16.02■□□□□ 0.16
Lime1-201ENSMUST00000048077 Lrrc2Q8VDB8 371 aa16.02■□□□□ 0.16
Lime1-201ENSMUST00000048077 Ybx3Q9JKB3 361 aaKnown RBP16.02■□□□□ 0.16
Lime1-201ENSMUST00000048077 Myo3bQ1EG27 1305 aa16.02■□□□□ 0.16
Lime1-201ENSMUST00000048077 Izumo3A6PWV3 263 aa16.02■□□□□ 0.15
Lime1-201ENSMUST00000048077 Gas2l3Q3UWW6 683 aa16.02■□□□□ 0.15
Lime1-201ENSMUST00000048077 Prpf4bQ61136 1007 aaKnown RBP16.02■□□□□ 0.15
Lime1-201ENSMUST00000048077 Kiaa0754Q69ZZ9 979 aa16.02■□□□□ 0.15
Lime1-201ENSMUST00000048077 Haus7Q8BKT8 364 aa16.02■□□□□ 0.15
Lime1-201ENSMUST00000048077 Pm20d1Q8C165 503 aa16.02■□□□□ 0.15
Lime1-201ENSMUST00000048077 Smc2Q8CG48 1191 aaKnown RBP16.02■□□□□ 0.15
Lime1-201ENSMUST00000048077 Ccdc39Q9D5Y1 937 aa16.02■□□□□ 0.15
Lime1-201ENSMUST00000048077 Large1Q9Z1M7 756 aa16.02■□□□□ 0.15
Lime1-201ENSMUST00000048077 Fer1l6E0CZ42 1862 aa16.01■□□□□ 0.15
Lime1-201ENSMUST00000048077 Znf568E9PYI1 671 aa16.01■□□□□ 0.15
Lime1-201ENSMUST00000048077 Myl10Q62082 202 aa16.01■□□□□ 0.15
Lime1-201ENSMUST00000048077 Pram1Q6BCL1 675 aa16.01■□□□□ 0.15
Lime1-201ENSMUST00000048077 Suclg2Q9Z2I8 433 aa16.01■□□□□ 0.15
Lime1-201ENSMUST00000048077 Krt24A1L317 512 aa16■□□□□ 0.15
Lime1-201ENSMUST00000048077 1700029H14RikE9PY36 240 aa16■□□□□ 0.15
Lime1-201ENSMUST00000048077 Dctn1O08788 1281 aa16■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms