RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Ccdc91Q9D8L5 442 aa11.02□□□□□ -0.65
Syne1-201ENSMUST00000041639 Xpo4Q9ESJ0 1151 aa11.02□□□□□ -0.65
Syne1-201ENSMUST00000041639 Cyp2ab1S4R196 498 aa11.02□□□□□ -0.65
Syne1-201ENSMUST00000041639 TsksO54887 585 aa11.01□□□□□ -0.65
Syne1-201ENSMUST00000041639 Lrrc36Q3V0M2 755 aa11.01□□□□□ -0.65
Syne1-201ENSMUST00000041639 Kif22Q3V300 660 aa11.01□□□□□ -0.65
Syne1-201ENSMUST00000041639 Itga6Q61739 1091 aa11.01□□□□□ -0.65
Syne1-201ENSMUST00000041639 Zmynd15Q8C0R7 736 aa11.01□□□□□ -0.65
Syne1-201ENSMUST00000041639 Mettl5Q8K1A0 209 aa11.01□□□□□ -0.65
Syne1-201ENSMUST00000041639 Ets1P27577 440 aa11.01□□□□□ -0.65
Syne1-201ENSMUST00000041639 Psmc4P54775 418 aa11.01□□□□□ -0.65
Syne1-201ENSMUST00000041639 Q8BZJ8 459 aa11.01□□□□□ -0.65
Syne1-201ENSMUST00000041639 Gtpbp4Q99ME9 634 aaKnown RBP11.01□□□□□ -0.65
Syne1-201ENSMUST00000041639 Appbp2Q9DAX9 585 aa11.01□□□□□ -0.65
Syne1-201ENSMUST00000041639 Cib2Q9Z309 187 aa11.01□□□□□ -0.65
Syne1-201ENSMUST00000041639 Tbc1d2B1AVH7 922 aa11.01□□□□□ -0.65
Syne1-201ENSMUST00000041639 Gm4758L7N258 96 aa11.01□□□□□ -0.65
Syne1-201ENSMUST00000041639 PparaP23204 468 aa11.01□□□□□ -0.65
Syne1-201ENSMUST00000041639 Agbl1Q09M05 972 aa11.01□□□□□ -0.65
Syne1-201ENSMUST00000041639 Maip1Q8BHE8 291 aa11.01□□□□□ -0.65
Syne1-201ENSMUST00000041639 Eid1Q9DCR4 169 aa11.01□□□□□ -0.65
Syne1-201ENSMUST00000041639 Armc9Q9D2I5 817 aa11.01□□□□□ -0.65
Syne1-201ENSMUST00000041639 IqcdQ9D3V1 458 aa11.01□□□□□ -0.65
Syne1-201ENSMUST00000041639 Aox1O54754 1333 aa11.01□□□□□ -0.65
Syne1-201ENSMUST00000041639 Apol10bG3X9K7 334 aa11.01□□□□□ -0.65
Syne1-201ENSMUST00000041639 Ddb1Q3U1J4 1140 aaKnown RBP11.01□□□□□ -0.65
Syne1-201ENSMUST00000041639 SpopQ6ZWS8 374 aa11.01□□□□□ -0.65
Syne1-201ENSMUST00000041639 Prpf40bQ80W14 870 aa11.01□□□□□ -0.65
Syne1-201ENSMUST00000041639 Trim6Q8BGE7 488 aa11.01□□□□□ -0.65
Syne1-201ENSMUST00000041639 WizO88286 1684 aaKnown RBP11□□□□□ -0.65
Syne1-201ENSMUST00000041639 Pak1O88643 545 aa11□□□□□ -0.65
Syne1-201ENSMUST00000041639 Ankrd24Q80VM7 985 aa11□□□□□ -0.65
Syne1-201ENSMUST00000041639 Abcc4E9Q236 1325 aa11□□□□□ -0.65
Syne1-201ENSMUST00000041639 Gm2030D3Z7C4 212 aa11□□□□□ -0.65
Syne1-201ENSMUST00000041639 Eif6O55135 245 aa11□□□□□ -0.65
Syne1-201ENSMUST00000041639 Mtus1Q5HZI1 1210 aa11□□□□□ -0.65
Syne1-201ENSMUST00000041639 Clcn1Q64347 994 aa11□□□□□ -0.65
Syne1-201ENSMUST00000041639 Cfap100Q80VN0 613 aa11□□□□□ -0.65
Syne1-201ENSMUST00000041639 Kif2bQ8C0N1 668 aa11□□□□□ -0.65
Syne1-201ENSMUST00000041639 ByslO54825 436 aaKnown RBP11□□□□□ -0.65
Syne1-201ENSMUST00000041639 Atp6v0a2P15920 856 aa11□□□□□ -0.65
Syne1-201ENSMUST00000041639 Ccdc157Q5SPX1 718 aa11□□□□□ -0.65
Syne1-201ENSMUST00000041639 Sp4Q62445 782 aa11□□□□□ -0.65
Syne1-201ENSMUST00000041639 Hdac9Q99N13 588 aa11□□□□□ -0.65
Syne1-201ENSMUST00000041639 Sf3a3Q9D554 501 aaKnown RBP11□□□□□ -0.65
Syne1-201ENSMUST00000041639 Naa16Q9DBB4 864 aa11□□□□□ -0.65
Syne1-201ENSMUST00000041639 Erbb3Q61526 1339 aa11□□□□□ -0.65
Syne1-201ENSMUST00000041639 Exoc3l2D3YUP5 789 aa11□□□□□ -0.65
Syne1-201ENSMUST00000041639 Fchsd1Q6PFY1 688 aa11□□□□□ -0.65
Syne1-201ENSMUST00000041639 Vat1lQ80TB8 417 aa11□□□□□ -0.65
Syne1-201ENSMUST00000041639 Calml3Q9D6P8 149 aa11□□□□□ -0.65
Syne1-201ENSMUST00000041639 Ints8Q80V86 995 aa11□□□□□ -0.65
Syne1-201ENSMUST00000041639 Dhx38Q80X98 1228 aa11□□□□□ -0.65
Syne1-201ENSMUST00000041639 Spata16Q8C636 571 aa11□□□□□ -0.65
Syne1-201ENSMUST00000041639 Pcdhb5Q91XZ5 792 aa11□□□□□ -0.65
Syne1-201ENSMUST00000041639 Tnip1Q9WUU8 647 aa11□□□□□ -0.65
Syne1-201ENSMUST00000041639 Mx2Q9WVP9 655 aa11□□□□□ -0.65
Syne1-201ENSMUST00000041639 Zkscan5Q9Z1D8 819 aa11□□□□□ -0.65
Syne1-201ENSMUST00000041639 Adgrb2Q8CGM1 1561 aa11□□□□□ -0.65
Syne1-201ENSMUST00000041639 KaznQ69ZS8 779 aa11□□□□□ -0.65
Syne1-201ENSMUST00000041639 Kcnj14Q8JZN3 434 aa11□□□□□ -0.65
Syne1-201ENSMUST00000041639 Gpr161B2RPY5 545 aa10.99□□□□□ -0.65
Syne1-201ENSMUST00000041639 Krt13P08730 437 aa10.99□□□□□ -0.65
Syne1-201ENSMUST00000041639 Naa25Q8BWZ3 972 aa10.99□□□□□ -0.65
Syne1-201ENSMUST00000041639 PpanQ91YU8 470 aaKnown RBP10.99□□□□□ -0.65
Syne1-201ENSMUST00000041639 A0A1W2P7S8 802 aa10.99□□□□□ -0.65
Syne1-201ENSMUST00000041639 Arhgef2Q60875 985 aa10.99□□□□□ -0.65
Syne1-201ENSMUST00000041639 Cdc5lQ6A068 802 aaKnown RBP10.99□□□□□ -0.65
Syne1-201ENSMUST00000041639 Haus1Q8BHX1 278 aa10.99□□□□□ -0.65
Syne1-201ENSMUST00000041639 Arhgef6Q8K4I3 771 aa10.99□□□□□ -0.65
Syne1-201ENSMUST00000041639 Otud7bB2RUR8 840 aa10.99□□□□□ -0.65
Syne1-201ENSMUST00000041639 Krt8P11679 490 aaKnown RBP10.99□□□□□ -0.65
Syne1-201ENSMUST00000041639 Ifit1Q64282 463 aa10.99□□□□□ -0.65
Syne1-201ENSMUST00000041639 Prr29B1ARI9 187 aa10.99□□□□□ -0.65
Syne1-201ENSMUST00000041639 Dnajc21E9Q8D0 531 aa10.99□□□□□ -0.65
Syne1-201ENSMUST00000041639 Mapkapk5O54992 473 aa10.99□□□□□ -0.65
Syne1-201ENSMUST00000041639 Atp2a2O55143 1044 aaKnown RBP10.99□□□□□ -0.65
Syne1-201ENSMUST00000041639 Tom1O88746 492 aa10.99□□□□□ -0.65
Syne1-201ENSMUST00000041639 Akr1b8P45377 316 aa10.99□□□□□ -0.65
Syne1-201ENSMUST00000041639 S100bP50114 92 aa10.99□□□□□ -0.65
Syne1-201ENSMUST00000041639 Map3k19E9Q3S4 1311 aa10.99□□□□□ -0.65
Syne1-201ENSMUST00000041639 Gpbp1Q6NXH3 473 aaKnown RBP10.99□□□□□ -0.65
Syne1-201ENSMUST00000041639 Rab44Q8CB87 725 aa10.99□□□□□ -0.65
Syne1-201ENSMUST00000041639 Tekt2Q922G7 430 aa10.99□□□□□ -0.65
Syne1-201ENSMUST00000041639 Ccnt1Q9QWV9 724 aaKnown RBP10.99□□□□□ -0.65
Syne1-201ENSMUST00000041639 Mroh7A2AVR2 1279 aa10.98□□□□□ -0.65
Syne1-201ENSMUST00000041639 Anxa1P10107 346 aaKnown RBP10.98□□□□□ -0.65
Syne1-201ENSMUST00000041639 Ccdc129Q14B48 1034 aa10.98□□□□□ -0.65
Syne1-201ENSMUST00000041639 Rexo1Q7TT28 1213 aa10.98□□□□□ -0.65
Syne1-201ENSMUST00000041639 Nod2Q8K3Z0 1020 aa10.98□□□□□ -0.65
Syne1-201ENSMUST00000041639 Abcc6Q9R1S7 1498 aa10.98□□□□□ -0.65
Syne1-201ENSMUST00000041639 Prl3d2F6R3P9 224 aa10.98□□□□□ -0.65
Syne1-201ENSMUST00000041639 Parp1P11103 1013 aaKnown RBP10.98□□□□□ -0.65
Syne1-201ENSMUST00000041639 Traf3ip3Q8C0G2 513 aa10.98□□□□□ -0.65
Syne1-201ENSMUST00000041639 Asic2Q925H0 512 aa10.98□□□□□ -0.65
Syne1-201ENSMUST00000041639 Edc4Q3UJB9 1406 aaKnown RBP10.98□□□□□ -0.65
Syne1-201ENSMUST00000041639 Igsf3Q6ZQA6 1194 aa10.98□□□□□ -0.65
Syne1-201ENSMUST00000041639 Acsl3Q9CZW4 720 aaKnown RBP10.98□□□□□ -0.65
Syne1-201ENSMUST00000041639 Fsip1Q9D3V5 435 aa10.98□□□□□ -0.65
Syne1-201ENSMUST00000041639 Tfcp2Q9ERA0 502 aa10.98□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 71.1 ms